RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
CALR-203ENST00000586803 SIK1P57059 783 aa17.86■□□□□ 0.45
CALR-203ENST00000586803 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
CALR-203ENST00000586803 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
CALR-203ENST00000586803 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
CALR-203ENST00000586803 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
CALR-203ENST00000586803 DLG5Q8TDM6 1919 aa17.84■□□□□ 0.45
CALR-203ENST00000586803 KCPQ6ZWJ8 1503 aa17.84■□□□□ 0.45
CALR-203ENST00000586803 CABP4P57796 275 aa17.84■□□□□ 0.45
CALR-203ENST00000586803 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
CALR-203ENST00000586803 AK7Q96M32 723 aa17.84■□□□□ 0.45
CALR-203ENST00000586803 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
CALR-203ENST00000586803 PTGER2P43116 358 aa17.83■□□□□ 0.44
CALR-203ENST00000586803 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
CALR-203ENST00000586803 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
CALR-203ENST00000586803 SGIP1Q9BQI5 828 aa17.82■□□□□ 0.44
CALR-203ENST00000586803 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CALR-203ENST00000586803 MYH14Q7Z406 1995 aaKnown RBP17.81■□□□□ 0.44
CALR-203ENST00000586803 FLAD1Q8NFF5 587 aa17.81■□□□□ 0.44
CALR-203ENST00000586803 RSPH6AQ9H0K4 717 aa17.81■□□□□ 0.44
CALR-203ENST00000586803 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
CALR-203ENST00000586803 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
CALR-203ENST00000586803 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
CALR-203ENST00000586803 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
CALR-203ENST00000586803 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
CALR-203ENST00000586803 ITPK1Q13572 414 aa17.79■□□□□ 0.44
CALR-203ENST00000586803 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
CALR-203ENST00000586803 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
CALR-203ENST00000586803 SSFA2P28290 1259 aa17.78■□□□□ 0.44
CALR-203ENST00000586803 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
CALR-203ENST00000586803 RALBP1Q15311 655 aa17.78■□□□□ 0.44
CALR-203ENST00000586803 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
CALR-203ENST00000586803 LAMB4A4D0S4 1761 aa17.77■□□□□ 0.44
CALR-203ENST00000586803 MSH5O43196 834 aa17.77■□□□□ 0.44
CALR-203ENST00000586803 POLD1P28340 1107 aa17.77■□□□□ 0.44
CALR-203ENST00000586803 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.44
CALR-203ENST00000586803 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
CALR-203ENST00000586803 NFATC2IPQ8NCF5 419 aa17.77■□□□□ 0.44
CALR-203ENST00000586803 CEMIPQ8WUJ3 1361 aa17.77■□□□□ 0.43
CALR-203ENST00000586803 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
CALR-203ENST00000586803 GNPATO15228 680 aa17.76■□□□□ 0.43
CALR-203ENST00000586803 ARXQ96QS3 562 aa17.76■□□□□ 0.43
CALR-203ENST00000586803 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
CALR-203ENST00000586803 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
CALR-203ENST00000586803 PHF14O94880 888 aa17.75■□□□□ 0.43
CALR-203ENST00000586803 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
CALR-203ENST00000586803 LGR6Q9HBX8 967 aa17.75■□□□□ 0.43
CALR-203ENST00000586803 SCN7AQ01118 1682 aa17.74■□□□□ 0.43
CALR-203ENST00000586803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.74■□□□□ 0.43
CALR-203ENST00000586803 FCHSD2O94868 740 aa17.74■□□□□ 0.43
CALR-203ENST00000586803 KIF13BQ9NQT8 1826 aa17.74■□□□□ 0.43
CALR-203ENST00000586803 PTCD1O75127 700 aaKnown RBP17.73■□□□□ 0.43
CALR-203ENST00000586803 AMIGO3Q86WK7 504 aa17.73■□□□□ 0.43
CALR-203ENST00000586803 FHDC1Q9C0D6 1143 aaPredicted RBP17.73■□□□□ 0.43
CALR-203ENST00000586803 TEFQ10587 303 aa17.72■□□□□ 0.43
CALR-203ENST00000586803 NEFMP07197 916 aa17.71■□□□□ 0.43
CALR-203ENST00000586803 ADRA2BP18089 450 aa17.71■□□□□ 0.43
CALR-203ENST00000586803 RC3H1Q5TC82 1133 aaKnown RBP17.71■□□□□ 0.43
CALR-203ENST00000586803 MSL1Q68DK7 614 aa17.71■□□□□ 0.43
CALR-203ENST00000586803 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
CALR-203ENST00000586803 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
CALR-203ENST00000586803 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
CALR-203ENST00000586803 BCORQ6W2J9 1755 aa17.7■□□□□ 0.42
CALR-203ENST00000586803 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
CALR-203ENST00000586803 KIAA1551Q9HCM1 1747 aa17.69■□□□□ 0.42
CALR-203ENST00000586803 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
CALR-203ENST00000586803 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
CALR-203ENST00000586803 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
CALR-203ENST00000586803 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
CALR-203ENST00000586803 CHD4Q14839 1912 aa17.68■□□□□ 0.42
CALR-203ENST00000586803 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
CALR-203ENST00000586803 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
CALR-203ENST00000586803 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
CALR-203ENST00000586803 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
CALR-203ENST00000586803 RPS6KA4O75676 772 aa17.66■□□□□ 0.42
CALR-203ENST00000586803 SMIM5Q71RC9 77 aa17.66■□□□□ 0.42
CALR-203ENST00000586803 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
CALR-203ENST00000586803 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
CALR-203ENST00000586803 COL15A1P39059 1388 aa17.66■□□□□ 0.42
CALR-203ENST00000586803 HTATSF1O43719 755 aaKnown RBP17.65■□□□□ 0.42
CALR-203ENST00000586803 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
CALR-203ENST00000586803 DNAJC10Q8IXB1 793 aa17.65■□□□□ 0.42
CALR-203ENST00000586803 CCDC87Q9NVE4 849 aa17.65■□□□□ 0.42
CALR-203ENST00000586803 TRAPPC3LQ5T215 181 aa17.64■□□□□ 0.41
CALR-203ENST00000586803 PLEKHF1Q96S99 279 aa17.64■□□□□ 0.41
CALR-203ENST00000586803 PRKRIP1Q9H875 184 aaPredicted RBP17.64■□□□□ 0.41
CALR-203ENST00000586803 UTRNP46939 3433 aa17.64■□□□□ 0.41
CALR-203ENST00000586803 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.41
CALR-203ENST00000586803 MCM10Q7L590 875 aa17.63■□□□□ 0.41
CALR-203ENST00000586803 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
CALR-203ENST00000586803 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
CALR-203ENST00000586803 NRXN2Q9P2S2 1712 aa17.63■□□□□ 0.41
CALR-203ENST00000586803 BRCA1P38398 1863 aaKnown RBP17.63■□□□□ 0.41
CALR-203ENST00000586803 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
CALR-203ENST00000586803 RFC4P35249 363 aa17.62■□□□□ 0.41
CALR-203ENST00000586803 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
CALR-203ENST00000586803 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
CALR-203ENST00000586803 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
CALR-203ENST00000586803 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
CALR-203ENST00000586803 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms