RNA–Protein interactions for RNA: ENST00000588016.1

CLASRP-209, Transcript of CLK4 associating serine/arginine rich protein, humanhuman

TSL 2

Gene CLASRP, Length 967 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASRP-209ENST00000588016 DUSP27Q5VZP5 1158 aa12.22□□□□□ -0.45
CLASRP-209ENST00000588016 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
CLASRP-209ENST00000588016 WNK3Q9BYP7 1800 aa12.22□□□□□ -0.45
CLASRP-209ENST00000588016 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.45
CLASRP-209ENST00000588016 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.45
CLASRP-209ENST00000588016 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
CLASRP-209ENST00000588016 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
CLASRP-209ENST00000588016 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
CLASRP-209ENST00000588016 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
CLASRP-209ENST00000588016 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
CLASRP-209ENST00000588016 FAM196AQ6ZSG2 479 aa12.2□□□□□ -0.46
CLASRP-209ENST00000588016 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
CLASRP-209ENST00000588016 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
CLASRP-209ENST00000588016 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
CLASRP-209ENST00000588016 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
CLASRP-209ENST00000588016 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
CLASRP-209ENST00000588016 CT47B1P0C2W7 299 aaPredicted RBP12.18□□□□□ -0.46
CLASRP-209ENST00000588016 EXOSC9Q06265 439 aaKnown RBP12.18□□□□□ -0.46
CLASRP-209ENST00000588016 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
CLASRP-209ENST00000588016 PIGBQ92521 554 aa12.18□□□□□ -0.46
CLASRP-209ENST00000588016 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
CLASRP-209ENST00000588016 EIF4A1P60842 406 aaKnown RBP12.16□□□□□ -0.46
CLASRP-209ENST00000588016 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
CLASRP-209ENST00000588016 FAM182BQ5T319 152 aa12.16□□□□□ -0.46
CLASRP-209ENST00000588016 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
CLASRP-209ENST00000588016 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.46
CLASRP-209ENST00000588016 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
CLASRP-209ENST00000588016 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
CLASRP-209ENST00000588016 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
CLASRP-209ENST00000588016 ZNF428Q96B54 188 aa12.15□□□□□ -0.46
CLASRP-209ENST00000588016 FMNL2Q96PY5 1086 aa12.15□□□□□ -0.46
CLASRP-209ENST00000588016 RCAN3Q9UKA8 241 aa12.15□□□□□ -0.46
CLASRP-209ENST00000588016 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
CLASRP-209ENST00000588016 LRRC37A3O60309 1634 aa12.15□□□□□ -0.47
CLASRP-209ENST00000588016 BCL9O00512 1426 aa12.14□□□□□ -0.47
CLASRP-209ENST00000588016 KCNQ3O43525 872 aa12.14□□□□□ -0.47
CLASRP-209ENST00000588016 KCNQ2O43526 872 aa12.14□□□□□ -0.47
CLASRP-209ENST00000588016 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
CLASRP-209ENST00000588016 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
CLASRP-209ENST00000588016 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
CLASRP-209ENST00000588016 VAMP4O75379 141 aa12.13□□□□□ -0.47
CLASRP-209ENST00000588016 HOXB7P09629 217 aa12.13□□□□□ -0.47
CLASRP-209ENST00000588016 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
CLASRP-209ENST00000588016 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
CLASRP-209ENST00000588016 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
CLASRP-209ENST00000588016 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
CLASRP-209ENST00000588016 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
CLASRP-209ENST00000588016 MRC1P22897 1456 aa12.13□□□□□ -0.47
CLASRP-209ENST00000588016 SBF2Q86WG5 1849 aa12.12□□□□□ -0.47
CLASRP-209ENST00000588016 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
CLASRP-209ENST00000588016 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
CLASRP-209ENST00000588016 TSPYL6Q8N831 410 aa12.12□□□□□ -0.47
CLASRP-209ENST00000588016 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
CLASRP-209ENST00000588016 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
CLASRP-209ENST00000588016 ALDH1L2Q3SY69 923 aa12.11□□□□□ -0.47
CLASRP-209ENST00000588016 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
CLASRP-209ENST00000588016 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
CLASRP-209ENST00000588016 TRIM37O94972 964 aa12.1□□□□□ -0.47
CLASRP-209ENST00000588016 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
CLASRP-209ENST00000588016 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
CLASRP-209ENST00000588016 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
CLASRP-209ENST00000588016 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
CLASRP-209ENST00000588016 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
CLASRP-209ENST00000588016 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CLASRP-209ENST00000588016 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
CLASRP-209ENST00000588016 HEG1Q9ULI3 1381 aa12.09□□□□□ -0.47
CLASRP-209ENST00000588016 STARD3NLO95772 234 aa12.09□□□□□ -0.47
CLASRP-209ENST00000588016 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
CLASRP-209ENST00000588016 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
CLASRP-209ENST00000588016 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
CLASRP-209ENST00000588016 APBA3O96018 575 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
CLASRP-209ENST00000588016 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 SIK1P57059 783 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 SF3B2Q13435 895 aaKnown RBP12.07□□□□□ -0.48
CLASRP-209ENST00000588016 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 NECTIN2Q92692 538 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 DBF4Q9UBU7 674 aaPredicted RBP12.07□□□□□ -0.48
CLASRP-209ENST00000588016 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
CLASRP-209ENST00000588016 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
CLASRP-209ENST00000588016 RREB1Q92766 1687 aa12.06□□□□□ -0.48
CLASRP-209ENST00000588016 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
CLASRP-209ENST00000588016 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
CLASRP-209ENST00000588016 BCAR3O75815 825 aa12.06□□□□□ -0.48
CLASRP-209ENST00000588016 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
CLASRP-209ENST00000588016 PRAMEF22A3QJZ6 481 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
CLASRP-209ENST00000588016 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
CLASRP-209ENST00000588016 CCDC125Q86Z20 511 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
CLASRP-209ENST00000588016 FRAT1Q92837 279 aaPredicted RBP12.05□□□□□ -0.48
CLASRP-209ENST00000588016 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
CLASRP-209ENST00000588016 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms