RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 MSH6P52701 1360 aa16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 PRDM15P57071 1507 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 CDK11BP21127 795 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 CREBRFQ8IUR6 639 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 MAP3K19Q56UN5 1328 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 IL16Q14005 1332 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-209ENST00000587525 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
CACNA1A-209ENST00000587525 TSPY26PQ9H489 355 aa16.52■□□□□ 0.24
CACNA1A-209ENST00000587525 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-209ENST00000587525 CROCC2H7BZ55 1655 aa16.52■□□□□ 0.24
CACNA1A-209ENST00000587525 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
CACNA1A-209ENST00000587525 CWF19L2Q2TBE0 894 aaKnown RBP16.52■□□□□ 0.23
CACNA1A-209ENST00000587525 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 CKAP2LQ8IYA6 745 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 TSPOAP1O95153 1857 aa16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-209ENST00000587525 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 YEATS2Q9ULM3 1422 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 RAPGEF4Q8WZA2 1011 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 RBSNQ9H1K0 784 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 PDCL3Q9H2J4 239 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
CACNA1A-209ENST00000587525 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 KCNQ3O43525 872 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 APPP05067 770 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 LARP1BQ659C4 914 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 SYNMO15061 1565 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 RBM25P49756 843 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 NSD2O96028 1365 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
CACNA1A-209ENST00000587525 PHF14O94880 888 aa16.48■□□□□ 0.23
CACNA1A-209ENST00000587525 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
CACNA1A-209ENST00000587525 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
CACNA1A-209ENST00000587525 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 NEO1Q92859 1461 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 NBPF7P0C2Y1 421 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 ARHGAP45Q92619 1136 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 PDRG1Q9NUG6 133 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 ZFYVE16Q7Z3T8 1539 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 ZBTB9Q96C00 473 aa16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 TTC12Q9H892 705 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-209ENST00000587525 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
CACNA1A-209ENST00000587525 BECN2A8MW95 431 aa16.46■□□□□ 0.23
CACNA1A-209ENST00000587525 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
CACNA1A-209ENST00000587525 SNX21Q969T3 373 aa16.46■□□□□ 0.23
CACNA1A-209ENST00000587525 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.22
CACNA1A-209ENST00000587525 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.22
CACNA1A-209ENST00000587525 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
CACNA1A-209ENST00000587525 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
CACNA1A-209ENST00000587525 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
CACNA1A-209ENST00000587525 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
CACNA1A-209ENST00000587525 MBD3O95983 291 aa16.45■□□□□ 0.22
CACNA1A-209ENST00000587525 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
CACNA1A-209ENST00000587525 USP48Q86UV5 1035 aa16.44■□□□□ 0.22
CACNA1A-209ENST00000587525 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-209ENST00000587525 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-209ENST00000587525 SNRKQ9NRH2 765 aa16.44■□□□□ 0.22
CACNA1A-209ENST00000587525 ATP6V1DQ9Y5K8 247 aa16.44■□□□□ 0.22
CACNA1A-209ENST00000587525 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 MYD88Q99836 296 aa16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 RIMS2Q9UQ26 1411 aa16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 CHL1O00533 1208 aa16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-209ENST00000587525 LTKP29376 864 aa16.42■□□□□ 0.22
CACNA1A-209ENST00000587525 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms