RNA–Protein interactions for RNA: ENST00000586708.1

SPC24-204, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-204ENST00000586708 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
SPC24-204ENST00000586708 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
SPC24-204ENST00000586708 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
SPC24-204ENST00000586708 CABP4P57796 275 aa18.28■□□□□ 0.52
SPC24-204ENST00000586708 NFATC2IPQ8NCF5 419 aa18.27■□□□□ 0.52
SPC24-204ENST00000586708 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
SPC24-204ENST00000586708 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
SPC24-204ENST00000586708 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.51
SPC24-204ENST00000586708 CICQ96RK0 1608 aaPredicted RBP18.27■□□□□ 0.51
SPC24-204ENST00000586708 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
SPC24-204ENST00000586708 SIK1P57059 783 aa18.26■□□□□ 0.51
SPC24-204ENST00000586708 PDGFDQ9GZP0 370 aaPredicted RBP18.26■□□□□ 0.51
SPC24-204ENST00000586708 CEMIPQ8WUJ3 1361 aa18.26■□□□□ 0.51
SPC24-204ENST00000586708 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
SPC24-204ENST00000586708 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
SPC24-204ENST00000586708 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
SPC24-204ENST00000586708 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
SPC24-204ENST00000586708 C4BP0C0L5 1744 aa18.25■□□□□ 0.51
SPC24-204ENST00000586708 ITPK1Q13572 414 aa18.23■□□□□ 0.51
SPC24-204ENST00000586708 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
SPC24-204ENST00000586708 UBR2Q8IWV8 1755 aa18.22■□□□□ 0.51
SPC24-204ENST00000586708 DLG5Q8TDM6 1919 aa18.22■□□□□ 0.51
SPC24-204ENST00000586708 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
SPC24-204ENST00000586708 PNPLA7Q6ZV29 1317 aa18.22■□□□□ 0.51
SPC24-204ENST00000586708 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
SPC24-204ENST00000586708 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
SPC24-204ENST00000586708 KCPQ6ZWJ8 1503 aa18.21■□□□□ 0.51
SPC24-204ENST00000586708 TJP1Q07157 1748 aa18.2■□□□□ 0.5
SPC24-204ENST00000586708 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
SPC24-204ENST00000586708 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
SPC24-204ENST00000586708 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
SPC24-204ENST00000586708 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
SPC24-204ENST00000586708 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
SPC24-204ENST00000586708 AMIGO3Q86WK7 504 aa18.18■□□□□ 0.5
SPC24-204ENST00000586708 SPON1Q9HCB6 807 aa18.18■□□□□ 0.5
SPC24-204ENST00000586708 NFE2L2Q16236 605 aa18.17■□□□□ 0.5
SPC24-204ENST00000586708 SLC16A10Q8TF71 515 aa18.17■□□□□ 0.5
SPC24-204ENST00000586708 SGIP1Q9BQI5 828 aa18.17■□□□□ 0.5
SPC24-204ENST00000586708 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
SPC24-204ENST00000586708 MTFR1LQ9H019 292 aa18.17■□□□□ 0.5
SPC24-204ENST00000586708 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
SPC24-204ENST00000586708 PTGER2P43116 358 aa18.16■□□□□ 0.5
SPC24-204ENST00000586708 TEFQ10587 303 aa18.16■□□□□ 0.5
SPC24-204ENST00000586708 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
SPC24-204ENST00000586708 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
SPC24-204ENST00000586708 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
SPC24-204ENST00000586708 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
SPC24-204ENST00000586708 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
SPC24-204ENST00000586708 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
SPC24-204ENST00000586708 NEFMP07197 916 aa18.14■□□□□ 0.49
SPC24-204ENST00000586708 MCM10Q7L590 875 aa18.14■□□□□ 0.49
SPC24-204ENST00000586708 VSIG10Q8N0Z9 540 aa18.14■□□□□ 0.49
SPC24-204ENST00000586708 FLAD1Q8NFF5 587 aa18.14■□□□□ 0.49
SPC24-204ENST00000586708 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
SPC24-204ENST00000586708 AK7Q96M32 723 aa18.14■□□□□ 0.49
SPC24-204ENST00000586708 SSFA2P28290 1259 aa18.13■□□□□ 0.49
SPC24-204ENST00000586708 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
SPC24-204ENST00000586708 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
SPC24-204ENST00000586708 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
SPC24-204ENST00000586708 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
SPC24-204ENST00000586708 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
SPC24-204ENST00000586708 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
SPC24-204ENST00000586708 ANP32CO43423 234 aa18.11■□□□□ 0.49
SPC24-204ENST00000586708 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
SPC24-204ENST00000586708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
SPC24-204ENST00000586708 GNPATO15228 680 aa18.1■□□□□ 0.49
SPC24-204ENST00000586708 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
SPC24-204ENST00000586708 CRKLP46109 303 aaKnown RBP18.1■□□□□ 0.49
SPC24-204ENST00000586708 DNAJC10Q8IXB1 793 aa18.1■□□□□ 0.49
SPC24-204ENST00000586708 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
SPC24-204ENST00000586708 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
SPC24-204ENST00000586708 KDM3BQ7LBC6 1761 aa18.09■□□□□ 0.49
SPC24-204ENST00000586708 BTBD11A6QL63 1104 aa18.09■□□□□ 0.49
SPC24-204ENST00000586708 KCNQ3O43525 872 aa18.09■□□□□ 0.49
SPC24-204ENST00000586708 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
SPC24-204ENST00000586708 CYP19A1P11511 503 aaPredicted RBP18.09■□□□□ 0.49
SPC24-204ENST00000586708 INTS5Q6P9B9 1019 aaKnown RBP18.09■□□□□ 0.49
SPC24-204ENST00000586708 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
SPC24-204ENST00000586708 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
SPC24-204ENST00000586708 ADRA2BP18089 450 aa18.08■□□□□ 0.48
SPC24-204ENST00000586708 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
SPC24-204ENST00000586708 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.48
SPC24-204ENST00000586708 C4AP0C0L4 1744 aa18.08■□□□□ 0.48
SPC24-204ENST00000586708 RIPK4P57078 832 aa18.07■□□□□ 0.48
SPC24-204ENST00000586708 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
SPC24-204ENST00000586708 RTCBQ9Y3I0 505 aaKnown RBP18.07■□□□□ 0.48
SPC24-204ENST00000586708 PHF14O94880 888 aa18.06■□□□□ 0.48
SPC24-204ENST00000586708 PNISRQ8TF01 805 aaKnown RBP18.06■□□□□ 0.48
SPC24-204ENST00000586708 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
SPC24-204ENST00000586708 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
SPC24-204ENST00000586708 SOS1Q07889 1333 aaPredicted RBP18.04■□□□□ 0.48
SPC24-204ENST00000586708 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
SPC24-204ENST00000586708 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
SPC24-204ENST00000586708 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
SPC24-204ENST00000586708 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
SPC24-204ENST00000586708 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
SPC24-204ENST00000586708 MSH5O43196 834 aa18.03■□□□□ 0.48
SPC24-204ENST00000586708 ARXQ96QS3 562 aa18.03■□□□□ 0.48
SPC24-204ENST00000586708 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
SPC24-204ENST00000586708 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms