RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 BACH1O14867 736 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 FOXO3O43524 673 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 MAPK1P28482 360 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 SCNN1DP51172 638 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 GDF10P55107 478 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
TUBD1-208ENST00000588009 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 SPRYD7Q5W111 196 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 TNS4Q8IZW8 715 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 SCG3Q8WXD2 468 aaKnown RBP8.91□□□□□ -0.98
TUBD1-208ENST00000588009 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 CDK15Q96Q40 435 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 TMPRSS4Q9NRS4 437 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 DCTN4Q9UJW0 460 aa8.91□□□□□ -0.98
TUBD1-208ENST00000588009 ATAD2Q6PL18 1390 aa8.9□□□□□ -0.98
TUBD1-208ENST00000588009 STAU1O95793 577 aaKnown RBP8.9□□□□□ -0.98
TUBD1-208ENST00000588009 RPIAP49247 311 aa8.9□□□□□ -0.98
TUBD1-208ENST00000588009 ZNF326Q5BKZ1 582 aaKnown RBP8.9□□□□□ -0.98
TUBD1-208ENST00000588009 EHBP1Q8NDI1 1231 aa8.9□□□□□ -0.98
TUBD1-208ENST00000588009 ASB16Q96NS5 453 aa8.9□□□□□ -0.98
TUBD1-208ENST00000588009 IGSF3O75054 1194 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 INHAP05111 366 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 GRM5P41594 1212 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 PRR20EP86478 221 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 PRR20CP86479 221 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 PRR20DP86480 221 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 PRR20BP86481 221 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 PRR20AP86496 221 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 DHX9Q08211 1270 aaKnown RBP8.89□□□□□ -0.99
TUBD1-208ENST00000588009 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
TUBD1-208ENST00000588009 DGAT1O75907 488 aa8.88□□□□□ -0.99
TUBD1-208ENST00000588009 NPR3P17342 541 aa8.88□□□□□ -0.99
TUBD1-208ENST00000588009 EPHA4P54764 986 aa8.88□□□□□ -0.99
TUBD1-208ENST00000588009 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
TUBD1-208ENST00000588009 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
TUBD1-208ENST00000588009 ZSCAN29Q8IWY8 852 aaPredicted RBP8.88□□□□□ -0.99
TUBD1-208ENST00000588009 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
TUBD1-208ENST00000588009 LCE2BO14633 110 aa8.87□□□□□ -0.99
TUBD1-208ENST00000588009 CD2BP2O95400 341 aaKnown RBP8.87□□□□□ -0.99
TUBD1-208ENST00000588009 FSHRP23945 695 aa8.87□□□□□ -0.99
TUBD1-208ENST00000588009 FBXO33Q7Z6M2 555 aa8.87□□□□□ -0.99
TUBD1-208ENST00000588009 MPNDQ8N594 471 aa8.87□□□□□ -0.99
TUBD1-208ENST00000588009 SLC4A9Q96Q91 983 aa8.87□□□□□ -0.99
TUBD1-208ENST00000588009 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
TUBD1-208ENST00000588009 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
TUBD1-208ENST00000588009 FAM13AO94988 1023 aa8.86□□□□□ -0.99
TUBD1-208ENST00000588009 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
TUBD1-208ENST00000588009 ZNF787Q6DD87 383 aa8.86□□□□□ -0.99
TUBD1-208ENST00000588009 ZNF784Q8NCA9 323 aaPredicted RBP8.86□□□□□ -0.99
TUBD1-208ENST00000588009 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
TUBD1-208ENST00000588009 LILRA1O75019 489 aa8.85□□□□□ -0.99
TUBD1-208ENST00000588009 GNRH1P01148 92 aa8.85□□□□□ -0.99
TUBD1-208ENST00000588009 MYT1Q01538 1121 aa8.85□□□□□ -0.99
TUBD1-208ENST00000588009 COL19A1Q14993 1142 aa8.85□□□□□ -0.99
TUBD1-208ENST00000588009 CHMP7Q8WUX9 453 aaPredicted RBP8.85□□□□□ -0.99
TUBD1-208ENST00000588009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.85□□□□□ -0.99
TUBD1-208ENST00000588009 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
TUBD1-208ENST00000588009 SIAH2O43255 324 aa8.84□□□□□ -0.99
TUBD1-208ENST00000588009 PPP1R12BO60237 982 aaPredicted RBP8.84□□□□□ -0.99
TUBD1-208ENST00000588009 TAGLNQ01995 201 aaKnown RBP8.84□□□□□ -0.99
TUBD1-208ENST00000588009 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
TUBD1-208ENST00000588009 CYP2U1Q7Z449 544 aa8.84□□□□□ -0.99
TUBD1-208ENST00000588009 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
TUBD1-208ENST00000588009 RGL4Q8IZJ4 473 aa8.84□□□□□ -0.99
TUBD1-208ENST00000588009 TLL2Q9Y6L7 1015 aa8.84□□□□□ -0.99
TUBD1-208ENST00000588009 ADD1P35611 737 aaKnown RBP8.83□□□□□ -1
TUBD1-208ENST00000588009 FOXK2Q01167 660 aa8.83□□□□□ -1
TUBD1-208ENST00000588009 LIAT1Q6ZQX7 453 aa8.83□□□□□ -1
TUBD1-208ENST00000588009 TRIM67Q6ZTA4 783 aa8.83□□□□□ -1
TUBD1-208ENST00000588009 SAP130Q9H0E3 1048 aa8.83□□□□□ -1
TUBD1-208ENST00000588009 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
TUBD1-208ENST00000588009 A6NJY4 79 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 ADH1CP00326 375 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 VAMP1P23763 118 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 MPSTP25325 297 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 SMTNP53814 917 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 NR5A1Q13285 461 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 C16orf46Q6P387 395 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
TUBD1-208ENST00000588009 LOC105371045A0A1W2PR82 267 aa8.81□□□□□ -1
TUBD1-208ENST00000588009 MTFR1Q15390 333 aa8.81□□□□□ -1
TUBD1-208ENST00000588009 TBCELQ5QJ74 424 aa8.81□□□□□ -1
TUBD1-208ENST00000588009 SLC9A9Q8IVB4 645 aa8.81□□□□□ -1
TUBD1-208ENST00000588009 EMID1Q96A84 441 aaPredicted RBP8.81□□□□□ -1
TUBD1-208ENST00000588009 XAGE2Q96GT9 111 aa8.81□□□□□ -1
TUBD1-208ENST00000588009 C2orf49Q9BVC5 232 aaPredicted RBP8.81□□□□□ -1
TUBD1-208ENST00000588009 RBCK1Q9BYM8 510 aa8.81□□□□□ -1
TUBD1-208ENST00000588009 EAPPQ56P03 285 aaPredicted RBP8.8□□□□□ -1
TUBD1-208ENST00000588009 GDF9O60383 454 aa8.79□□□□□ -1
TUBD1-208ENST00000588009 TCF3P15923 654 aa8.79□□□□□ -1
TUBD1-208ENST00000588009 COX20Q5RI15 118 aa8.79□□□□□ -1
TUBD1-208ENST00000588009 TMC7Q7Z402 723 aa8.79□□□□□ -1
TUBD1-208ENST00000588009 RAB6BQ9NRW1 208 aa8.79□□□□□ -1
TUBD1-208ENST00000588009 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
TUBD1-208ENST00000588009 FAM187AA6NFU0 413 aa8.78□□□□□ -1
TUBD1-208ENST00000588009 CDK2AP1O14519 115 aa8.78□□□□□ -1
TUBD1-208ENST00000588009 NDUFB5O43674 189 aa8.78□□□□□ -1
TUBD1-208ENST00000588009 NR3C2P08235 984 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms