RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 POLD1P28340 1107 aa15.62■□□□□ 0.09
PRKCSH-206ENST00000587509 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
PRKCSH-206ENST00000587509 ASAP1Q9ULH1 1129 aa15.62■□□□□ 0.09
PRKCSH-206ENST00000587509 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
PRKCSH-206ENST00000587509 MSH5O43196 834 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 FCHSD2O94868 740 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 ATP6V1AP38606 617 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 MTHFSDQ2M296 383 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 SLC52A2Q9HAB3 445 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 ATG3Q9NT62 314 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 PNPLA7Q6ZV29 1317 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 TAF1LQ8IZX4 1826 aa15.61■□□□□ 0.09
PRKCSH-206ENST00000587509 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
PRKCSH-206ENST00000587509 KCNQ4P56696 695 aa15.6■□□□□ 0.09
PRKCSH-206ENST00000587509 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
PRKCSH-206ENST00000587509 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
PRKCSH-206ENST00000587509 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 RNMTO43148 476 aaKnown RBP15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 SSFA2P28290 1259 aa15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 TEFQ10587 303 aa15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 ADAMTS7Q9UKP4 1686 aa15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 TUBGCP6Q96RT7 1819 aa15.59■□□□□ 0.09
PRKCSH-206ENST00000587509 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.08
PRKCSH-206ENST00000587509 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.08
PRKCSH-206ENST00000587509 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
PRKCSH-206ENST00000587509 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
PRKCSH-206ENST00000587509 PDGFDQ9GZP0 370 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-206ENST00000587509 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-206ENST00000587509 GNPATO15228 680 aa15.56■□□□□ 0.08
PRKCSH-206ENST00000587509 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
PRKCSH-206ENST00000587509 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
PRKCSH-206ENST00000587509 PHF14O94880 888 aa15.55■□□□□ 0.08
PRKCSH-206ENST00000587509 ADRA2BP18089 450 aa15.55■□□□□ 0.08
PRKCSH-206ENST00000587509 LINC00116Q8NCU8 138 aa15.55■□□□□ 0.08
PRKCSH-206ENST00000587509 ARXQ96QS3 562 aa15.55■□□□□ 0.08
PRKCSH-206ENST00000587509 RTCBQ9Y3I0 505 aaKnown RBP15.55■□□□□ 0.08
PRKCSH-206ENST00000587509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.54■□□□□ 0.08
PRKCSH-206ENST00000587509 PTGER2P43116 358 aa15.54■□□□□ 0.08
PRKCSH-206ENST00000587509 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
PRKCSH-206ENST00000587509 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
PRKCSH-206ENST00000587509 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
PRKCSH-206ENST00000587509 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
PRKCSH-206ENST00000587509 ITPK1Q13572 414 aa15.53■□□□□ 0.08
PRKCSH-206ENST00000587509 WDR43Q15061 677 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRKCSH-206ENST00000587509 RC3H1Q5TC82 1133 aaKnown RBP15.53■□□□□ 0.08
PRKCSH-206ENST00000587509 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
PRKCSH-206ENST00000587509 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
PRKCSH-206ENST00000587509 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
PRKCSH-206ENST00000587509 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
PRKCSH-206ENST00000587509 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
PRKCSH-206ENST00000587509 SGIP1Q9BQI5 828 aa15.51■□□□□ 0.07
PRKCSH-206ENST00000587509 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
PRKCSH-206ENST00000587509 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
PRKCSH-206ENST00000587509 TRAPPC3LQ5T215 181 aa15.5■□□□□ 0.07
PRKCSH-206ENST00000587509 PRKRIP1Q9H875 184 aaPredicted RBP15.5■□□□□ 0.07
PRKCSH-206ENST00000587509 COL24A1Q17RW2 1714 aa15.5■□□□□ 0.07
PRKCSH-206ENST00000587509 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
PRKCSH-206ENST00000587509 TJP1Q07157 1748 aa15.49■□□□□ 0.07
PRKCSH-206ENST00000587509 STARD3NLO95772 234 aa15.49■□□□□ 0.07
PRKCSH-206ENST00000587509 LMOD3Q0VAK6 560 aa15.49■□□□□ 0.07
PRKCSH-206ENST00000587509 ZNF790Q6PG37 636 aa15.49■□□□□ 0.07
PRKCSH-206ENST00000587509 TEX13AQ9BXU3 409 aaPredicted RBP15.49■□□□□ 0.07
PRKCSH-206ENST00000587509 BTBD11A6QL63 1104 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 RFC4P35249 363 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 NPM2Q86SE8 214 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 FMNL2Q96PY5 1086 aa15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-206ENST00000587509 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
PRKCSH-206ENST00000587509 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
PRKCSH-206ENST00000587509 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
PRKCSH-206ENST00000587509 PNISRQ8TF01 805 aaKnown RBP15.47■□□□□ 0.07
PRKCSH-206ENST00000587509 SLC4A9Q96Q91 983 aa15.47■□□□□ 0.07
PRKCSH-206ENST00000587509 CCDC87Q9NVE4 849 aa15.47■□□□□ 0.07
PRKCSH-206ENST00000587509 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
PRKCSH-206ENST00000587509 MCM10Q7L590 875 aa15.45■□□□□ 0.06
PRKCSH-206ENST00000587509 DNAJC10Q8IXB1 793 aa15.45■□□□□ 0.06
PRKCSH-206ENST00000587509 NLGN1Q8N2Q7 840 aa15.45■□□□□ 0.06
PRKCSH-206ENST00000587509 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
PRKCSH-206ENST00000587509 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
PRKCSH-206ENST00000587509 C4AP0C0L4 1744 aa15.43■□□□□ 0.06
PRKCSH-206ENST00000587509 ANP32CO43423 234 aa15.43■□□□□ 0.06
PRKCSH-206ENST00000587509 ZPR1O75312 459 aa15.43■□□□□ 0.06
PRKCSH-206ENST00000587509 CYP19A1P11511 503 aaPredicted RBP15.43■□□□□ 0.06
PRKCSH-206ENST00000587509 ZNF496Q96IT1 587 aaPredicted RBP15.43■□□□□ 0.06
PRKCSH-206ENST00000587509 COL15A1P39059 1388 aa15.43■□□□□ 0.06
PRKCSH-206ENST00000587509 A0A087WZG4 1122 aa15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 TAF7Q15545 349 aaPredicted RBP15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 ARHGEF1Q92888 912 aaKnown RBP15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 USP42Q9H9J4 1324 aaKnown RBP15.42■□□□□ 0.06
PRKCSH-206ENST00000587509 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms