RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 NBPF14Q5TI25 921 aa5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 PHTF2Q8N3S3 785 aa5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 RNF166Q96A37 237 aaPredicted RBP5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 CHIC2Q9UKJ5 165 aa5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 LRRC9Q6ZRR7 1453 aa5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 C4orf48Q5BLP8 95 aa5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 NFATC2IPQ8NCF5 419 aa5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 ARMC2Q8NEN0 867 aa5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 ZMIZ1Q9ULJ6 1067 aa5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 FCF1Q9Y324 198 aaKnown RBP5.53□□□□□ -1.52
LDLRAD4-209ENST00000587440 MED14O60244 1454 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 PHLPP1O60346 1717 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L3A6NCW0 530 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L4A6NCW7 530 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 CSB-PGBD3P0DP91 1061 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L2Q6R6M4 530 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L1Q7RTZ2 530 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 ADAM32Q8TC27 787 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 C1QTNF2Q9BXJ5 285 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 CCDC9Q9Y3X0 531 aaKnown RBP5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 UGGT2Q9NYU1 1516 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 STRCP1A6NGW2 1772 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 BIVM-ERCC5R4GMW8 1640 aa5.52□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L5A8MUK1 530 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 PTK2Q05397 1052 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 PLA2G2CQ5R387 149 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 PLEKHM2Q8IWE5 1019 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 DEPDC4Q8N2C3 294 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 STK32AQ8WU08 396 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 FOXJ1Q92949 421 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 NGLY1Q96IV0 654 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 CEP126Q9P2H0 1117 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 KDM5DQ9BY66 1539 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 DEPDC5O75140 1603 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 DNMT1P26358 1616 aaKnown RBP5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 A2ML1A8K2U0 1454 aa5.51□□□□□ -1.53
LDLRAD4-209ENST00000587440 SHPRHQ149N8 1683 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 BLMP54132 1417 aaPredicted RBP5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 COL16A1Q07092 1604 aaPredicted RBP5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 BRD1O95696 1058 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 SKIP12755 728 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 ERFEQ4G0M1 354 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 CCDC24Q8N4L8 307 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 ZNF511Q8NB15 262 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 BAP1Q92560 729 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 ARHGAP9Q9BRR9 750 aa5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 GZF1Q9H116 711 aaPredicted RBP5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.5□□□□□ -1.53
LDLRAD4-209ENST00000587440 RNF223E7ERA6 249 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 PPEF1O14829 653 aaPredicted RBP5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 GIGYF1O75420 1035 aaPredicted RBP5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 PDE4CQ08493 712 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 ELOAQ14241 798 aaKnown RBP5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 LINC01559Q495D7 138 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 CRTC2Q53ET0 693 aaPredicted RBP5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 TMEM164Q5U3C3 297 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 TRAF7Q6Q0C0 670 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 EMID1Q96A84 441 aaPredicted RBP5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 VRTNQ9H8Y1 702 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 PCDHB9Q9Y5E1 797 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 ATP10BO94823 1461 aa5.49□□□□□ -1.53
LDLRAD4-209ENST00000587440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 KIF14Q15058 1648 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 IQGAP1P46940 1657 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 SH3BP2P78314 561 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 KCNA1Q09470 495 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 NCOA4Q13772 614 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 TSGA10IPQ3SY00 556 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 SLAIN2Q9P270 581 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 HCSTQ9UBK5 93 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 XIRP1Q702N8 1843 aaKnown RBP5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 NPHP4O75161 1426 aaPredicted RBP5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 AFF2P51816 1311 aa5.48□□□□□ -1.53
LDLRAD4-209ENST00000587440 ZMYM3Q14202 1370 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 NINLQ9Y2I6 1382 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L15C9J2P7 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L10C9JJH3 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L13C9JLJ4 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L12C9JPN9 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L11C9JVI0 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L21D6R901 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L18D6R9N7 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L22D6RA61 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L17D6RBQ6 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L19D6RCP7 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L20D6RJB6 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 MCCD1P59942 119 aaPredicted RBP5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 SKOR1P84550 965 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 KCNC4Q03721 635 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 USP17L24Q0WX57 530 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 RNF135Q8IUD6 432 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 TRMT44Q8IYL2 757 aaKnown RBP5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 ANKLE1Q8NAG6 615 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 PLPP7Q8NBV4 271 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 CCDC85AQ96PX6 553 aaPredicted RBP5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 CARD14Q9BXL6 1004 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 NOVA2Q9UNW9 492 aaKnown RBP5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 PCNTO95613 3336 aa5.47□□□□□ -1.53
LDLRAD4-209ENST00000587440 FAM196BA6NMK8 535 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms