RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MRC1P22897 1456 aa19.79■□□□□ 0.76
ATG4D-207ENST00000587256 C4BP0C0L5 1744 aa19.78■□□□□ 0.76
ATG4D-207ENST00000587256 MYBBP1AQ9BQG0 1328 aaKnown RBP19.77■□□□□ 0.76
ATG4D-207ENST00000587256 RNMTO43148 476 aaKnown RBP19.77■□□□□ 0.76
ATG4D-207ENST00000587256 NFATC2IPQ8NCF5 419 aa19.77■□□□□ 0.76
ATG4D-207ENST00000587256 ADAMTS7Q9UKP4 1686 aa19.77■□□□□ 0.76
ATG4D-207ENST00000587256 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
ATG4D-207ENST00000587256 VIRMAQ69YN4 1812 aaKnown RBP19.76■□□□□ 0.75
ATG4D-207ENST00000587256 ATP6V1AP38606 617 aa19.76■□□□□ 0.75
ATG4D-207ENST00000587256 AK7Q96M32 723 aa19.76■□□□□ 0.75
ATG4D-207ENST00000587256 RBM42Q9BTD8 480 aaKnown RBP19.76■□□□□ 0.75
ATG4D-207ENST00000587256 SLC52A2Q9HAB3 445 aa19.76■□□□□ 0.75
ATG4D-207ENST00000587256 LGR6Q9HBX8 967 aa19.76■□□□□ 0.75
ATG4D-207ENST00000587256 PPP1R1BQ9UD71 204 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-207ENST00000587256 FCHSD2O94868 740 aa19.75■□□□□ 0.75
ATG4D-207ENST00000587256 PHACTR3Q96KR7 559 aa19.75■□□□□ 0.75
ATG4D-207ENST00000587256 MTFR1LQ9H019 292 aa19.75■□□□□ 0.75
ATG4D-207ENST00000587256 GNAT3A8MTJ3 354 aa19.74■□□□□ 0.75
ATG4D-207ENST00000587256 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-207ENST00000587256 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
ATG4D-207ENST00000587256 MSH5O43196 834 aa19.73■□□□□ 0.75
ATG4D-207ENST00000587256 NEFMP07197 916 aa19.73■□□□□ 0.75
ATG4D-207ENST00000587256 ITPK1Q13572 414 aa19.73■□□□□ 0.75
ATG4D-207ENST00000587256 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
ATG4D-207ENST00000587256 ZNF831Q5JPB2 1677 aa19.72■□□□□ 0.75
ATG4D-207ENST00000587256 PTCD1O75127 700 aaKnown RBP19.72■□□□□ 0.75
ATG4D-207ENST00000587256 TEFQ10587 303 aa19.71■□□□□ 0.75
ATG4D-207ENST00000587256 SLC16A10Q8TF71 515 aa19.7■□□□□ 0.74
ATG4D-207ENST00000587256 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-207ENST00000587256 COL5A3P25940 1745 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-207ENST00000587256 PHF14O94880 888 aa19.69■□□□□ 0.74
ATG4D-207ENST00000587256 FLAD1Q8NFF5 587 aa19.69■□□□□ 0.74
ATG4D-207ENST00000587256 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
ATG4D-207ENST00000587256 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
ATG4D-207ENST00000587256 GNPATO15228 680 aa19.68■□□□□ 0.74
ATG4D-207ENST00000587256 PTGER2P43116 358 aa19.68■□□□□ 0.74
ATG4D-207ENST00000587256 COL23A1Q86Y22 540 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-207ENST00000587256 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
ATG4D-207ENST00000587256 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
ATG4D-207ENST00000587256 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-207ENST00000587256 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
ATG4D-207ENST00000587256 IL17REQ8NFR9 667 aa19.67■□□□□ 0.74
ATG4D-207ENST00000587256 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
ATG4D-207ENST00000587256 TJP1Q07157 1748 aa19.67■□□□□ 0.74
ATG4D-207ENST00000587256 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
ATG4D-207ENST00000587256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.66■□□□□ 0.74
ATG4D-207ENST00000587256 SSFA2P28290 1259 aa19.66■□□□□ 0.74
ATG4D-207ENST00000587256 POLD1P28340 1107 aa19.66■□□□□ 0.74
ATG4D-207ENST00000587256 TTC5Q8N0Z6 440 aa19.66■□□□□ 0.74
ATG4D-207ENST00000587256 CEMIPQ8WUJ3 1361 aa19.66■□□□□ 0.74
ATG4D-207ENST00000587256 SIPA1L3O60292 1781 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-207ENST00000587256 CNTNAP4Q9C0A0 1308 aa19.65■□□□□ 0.74
ATG4D-207ENST00000587256 WDR43Q15061 677 aaKnown RBP eCLIP19.64■□□□□ 0.73
ATG4D-207ENST00000587256 MCM10Q7L590 875 aa19.64■□□□□ 0.73
ATG4D-207ENST00000587256 AMIGO3Q86WK7 504 aa19.64■□□□□ 0.73
ATG4D-207ENST00000587256 SGIP1Q9BQI5 828 aa19.64■□□□□ 0.73
ATG4D-207ENST00000587256 UBR2Q8IWV8 1755 aa19.64■□□□□ 0.73
ATG4D-207ENST00000587256 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
ATG4D-207ENST00000587256 SMIM5Q71RC9 77 aa19.63■□□□□ 0.73
ATG4D-207ENST00000587256 PLEKHF1Q96S99 279 aa19.63■□□□□ 0.73
ATG4D-207ENST00000587256 RTCBQ9Y3I0 505 aaKnown RBP19.63■□□□□ 0.73
ATG4D-207ENST00000587256 ARXQ96QS3 562 aa19.62■□□□□ 0.73
ATG4D-207ENST00000587256 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
ATG4D-207ENST00000587256 HTATSF1O43719 755 aaKnown RBP19.61■□□□□ 0.73
ATG4D-207ENST00000587256 CRKLP46109 303 aaKnown RBP19.61■□□□□ 0.73
ATG4D-207ENST00000587256 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
ATG4D-207ENST00000587256 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
ATG4D-207ENST00000587256 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
ATG4D-207ENST00000587256 DNAJC10Q8IXB1 793 aa19.61■□□□□ 0.73
ATG4D-207ENST00000587256 BTBD11A6QL63 1104 aa19.6■□□□□ 0.73
ATG4D-207ENST00000587256 ZNF790Q6PG37 636 aa19.6■□□□□ 0.73
ATG4D-207ENST00000587256 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
ATG4D-207ENST00000587256 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
ATG4D-207ENST00000587256 FHDC1Q9C0D6 1143 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-207ENST00000587256 RPS6KA4O75676 772 aa19.58■□□□□ 0.72
ATG4D-207ENST00000587256 ADRA2BP18089 450 aa19.58■□□□□ 0.72
ATG4D-207ENST00000587256 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.72
ATG4D-207ENST00000587256 VSIG10Q8N0Z9 540 aa19.58■□□□□ 0.72
ATG4D-207ENST00000587256 MYH14Q7Z406 1995 aaKnown RBP19.57■□□□□ 0.72
ATG4D-207ENST00000587256 CCDC146Q8IYE0 955 aa19.57■□□□□ 0.72
ATG4D-207ENST00000587256 ZNF496Q96IT1 587 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-207ENST00000587256 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
ATG4D-207ENST00000587256 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
ATG4D-207ENST00000587256 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
ATG4D-207ENST00000587256 C4AP0C0L4 1744 aa19.56■□□□□ 0.72
ATG4D-207ENST00000587256 ANP32CO43423 234 aa19.55■□□□□ 0.72
ATG4D-207ENST00000587256 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
ATG4D-207ENST00000587256 RFC4P35249 363 aa19.55■□□□□ 0.72
ATG4D-207ENST00000587256 INTS5Q6P9B9 1019 aaKnown RBP19.54■□□□□ 0.72
ATG4D-207ENST00000587256 ARHGEF1Q92888 912 aaKnown RBP19.54■□□□□ 0.72
ATG4D-207ENST00000587256 KCNQ3O43525 872 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 STARD3NLO95772 234 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 RIPK4P57078 832 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 RUNDC1Q96C34 613 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 THUMPD2Q9BTF0 503 aaKnown RBP19.53■□□□□ 0.72
ATG4D-207ENST00000587256 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 ZBTB1Q9Y2K1 713 aa19.53■□□□□ 0.72
ATG4D-207ENST00000587256 TAF7Q15545 349 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms