RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 C5P01031 1676 aa25.73■■□□□ 1.71
CLPTM1-206ENST00000586975 NPC1L1Q9UHC9 1359 aa25.72■■□□□ 1.71
CLPTM1-206ENST00000586975 QSER1Q2KHR3 1735 aa25.72■■□□□ 1.71
CLPTM1-206ENST00000586975 FLAD1Q8NFF5 587 aa25.72■■□□□ 1.71
CLPTM1-206ENST00000586975 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
CLPTM1-206ENST00000586975 ITPK1Q13572 414 aa25.71■■□□□ 1.71
CLPTM1-206ENST00000586975 U2SURPO15042 1029 aaKnown RBP25.7■■□□□ 1.7
CLPTM1-206ENST00000586975 AMIGO3Q86WK7 504 aa25.69■■□□□ 1.7
CLPTM1-206ENST00000586975 C4BP0C0L5 1744 aa25.68■■□□□ 1.7
CLPTM1-206ENST00000586975 NFATC2IPQ8NCF5 419 aa25.68■■□□□ 1.7
CLPTM1-206ENST00000586975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.67■■□□□ 1.7
CLPTM1-206ENST00000586975 GNPATO15228 680 aa25.67■■□□□ 1.7
CLPTM1-206ENST00000586975 YY1P25490 414 aa25.66■■□□□ 1.7
CLPTM1-206ENST00000586975 AKAP4Q5JQC9 854 aa25.66■■□□□ 1.7
CLPTM1-206ENST00000586975 TAF1LQ8IZX4 1826 aa25.65■■□□□ 1.7
CLPTM1-206ENST00000586975 PTCD1O75127 700 aaKnown RBP25.65■■□□□ 1.7
CLPTM1-206ENST00000586975 SLC4A9Q96Q91 983 aa25.64■■□□□ 1.7
CLPTM1-206ENST00000586975 SSFA2P28290 1259 aa25.63■■□□□ 1.69
CLPTM1-206ENST00000586975 MTHFSDQ2M296 383 aaKnown RBP25.63■■□□□ 1.69
CLPTM1-206ENST00000586975 LGR6Q9HBX8 967 aa25.63■■□□□ 1.69
CLPTM1-206ENST00000586975 MAP3K5Q99683 1374 aa25.62■■□□□ 1.69
CLPTM1-206ENST00000586975 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
CLPTM1-206ENST00000586975 CFAP53Q96M91 514 aa25.62■■□□□ 1.69
CLPTM1-206ENST00000586975 GPR162Q16538 588 aa25.6■■□□□ 1.69
CLPTM1-206ENST00000586975 NLGN2Q8NFZ4 835 aa25.6■■□□□ 1.69
CLPTM1-206ENST00000586975 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
CLPTM1-206ENST00000586975 RNMTO43148 476 aaKnown RBP25.59■■□□□ 1.69
CLPTM1-206ENST00000586975 RTCBQ9Y3I0 505 aaKnown RBP25.59■■□□□ 1.69
CLPTM1-206ENST00000586975 SLC52A2Q9HAB3 445 aa25.58■■□□□ 1.69
CLPTM1-206ENST00000586975 PPP2R1AP30153 589 aa25.57■■□□□ 1.68
CLPTM1-206ENST00000586975 TRAPPC3LQ5T215 181 aa25.57■■□□□ 1.68
CLPTM1-206ENST00000586975 COL24A1Q17RW2 1714 aa25.56■■□□□ 1.68
CLPTM1-206ENST00000586975 UBR3Q6ZT12 1888 aa25.55■■□□□ 1.68
CLPTM1-206ENST00000586975 SLC39A6Q13433 755 aa25.54■■□□□ 1.68
CLPTM1-206ENST00000586975 RC3H1Q5TC82 1133 aaKnown RBP25.54■■□□□ 1.68
CLPTM1-206ENST00000586975 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
CLPTM1-206ENST00000586975 GAS2L2Q8NHY3 880 aa25.52■■□□□ 1.68
CLPTM1-206ENST00000586975 CNTNAP4Q9C0A0 1308 aa25.52■■□□□ 1.68
CLPTM1-206ENST00000586975 RPS6KA4O75676 772 aa25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 U2AF1L5P0DN76 240 aaPredicted RBP25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 U2AF1Q01081 240 aaKnown RBP eCLIP25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 ARHGEF1Q92888 912 aaKnown RBP25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 UTRNP46939 3433 aa25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
CLPTM1-206ENST00000586975 RFC4P35249 363 aa25.5■■□□□ 1.67
CLPTM1-206ENST00000586975 CRKLP46109 303 aaKnown RBP25.5■■□□□ 1.67
CLPTM1-206ENST00000586975 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
CLPTM1-206ENST00000586975 GNAT3A8MTJ3 354 aa25.49■■□□□ 1.67
CLPTM1-206ENST00000586975 ADRA2BP18089 450 aa25.48■■□□□ 1.67
CLPTM1-206ENST00000586975 DNAJC10Q8IXB1 793 aa25.48■■□□□ 1.67
CLPTM1-206ENST00000586975 PHACTR3Q96KR7 559 aa25.48■■□□□ 1.67
CLPTM1-206ENST00000586975 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
CLPTM1-206ENST00000586975 MMP10P09238 476 aa25.47■■□□□ 1.67
CLPTM1-206ENST00000586975 TEFQ10587 303 aa25.47■■□□□ 1.67
CLPTM1-206ENST00000586975 ZNF831Q5JPB2 1677 aa25.45■■□□□ 1.67
CLPTM1-206ENST00000586975 TTC5Q8N0Z6 440 aa25.45■■□□□ 1.66
CLPTM1-206ENST00000586975 NLGN1Q8N2Q7 840 aa25.45■■□□□ 1.66
CLPTM1-206ENST00000586975 IL17REQ8NFR9 667 aa25.45■■□□□ 1.66
CLPTM1-206ENST00000586975 MRC1P22897 1456 aa25.45■■□□□ 1.66
CLPTM1-206ENST00000586975 COL5A3P25940 1745 aaPredicted RBP25.44■■□□□ 1.66
CLPTM1-206ENST00000586975 WWC3Q9ULE0 1092 aa25.44■■□□□ 1.66
CLPTM1-206ENST00000586975 GOLGB1Q14789 3259 aaKnown RBP25.44■■□□□ 1.66
CLPTM1-206ENST00000586975 YBX3P16989 372 aaKnown RBP eCLIP25.43■■□□□ 1.66
CLPTM1-206ENST00000586975 GYS1P13807 737 aa25.42■■□□□ 1.66
CLPTM1-206ENST00000586975 INTS5Q6P9B9 1019 aaKnown RBP25.42■■□□□ 1.66
CLPTM1-206ENST00000586975 CCDC87Q9NVE4 849 aa25.42■■□□□ 1.66
CLPTM1-206ENST00000586975 SRP68Q9UHB9 627 aaKnown RBP25.42■■□□□ 1.66
CLPTM1-206ENST00000586975 FCHSD2O94868 740 aa25.4■■□□□ 1.66
CLPTM1-206ENST00000586975 CYP19A1P11511 503 aaPredicted RBP25.4■■□□□ 1.66
CLPTM1-206ENST00000586975 TJP1Q07157 1748 aa25.4■■□□□ 1.66
CLPTM1-206ENST00000586975 GRIN3BO60391 1043 aa25.39■■□□□ 1.66
CLPTM1-206ENST00000586975 PARP3Q9Y6F1 533 aa25.39■■□□□ 1.66
CLPTM1-206ENST00000586975 MYH14Q7Z406 1995 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-206ENST00000586975 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-206ENST00000586975 RTF1Q92541 710 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-206ENST00000586975 KCPQ6ZWJ8 1503 aa25.37■■□□□ 1.65
CLPTM1-206ENST00000586975 ADAMTS7Q9UKP4 1686 aa25.37■■□□□ 1.65
CLPTM1-206ENST00000586975 ZNF790Q6PG37 636 aa25.37■■□□□ 1.65
CLPTM1-206ENST00000586975 ZPR1O75312 459 aa25.36■■□□□ 1.65
CLPTM1-206ENST00000586975 VSIG10Q8N0Z9 540 aa25.36■■□□□ 1.65
CLPTM1-206ENST00000586975 ZNF496Q96IT1 587 aaPredicted RBP25.36■■□□□ 1.65
CLPTM1-206ENST00000586975 ZBTB1Q9Y2K1 713 aa25.36■■□□□ 1.65
CLPTM1-206ENST00000586975 USP42Q9H9J4 1324 aaKnown RBP25.36■■□□□ 1.65
CLPTM1-206ENST00000586975 VIRMAQ69YN4 1812 aaKnown RBP25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 BTBD11A6QL63 1104 aa25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 FKBP8Q14318 412 aa25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 MCM10Q7L590 875 aa25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 ZNF784Q8NCA9 323 aaPredicted RBP25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 SOS1Q07889 1333 aaPredicted RBP25.35■■□□□ 1.65
CLPTM1-206ENST00000586975 STARD3NLO95772 234 aa25.34■■□□□ 1.65
CLPTM1-206ENST00000586975 NEFMP07197 916 aa25.34■■□□□ 1.65
CLPTM1-206ENST00000586975 CICQ96RK0 1608 aaPredicted RBP25.34■■□□□ 1.65
CLPTM1-206ENST00000586975 DCTN1Q14203 1278 aa25.33■■□□□ 1.65
CLPTM1-206ENST00000586975 USPL1Q5W0Q7 1092 aa25.33■■□□□ 1.65
CLPTM1-206ENST00000586975 CEMIPQ8WUJ3 1361 aa25.32■■□□□ 1.64
CLPTM1-206ENST00000586975 KCNQ3O43525 872 aa25.32■■□□□ 1.64
CLPTM1-206ENST00000586975 FMNL2Q96PY5 1086 aa25.32■■□□□ 1.64
CLPTM1-206ENST00000586975 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms