RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, human

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-210	ENST00000587429	AK7	Q96M32	723 aa		29.27	■■■□□ 2.28
PKN1-210	ENST00000587429	UBR3	Q6ZT12	1888 aa		29.26	■■■□□ 2.27
PKN1-210	ENST00000587429	DCAF8L1	A6NGE4	600 aa		29.26	■■■□□ 2.27
PKN1-210	ENST00000587429	HMGB2	P26583	209 aa	Known RBP	29.26	■■■□□ 2.27
PKN1-210	ENST00000587429	ATP6V1A	P38606	617 aa		29.26	■■■□□ 2.27
PKN1-210	ENST00000587429	CABP4	P57796	275 aa		29.26	■■■□□ 2.27
PKN1-210	ENST00000587429	MSL1	Q68DK7	614 aa		29.26	■■■□□ 2.27
PKN1-210	ENST00000587429	KLHL34	Q8N239	644 aa		29.24	■■■□□ 2.27
PKN1-210	ENST00000587429	SLC4A9	Q96Q91	983 aa		29.24	■■■□□ 2.27
PKN1-210	ENST00000587429	PHF14	O94880	888 aa		29.23	■■■□□ 2.27
PKN1-210	ENST00000587429	FLAD1	Q8NFF5	587 aa		29.23	■■■□□ 2.27
PKN1-210	ENST00000587429	RBM42	Q9BTD8	480 aa	Known RBP	29.23	■■■□□ 2.27
PKN1-210	ENST00000587429	NFATC2IP	Q8NCF5	419 aa		29.22	■■■□□ 2.27
PKN1-210	ENST00000587429	MAP3K5	Q99683	1374 aa		29.21	■■■□□ 2.27
PKN1-210	ENST00000587429	COL3A1	P02461	1466 aa	Predicted RBP	29.21	■■■□□ 2.27
PKN1-210	ENST00000587429	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	29.2	■■■□□ 2.26
PKN1-210	ENST00000587429	SCN11A	Q9UI33	1791 aa		29.2	■■■□□ 2.26
PKN1-210	ENST00000587429	AKAP4	Q5JQC9	854 aa		29.19	■■■□□ 2.26
PKN1-210	ENST00000587429	LGR6	Q9HBX8	967 aa		29.18	■■■□□ 2.26
PKN1-210	ENST00000587429	U2SURP	O15042	1029 aa	Known RBP	29.17	■■■□□ 2.26
PKN1-210	ENST00000587429	GNPAT	O15228	680 aa		29.17	■■■□□ 2.26
PKN1-210	ENST00000587429	MTHFSD	Q2M296	383 aa	Known RBP	29.17	■■■□□ 2.26
PKN1-210	ENST00000587429	VIRMA	Q69YN4	1812 aa	Known RBP	29.15	■■■□□ 2.26
PKN1-210	ENST00000587429	PTCD1	O75127	700 aa	Known RBP	29.15	■■■□□ 2.26
PKN1-210	ENST00000587429	YY1	P25490	414 aa		29.15	■■■□□ 2.26
PKN1-210	ENST00000587429	SSFA2	P28290	1259 aa		29.15	■■■□□ 2.26
PKN1-210	ENST00000587429	NLGN2	Q8NFZ4	835 aa		29.14	■■■□□ 2.26
PKN1-210	ENST00000587429	ZNF831	Q5JPB2	1677 aa		29.12	■■■□□ 2.25
PKN1-210	ENST00000587429	MYH14	Q7Z406	1995 aa	Known RBP	29.12	■■■□□ 2.25
PKN1-210	ENST00000587429	RNMT	O43148	476 aa	Known RBP	29.12	■■■□□ 2.25
PKN1-210	ENST00000587429	UTRN	P46939	3433 aa		29.12	■■■□□ 2.25
PKN1-210	ENST00000587429	SLC52A2	Q9HAB3	445 aa		29.11	■■■□□ 2.25
PKN1-210	ENST00000587429	COL5A3	P25940	1745 aa	Predicted RBP	29.11	■■■□□ 2.25
PKN1-210	ENST00000587429	PPP2R1A	P30153	589 aa		29.1	■■■□□ 2.25
PKN1-210	ENST00000587429	RC3H1	Q5TC82	1133 aa	Known RBP	29.08	■■■□□ 2.25
PKN1-210	ENST00000587429	CFAP53	Q96M91	514 aa		29.07	■■■□□ 2.24
PKN1-210	ENST00000587429	RTCB	Q9Y3I0	505 aa	Known RBP	29.07	■■■□□ 2.24
PKN1-210	ENST00000587429	SLC39A6	Q13433	755 aa		29.06	■■■□□ 2.24
PKN1-210	ENST00000587429	GPR162	Q16538	588 aa		29.06	■■■□□ 2.24
PKN1-210	ENST00000587429	CNTNAP4	Q9C0A0	1308 aa		29.05	■■■□□ 2.24
PKN1-210	ENST00000587429	TRAPPC3L	Q5T215	181 aa		29.05	■■■□□ 2.24
PKN1-210	ENST00000587429	PELP1	Q8IZL8	1130 aa	Known RBP	29.05	■■■□□ 2.24
PKN1-210	ENST00000587429	ARHGEF1	Q92888	912 aa	Known RBP	29.04	■■■□□ 2.24
PKN1-210	ENST00000587429	ADAMTS7	Q9UKP4	1686 aa		29.04	■■■□□ 2.24
PKN1-210	ENST00000587429	MRC1	P22897	1456 aa		29.04	■■■□□ 2.24
PKN1-210	ENST00000587429	CHD4	Q14839	1912 aa		29.03	■■■□□ 2.24
PKN1-210	ENST00000587429	RPS6KA4	O75676	772 aa		29.03	■■■□□ 2.24
PKN1-210	ENST00000587429	PHACTR3	Q96KR7	559 aa		29.03	■■■□□ 2.24
PKN1-210	ENST00000587429	TJP1	Q07157	1748 aa		29.03	■■■□□ 2.24
PKN1-210	ENST00000587429	CRKL	P46109	303 aa	Known RBP	29.02	■■■□□ 2.24
PKN1-210	ENST00000587429	GOLGB1	Q14789	3259 aa	Known RBP	29.02	■■■□□ 2.24
PKN1-210	ENST00000587429	CD2AP	Q9Y5K6	639 aa		29.01	■■■□□ 2.23
PKN1-210	ENST00000587429	PRKAR2B	P31323	418 aa		29	■■■□□ 2.23
PKN1-210	ENST00000587429	DNAJC10	Q8IXB1	793 aa		29	■■■□□ 2.23
PKN1-210	ENST00000587429	IL17RE	Q8NFR9	667 aa		29	■■■□□ 2.23
PKN1-210	ENST00000587429	RSPH6A	Q9H0K4	717 aa		29	■■■□□ 2.23
PKN1-210	ENST00000587429	GAS2L2	Q8NHY3	880 aa		28.99	■■■□□ 2.23
PKN1-210	ENST00000587429	NUDC	Q9Y266	331 aa		28.99	■■■□□ 2.23
PKN1-210	ENST00000587429	GNAT3	A8MTJ3	354 aa		28.98	■■■□□ 2.23
PKN1-210	ENST00000587429	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.98	■■■□□ 2.23
PKN1-210	ENST00000587429	ADRA2B	P18089	450 aa		28.98	■■■□□ 2.23
PKN1-210	ENST00000587429	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.98	■■■□□ 2.23
PKN1-210	ENST00000587429	MMP10	P09238	476 aa		28.97	■■■□□ 2.23
PKN1-210	ENST00000587429	YBX3	P16989	372 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
PKN1-210	ENST00000587429	RFC4	P35249	363 aa		28.97	■■■□□ 2.23
PKN1-210	ENST00000587429	INTS5	Q6P9B9	1019 aa	Known RBP	28.97	■■■□□ 2.23
PKN1-210	ENST00000587429	KCP	Q6ZWJ8	1503 aa		28.95	■■■□□ 2.23
PKN1-210	ENST00000587429	CIC	Q96RK0	1608 aa	Predicted RBP	28.95	■■■□□ 2.23
PKN1-210	ENST00000587429	C4A	P0C0L4	1744 aa		28.94	■■■□□ 2.22
PKN1-210	ENST00000587429	GYS1	P13807	737 aa		28.94	■■■□□ 2.22
PKN1-210	ENST00000587429	NLGN1	Q8N2Q7	840 aa		28.93	■■■□□ 2.22
PKN1-210	ENST00000587429	SRP68	Q9UHB9	627 aa	Known RBP	28.93	■■■□□ 2.22
PKN1-210	ENST00000587429	CYP19A1	P11511	503 aa	Predicted RBP	28.92	■■■□□ 2.22
PKN1-210	ENST00000587429	TEF	Q10587	303 aa		28.92	■■■□□ 2.22
PKN1-210	ENST00000587429	CCDC87	Q9NVE4	849 aa		28.91	■■■□□ 2.22
PKN1-210	ENST00000587429	UBR2	Q8IWV8	1755 aa		28.9	■■■□□ 2.22
PKN1-210	ENST00000587429	WWC3	Q9ULE0	1092 aa		28.9	■■■□□ 2.22
PKN1-210	ENST00000587429	SIPA1L3	O60292	1781 aa	Predicted RBP	28.9	■■■□□ 2.22
PKN1-210	ENST00000587429	FCHSD2	O94868	740 aa		28.89	■■■□□ 2.22
PKN1-210	ENST00000587429	TTC5	Q8N0Z6	440 aa		28.87	■■■□□ 2.21
PKN1-210	ENST00000587429	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.87	■■■□□ 2.21
PKN1-210	ENST00000587429	ZNF496	Q96IT1	587 aa	Predicted RBP	28.87	■■■□□ 2.21
PKN1-210	ENST00000587429	USP42	Q9H9J4	1324 aa	Known RBP	28.87	■■■□□ 2.21
PKN1-210	ENST00000587429	CEMIP	Q8WUJ3	1361 aa		28.87	■■■□□ 2.21
PKN1-210	ENST00000587429	FKBP8	Q14318	412 aa		28.86	■■■□□ 2.21
PKN1-210	ENST00000587429	ZNF790	Q6PG37	636 aa		28.86	■■■□□ 2.21
PKN1-210	ENST00000587429	VSIG10	Q8N0Z9	540 aa		28.86	■■■□□ 2.21
PKN1-210	ENST00000587429	SOS1	Q07889	1333 aa	Predicted RBP	28.86	■■■□□ 2.21
PKN1-210	ENST00000587429	GRIN3B	O60391	1043 aa		28.85	■■■□□ 2.21
PKN1-210	ENST00000587429	DDX10	Q13206	875 aa	Known RBP	28.85	■■■□□ 2.21
PKN1-210	ENST00000587429	ZBTB1	Q9Y2K1	713 aa		28.85	■■■□□ 2.21
PKN1-210	ENST00000587429	KCNQ3	O43525	872 aa		28.84	■■■□□ 2.21
PKN1-210	ENST00000587429	KIF13B	Q9NQT8	1826 aa		28.83	■■■□□ 2.21
PKN1-210	ENST00000587429	MCM10	Q7L590	875 aa		28.83	■■■□□ 2.21
PKN1-210	ENST00000587429	PARP3	Q9Y6F1	533 aa		28.83	■■■□□ 2.21
PKN1-210	ENST00000587429	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.81	■■■□□ 2.2
PKN1-210	ENST00000587429	DCTN1	Q14203	1278 aa		28.81	■■■□□ 2.2
PKN1-210	ENST00000587429	USPL1	Q5W0Q7	1092 aa		28.81	■■■□□ 2.2
PKN1-210	ENST00000587429	HEG1	Q9ULI3	1381 aa		28.8	■■■□□ 2.2
PKN1-210	ENST00000587429	ZPR1	O75312	459 aa		28.8	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms