RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MCTP1Q6DN14 999 aa22.72■■□□□ 1.23
DDX39A-206ENST00000587730 OTUD7AQ8TE49 926 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-206ENST00000587730 PXDNLA1KZ92 1463 aa22.72■■□□□ 1.23
DDX39A-206ENST00000587730 CCDC30Q5VVM6 783 aa22.71■■□□□ 1.23
DDX39A-206ENST00000587730 IL17RAQ96F46 866 aa22.71■■□□□ 1.23
DDX39A-206ENST00000587730 LMBRD1Q9NUN5 540 aa22.71■■□□□ 1.23
DDX39A-206ENST00000587730 IGSF1Q8N6C5 1336 aa22.71■■□□□ 1.23
DDX39A-206ENST00000587730 CHMP4AQ9BY43 222 aa22.71■■□□□ 1.23
DDX39A-206ENST00000587730 LRRCC1Q9C099 1032 aa22.71■■□□□ 1.23
DDX39A-206ENST00000587730 MAP3K19Q56UN5 1328 aa22.7■■□□□ 1.22
DDX39A-206ENST00000587730 FMN2Q9NZ56 1722 aa22.7■■□□□ 1.22
DDX39A-206ENST00000587730 SMARCA5O60264 1052 aaPredicted RBP22.7■■□□□ 1.22
DDX39A-206ENST00000587730 MBD3O95983 291 aa22.69■■□□□ 1.22
DDX39A-206ENST00000587730 ZNF142P52746 1687 aaPredicted RBP22.69■■□□□ 1.22
DDX39A-206ENST00000587730 MTHFSDQ2M296 383 aaKnown RBP22.68■■□□□ 1.22
DDX39A-206ENST00000587730 INTS4Q96HW7 963 aaKnown RBP22.68■■□□□ 1.22
DDX39A-206ENST00000587730 LRRC37A3O60309 1634 aa22.68■■□□□ 1.22
DDX39A-206ENST00000587730 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
DDX39A-206ENST00000587730 ZSCAN30Q86W11 494 aa22.68■■□□□ 1.22
DDX39A-206ENST00000587730 STAP2Q9UGK3 403 aa22.68■■□□□ 1.22
DDX39A-206ENST00000587730 ZSCAN23Q3MJ62 389 aa22.67■■□□□ 1.22
DDX39A-206ENST00000587730 SLC4A10Q6U841 1118 aa22.67■■□□□ 1.22
DDX39A-206ENST00000587730 FBXO41Q8TF61 875 aa22.67■■□□□ 1.22
DDX39A-206ENST00000587730 ATP8B2P98198 1209 aa22.66■■□□□ 1.22
DDX39A-206ENST00000587730 ESYT1Q9BSJ8 1104 aa22.66■■□□□ 1.22
DDX39A-206ENST00000587730 MX1P20591 662 aa22.66■■□□□ 1.22
DDX39A-206ENST00000587730 APBB1O00213 710 aa22.65■■□□□ 1.22
DDX39A-206ENST00000587730 CUL4AQ13619 759 aa22.65■■□□□ 1.22
DDX39A-206ENST00000587730 TPM2P07951 284 aa22.64■■□□□ 1.22
DDX39A-206ENST00000587730 AMPHP49418 695 aa22.64■■□□□ 1.22
DDX39A-206ENST00000587730 FLIIQ13045 1269 aa22.64■■□□□ 1.22
DDX39A-206ENST00000587730 EID1Q9Y6B2 187 aa22.64■■□□□ 1.22
DDX39A-206ENST00000587730 N4BP2Q86UW6 1770 aaPredicted RBP22.64■■□□□ 1.21
DDX39A-206ENST00000587730 CAVIN1Q6NZI2 390 aaKnown RBP22.64■■□□□ 1.21
DDX39A-206ENST00000587730 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
DDX39A-206ENST00000587730 GNAT3A8MTJ3 354 aa22.63■■□□□ 1.21
DDX39A-206ENST00000587730 ERBB4Q15303 1308 aa22.63■■□□□ 1.21
DDX39A-206ENST00000587730 DIP2AQ14689 1571 aa22.62■■□□□ 1.21
DDX39A-206ENST00000587730 SLIT1O75093 1534 aa22.62■■□□□ 1.21
DDX39A-206ENST00000587730 ANKARQ7Z5J8 1434 aa22.62■■□□□ 1.21
DDX39A-206ENST00000587730 NEK4P51957 841 aa22.62■■□□□ 1.21
DDX39A-206ENST00000587730 G2E3Q7L622 706 aa22.62■■□□□ 1.21
DDX39A-206ENST00000587730 UBE2Q2Q8WVN8 375 aa22.62■■□□□ 1.21
DDX39A-206ENST00000587730 RAB11FIP3O75154 756 aa22.61■■□□□ 1.21
DDX39A-206ENST00000587730 PRKCSHP14314 528 aaPredicted RBP22.61■■□□□ 1.21
DDX39A-206ENST00000587730 NCLP19338 710 aaKnown RBP22.61■■□□□ 1.21
DDX39A-206ENST00000587730 MSNP26038 577 aaKnown RBP22.61■■□□□ 1.21
DDX39A-206ENST00000587730 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
DDX39A-206ENST00000587730 SYAP1Q96A49 352 aaPredicted RBP22.61■■□□□ 1.21
DDX39A-206ENST00000587730 TMX3Q96JJ7 454 aa22.61■■□□□ 1.21
DDX39A-206ENST00000587730 CACNA1FO60840 1977 aa22.61■■□□□ 1.21
DDX39A-206ENST00000587730 FAM208AQ9UK61 1670 aaKnown RBP22.61■■□□□ 1.21
DDX39A-206ENST00000587730 TBX22Q9Y458 520 aa22.61■■□□□ 1.21
DDX39A-206ENST00000587730 F6X3S4 739 aa22.6■■□□□ 1.21
DDX39A-206ENST00000587730 TERF1P54274 439 aa22.6■■□□□ 1.21
DDX39A-206ENST00000587730 ZGPATQ8N5A5 531 aaKnown RBP22.6■■□□□ 1.21
DDX39A-206ENST00000587730 EYA1Q99502 592 aa22.6■■□□□ 1.21
DDX39A-206ENST00000587730 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
DDX39A-206ENST00000587730 RRP9O43818 475 aaKnown RBP22.59■■□□□ 1.21
DDX39A-206ENST00000587730 PRPF40AO75400 957 aaKnown RBP22.59■■□□□ 1.21
DDX39A-206ENST00000587730 CHMLP26374 656 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 LTKP29376 864 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 MCM5P33992 734 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 MAP3K5Q99683 1374 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 BRD1O95696 1058 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 NGDNQ8NEJ9 315 aaKnown RBP22.59■■□□□ 1.21
DDX39A-206ENST00000587730 PDLIM2Q96JY6 352 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 EXOC6BQ9Y2D4 811 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 ZDHHC9Q9Y397 364 aa22.59■■□□□ 1.21
DDX39A-206ENST00000587730 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
DDX39A-206ENST00000587730 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
DDX39A-206ENST00000587730 LRSAM1Q6UWE0 723 aa22.58■■□□□ 1.21
DDX39A-206ENST00000587730 MIS18AQ9NYP9 233 aa22.58■■□□□ 1.21
DDX39A-206ENST00000587730 TUBGCP6Q96RT7 1819 aa22.57■■□□□ 1.2
DDX39A-206ENST00000587730 FOXO3O43524 673 aa22.57■■□□□ 1.2
DDX39A-206ENST00000587730 GLIPR1L2Q4G1C9 344 aa22.57■■□□□ 1.2
DDX39A-206ENST00000587730 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.57■■□□□ 1.2
DDX39A-206ENST00000587730 PHF14O94880 888 aa22.57■■□□□ 1.2
DDX39A-206ENST00000587730 PKP1Q13835 747 aa22.57■■□□□ 1.2
DDX39A-206ENST00000587730 TAF7Q15545 349 aaPredicted RBP22.57■■□□□ 1.2
DDX39A-206ENST00000587730 UBTFL1P0CB47 393 aaPredicted RBP22.56■■□□□ 1.2
DDX39A-206ENST00000587730 TRIM6-TRIM34B2RNG4 842 aa22.55■■□□□ 1.2
DDX39A-206ENST00000587730 HOXB7P09629 217 aa22.55■■□□□ 1.2
DDX39A-206ENST00000587730 GPT2Q8TD30 523 aa22.55■■□□□ 1.2
DDX39A-206ENST00000587730 ANO2Q9NQ90 1003 aa22.55■■□□□ 1.2
DDX39A-206ENST00000587730 HSP90AB4PQ58FF6 505 aa22.54■■□□□ 1.2
DDX39A-206ENST00000587730 SSH3Q8TE77 659 aa22.54■■□□□ 1.2
DDX39A-206ENST00000587730 AMOTL2Q9Y2J4 779 aa22.54■■□□□ 1.2
DDX39A-206ENST00000587730 OFD1O75665 1012 aa22.54■■□□□ 1.2
DDX39A-206ENST00000587730 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
DDX39A-206ENST00000587730 NOL7Q9UMY1 257 aaKnown RBP22.53■■□□□ 1.2
DDX39A-206ENST00000587730 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
DDX39A-206ENST00000587730 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
DDX39A-206ENST00000587730 RBSNQ9H1K0 784 aa22.52■■□□□ 1.2
DDX39A-206ENST00000587730 PNMA6EA0A0J9YXQ4 647 aa22.52■■□□□ 1.2
DDX39A-206ENST00000587730 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
DDX39A-206ENST00000587730 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
DDX39A-206ENST00000587730 SOX12O15370 315 aa22.51■■□□□ 1.19
DDX39A-206ENST00000587730 ZNF500O60304 480 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms