RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 ZNF530Q6P9A1 599 aaPredicted RBP26■■□□□ 1.75
SPHK1-204ENST00000587167 IFNL2Q8IZJ0 200 aa26■■□□□ 1.75
SPHK1-204ENST00000587167 SCN11AQ9UI33 1791 aa26■■□□□ 1.75
SPHK1-204ENST00000587167 PHKG2P15735 406 aa25.98■■□□□ 1.75
SPHK1-204ENST00000587167 MTHFSDQ2M296 383 aaKnown RBP25.98■■□□□ 1.75
SPHK1-204ENST00000587167 CHD4Q14839 1912 aa25.97■■□□□ 1.75
SPHK1-204ENST00000587167 NKX1-1Q15270 411 aaPredicted RBP25.97■■□□□ 1.75
SPHK1-204ENST00000587167 PHACTR3Q96KR7 559 aa25.97■■□□□ 1.75
SPHK1-204ENST00000587167 PNNQ9H307 717 aaKnown RBP25.97■■□□□ 1.75
SPHK1-204ENST00000587167 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
SPHK1-204ENST00000587167 C1orf141Q5JVX7 400 aa25.96■■□□□ 1.75
SPHK1-204ENST00000587167 PLEKHF1Q96S99 279 aa25.95■■□□□ 1.74
SPHK1-204ENST00000587167 PALLDQ8WX93 1383 aa25.95■■□□□ 1.74
SPHK1-204ENST00000587167 NEFMP07197 916 aa25.94■■□□□ 1.74
SPHK1-204ENST00000587167 POLD1P28340 1107 aa25.94■■□□□ 1.74
SPHK1-204ENST00000587167 MPRIPQ6WCQ1 1025 aa25.94■■□□□ 1.74
SPHK1-204ENST00000587167 COL23A1Q86Y22 540 aaPredicted RBP25.94■■□□□ 1.74
SPHK1-204ENST00000587167 AKAP4Q5JQC9 854 aa25.93■■□□□ 1.74
SPHK1-204ENST00000587167 GAS2L2Q8NHY3 880 aa25.93■■□□□ 1.74
SPHK1-204ENST00000587167 PNISRQ8TF01 805 aaKnown RBP25.93■■□□□ 1.74
SPHK1-204ENST00000587167 MIER1Q8N108 512 aa25.92■■□□□ 1.74
SPHK1-204ENST00000587167 MAPK8IP3Q9UPT6 1336 aa25.91■■□□□ 1.74
SPHK1-204ENST00000587167 HSP90AB1P08238 724 aaKnown RBP25.91■■□□□ 1.74
SPHK1-204ENST00000587167 CCDC146Q8IYE0 955 aa25.91■■□□□ 1.74
SPHK1-204ENST00000587167 ADAMTS7Q9UKP4 1686 aa25.9■■□□□ 1.74
SPHK1-204ENST00000587167 PIGBQ92521 554 aa25.9■■□□□ 1.74
SPHK1-204ENST00000587167 C4BP0C0L5 1744 aa25.9■■□□□ 1.74
SPHK1-204ENST00000587167 CCER2I3L3R5 266 aa25.89■■□□□ 1.74
SPHK1-204ENST00000587167 HMGB2P26583 209 aaKnown RBP25.89■■□□□ 1.74
SPHK1-204ENST00000587167 SMARCC1Q92922 1105 aaPredicted RBP25.89■■□□□ 1.74
SPHK1-204ENST00000587167 KDM6AO15550 1401 aaPredicted RBP25.88■■□□□ 1.73
SPHK1-204ENST00000587167 DCAF5Q96JK2 942 aa25.88■■□□□ 1.73
SPHK1-204ENST00000587167 RUNDC1Q96C34 613 aa25.87■■□□□ 1.73
SPHK1-204ENST00000587167 UBR3Q6ZT12 1888 aa25.87■■□□□ 1.73
SPHK1-204ENST00000587167 GNAT3A8MTJ3 354 aa25.86■■□□□ 1.73
SPHK1-204ENST00000587167 SIPA1L3O60292 1781 aaPredicted RBP25.84■■□□□ 1.73
SPHK1-204ENST00000587167 MSH5O43196 834 aa25.84■■□□□ 1.73
SPHK1-204ENST00000587167 NFE2L2Q16236 605 aa25.84■■□□□ 1.73
SPHK1-204ENST00000587167 FAM9BQ8IZU0 186 aa25.84■■□□□ 1.73
SPHK1-204ENST00000587167 FLAD1Q8NFF5 587 aa25.84■■□□□ 1.73
SPHK1-204ENST00000587167 RNMTO43148 476 aaKnown RBP25.83■■□□□ 1.73
SPHK1-204ENST00000587167 KLHL34Q8N239 644 aa25.83■■□□□ 1.73
SPHK1-204ENST00000587167 ZNF784Q8NCA9 323 aaPredicted RBP25.83■■□□□ 1.73
SPHK1-204ENST00000587167 NLGN2Q8NFZ4 835 aa25.83■■□□□ 1.73
SPHK1-204ENST00000587167 LGR6Q9HBX8 967 aa25.83■■□□□ 1.73
SPHK1-204ENST00000587167 ERVV-2B6SEH9 535 aa25.82■■□□□ 1.72
SPHK1-204ENST00000587167 AMIGO3Q86WK7 504 aa25.82■■□□□ 1.72
SPHK1-204ENST00000587167 GPR162Q16538 588 aa25.81■■□□□ 1.72
SPHK1-204ENST00000587167 UTRNP46939 3433 aa25.81■■□□□ 1.72
SPHK1-204ENST00000587167 LOC102724428A0A0B4J2F2 783 aa25.8■■□□□ 1.72
SPHK1-204ENST00000587167 SIK1P57059 783 aa25.8■■□□□ 1.72
SPHK1-204ENST00000587167 MSL1Q68DK7 614 aa25.8■■□□□ 1.72
SPHK1-204ENST00000587167 TMOD3Q9NYL9 352 aa25.8■■□□□ 1.72
SPHK1-204ENST00000587167 TMPOP42166 694 aaKnown RBP25.79■■□□□ 1.72
SPHK1-204ENST00000587167 CABP4P57796 275 aa25.79■■□□□ 1.72
SPHK1-204ENST00000587167 RTF1Q92541 710 aaKnown RBP25.79■■□□□ 1.72
SPHK1-204ENST00000587167 ASAP1Q9ULH1 1129 aa25.79■■□□□ 1.72
SPHK1-204ENST00000587167 MRC1P22897 1456 aa25.79■■□□□ 1.72
SPHK1-204ENST00000587167 RIPK4P57078 832 aa25.78■■□□□ 1.72
SPHK1-204ENST00000587167 IL17REQ8NFR9 667 aa25.78■■□□□ 1.72
SPHK1-204ENST00000587167 AK7Q96M32 723 aa25.78■■□□□ 1.72
SPHK1-204ENST00000587167 RRP7AQ9Y3A4 280 aaKnown RBP25.78■■□□□ 1.72
SPHK1-204ENST00000587167 HTATSF1O43719 755 aaKnown RBP25.77■■□□□ 1.72
SPHK1-204ENST00000587167 NEUROD2Q15784 382 aa25.77■■□□□ 1.72
SPHK1-204ENST00000587167 LINC00116Q8NCU8 138 aa25.77■■□□□ 1.72
SPHK1-204ENST00000587167 APAF1O14727 1248 aa25.76■■□□□ 1.71
SPHK1-204ENST00000587167 MCM10Q7L590 875 aa25.76■■□□□ 1.71
SPHK1-204ENST00000587167 NFATC2IPQ8NCF5 419 aa25.76■■□□□ 1.71
SPHK1-204ENST00000587167 ATG3Q9NT62 314 aa25.76■■□□□ 1.71
SPHK1-204ENST00000587167 ZNF831Q5JPB2 1677 aa25.76■■□□□ 1.71
SPHK1-204ENST00000587167 ITPK1Q13572 414 aa25.75■■□□□ 1.71
SPHK1-204ENST00000587167 DCTN1Q14203 1278 aa25.75■■□□□ 1.71
SPHK1-204ENST00000587167 SLC52A2Q9HAB3 445 aa25.75■■□□□ 1.71
SPHK1-204ENST00000587167 CEMIPQ8WUJ3 1361 aa25.74■■□□□ 1.71
SPHK1-204ENST00000587167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.74■■□□□ 1.71
SPHK1-204ENST00000587167 SMIM5Q71RC9 77 aa25.74■■□□□ 1.71
SPHK1-204ENST00000587167 SSFA2P28290 1259 aa25.73■■□□□ 1.71
SPHK1-204ENST00000587167 TEFQ10587 303 aa25.73■■□□□ 1.71
SPHK1-204ENST00000587167 CD2APQ9Y5K6 639 aa25.73■■□□□ 1.71
SPHK1-204ENST00000587167 YBX3P16989 372 aaKnown RBP eCLIP25.72■■□□□ 1.71
SPHK1-204ENST00000587167 PHF14O94880 888 aa25.71■■□□□ 1.71
SPHK1-204ENST00000587167 ATP6V1AP38606 617 aa25.71■■□□□ 1.71
SPHK1-204ENST00000587167 LMOD3Q0VAK6 560 aa25.71■■□□□ 1.71
SPHK1-204ENST00000587167 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
SPHK1-204ENST00000587167 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
SPHK1-204ENST00000587167 UBR2Q8IWV8 1755 aa25.69■■□□□ 1.7
SPHK1-204ENST00000587167 SLC4A9Q96Q91 983 aa25.69■■□□□ 1.7
SPHK1-204ENST00000587167 THUMPD2Q9BTF0 503 aaKnown RBP25.69■■□□□ 1.7
SPHK1-204ENST00000587167 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
SPHK1-204ENST00000587167 TRIM35Q9UPQ4 493 aa25.68■■□□□ 1.7
SPHK1-204ENST00000587167 KDM3BQ7LBC6 1761 aa25.67■■□□□ 1.7
SPHK1-204ENST00000587167 GRIN3BO60391 1043 aa25.67■■□□□ 1.7
SPHK1-204ENST00000587167 GNPATO15228 680 aa25.66■■□□□ 1.7
SPHK1-204ENST00000587167 SLC39A6Q13433 755 aa25.64■■□□□ 1.7
SPHK1-204ENST00000587167 BTBD11A6QL63 1104 aa25.63■■□□□ 1.69
SPHK1-204ENST00000587167 TAF7Q15545 349 aaPredicted RBP25.63■■□□□ 1.69
SPHK1-204ENST00000587167 MYH14Q7Z406 1995 aaKnown RBP25.62■■□□□ 1.69
SPHK1-204ENST00000587167 GOLGB1Q14789 3259 aaKnown RBP25.62■■□□□ 1.69
SPHK1-204ENST00000587167 TJP1Q07157 1748 aa25.61■■□□□ 1.69
SPHK1-204ENST00000587167 RC3H1Q5TC82 1133 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms