RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
LAMA3-205ENST00000586709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
LAMA3-205ENST00000586709 C5P01031 1676 aa13.56□□□□□ -0.24
LAMA3-205ENST00000586709 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
LAMA3-205ENST00000586709 SCN11AQ9UI33 1791 aa13.53□□□□□ -0.24
LAMA3-205ENST00000586709 MTHFSP49914 203 aa13.53□□□□□ -0.24
LAMA3-205ENST00000586709 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-205ENST00000586709 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
LAMA3-205ENST00000586709 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
LAMA3-205ENST00000586709 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
LAMA3-205ENST00000586709 IL13P35225 146 aa13.52□□□□□ -0.25
LAMA3-205ENST00000586709 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
LAMA3-205ENST00000586709 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
LAMA3-205ENST00000586709 KDRP35968 1356 aa13.52□□□□□ -0.25
LAMA3-205ENST00000586709 PHKG2P15735 406 aa13.51□□□□□ -0.25
LAMA3-205ENST00000586709 CNGB1Q14028 1251 aaPredicted RBP13.51□□□□□ -0.25
LAMA3-205ENST00000586709 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
LAMA3-205ENST00000586709 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
LAMA3-205ENST00000586709 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
LAMA3-205ENST00000586709 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
LAMA3-205ENST00000586709 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
LAMA3-205ENST00000586709 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
LAMA3-205ENST00000586709 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
LAMA3-205ENST00000586709 ZNF827Q17R98 1081 aa13.49□□□□□ -0.25
LAMA3-205ENST00000586709 AMOTQ4VCS5 1084 aa13.49□□□□□ -0.25
LAMA3-205ENST00000586709 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
LAMA3-205ENST00000586709 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
LAMA3-205ENST00000586709 UBR3Q6ZT12 1888 aa13.48□□□□□ -0.25
LAMA3-205ENST00000586709 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
LAMA3-205ENST00000586709 C4BP0C0L5 1744 aa13.48□□□□□ -0.25
LAMA3-205ENST00000586709 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
LAMA3-205ENST00000586709 KCNQ4P56696 695 aa13.48□□□□□ -0.25
LAMA3-205ENST00000586709 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
LAMA3-205ENST00000586709 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
LAMA3-205ENST00000586709 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
LAMA3-205ENST00000586709 PIGBQ92521 554 aa13.47□□□□□ -0.25
LAMA3-205ENST00000586709 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
LAMA3-205ENST00000586709 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
LAMA3-205ENST00000586709 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
LAMA3-205ENST00000586709 ZBTB7AO95365 584 aa13.46□□□□□ -0.25
LAMA3-205ENST00000586709 COL5A3P25940 1745 aaPredicted RBP13.45□□□□□ -0.26
LAMA3-205ENST00000586709 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
LAMA3-205ENST00000586709 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
LAMA3-205ENST00000586709 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
LAMA3-205ENST00000586709 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
LAMA3-205ENST00000586709 GOLGB1Q14789 3259 aaKnown RBP13.45□□□□□ -0.26
LAMA3-205ENST00000586709 ERVV-2B6SEH9 535 aa13.44□□□□□ -0.26
LAMA3-205ENST00000586709 HMOX1P09601 288 aa13.44□□□□□ -0.26
LAMA3-205ENST00000586709 HMGB2P26583 209 aaKnown RBP13.44□□□□□ -0.26
LAMA3-205ENST00000586709 MTFR1LQ9H019 292 aa13.44□□□□□ -0.26
LAMA3-205ENST00000586709 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
LAMA3-205ENST00000586709 UTRNP46939 3433 aa13.44□□□□□ -0.26
LAMA3-205ENST00000586709 PNPLA7Q6ZV29 1317 aa13.43□□□□□ -0.26
LAMA3-205ENST00000586709 OTUD5Q96G74 571 aa13.43□□□□□ -0.26
LAMA3-205ENST00000586709 ASAP1Q9ULH1 1129 aa13.43□□□□□ -0.26
LAMA3-205ENST00000586709 PTGER2P43116 358 aa13.42□□□□□ -0.26
LAMA3-205ENST00000586709 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
LAMA3-205ENST00000586709 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
LAMA3-205ENST00000586709 SIPA1L3O60292 1781 aaPredicted RBP13.41□□□□□ -0.26
LAMA3-205ENST00000586709 LOC102724428A0A0B4J2F2 783 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
LAMA3-205ENST00000586709 PPP2R1AP30153 589 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 SIK1P57059 783 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
LAMA3-205ENST00000586709 MRC1P22897 1456 aa13.41□□□□□ -0.26
LAMA3-205ENST00000586709 TJP1Q07157 1748 aa13.4□□□□□ -0.26
LAMA3-205ENST00000586709 CABP4P57796 275 aa13.4□□□□□ -0.26
LAMA3-205ENST00000586709 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
LAMA3-205ENST00000586709 UBR2Q8IWV8 1755 aa13.39□□□□□ -0.27
LAMA3-205ENST00000586709 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
LAMA3-205ENST00000586709 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
LAMA3-205ENST00000586709 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
LAMA3-205ENST00000586709 AK7Q96M32 723 aa13.38□□□□□ -0.27
LAMA3-205ENST00000586709 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 POTEMA6NI47 508 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 ITPK1Q13572 414 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
LAMA3-205ENST00000586709 NFATC2IPQ8NCF5 419 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 NUDCQ9Y266 331 aa13.37□□□□□ -0.27
LAMA3-205ENST00000586709 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
LAMA3-205ENST00000586709 ARXQ96QS3 562 aa13.36□□□□□ -0.27
LAMA3-205ENST00000586709 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
LAMA3-205ENST00000586709 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
LAMA3-205ENST00000586709 POLD1P28340 1107 aa13.35□□□□□ -0.27
LAMA3-205ENST00000586709 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
LAMA3-205ENST00000586709 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
LAMA3-205ENST00000586709 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
LAMA3-205ENST00000586709 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
LAMA3-205ENST00000586709 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
LAMA3-205ENST00000586709 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
LAMA3-205ENST00000586709 SSFA2P28290 1259 aa13.34□□□□□ -0.27
LAMA3-205ENST00000586709 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
LAMA3-205ENST00000586709 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
LAMA3-205ENST00000586709 DDX10Q13206 875 aaKnown RBP13.34□□□□□ -0.27
LAMA3-205ENST00000586709 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms