RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
CNN1-205ENST00000586577 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
CNN1-205ENST00000586577 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CNN1-205ENST00000586577 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
CNN1-205ENST00000586577 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
CNN1-205ENST00000586577 PHF14O94880 888 aa17.49■□□□□ 0.39
CNN1-205ENST00000586577 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
CNN1-205ENST00000586577 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
CNN1-205ENST00000586577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
CNN1-205ENST00000586577 SSFA2P28290 1259 aa17.48■□□□□ 0.39
CNN1-205ENST00000586577 MTHFSP49914 203 aa17.48■□□□□ 0.39
CNN1-205ENST00000586577 PRELPP51888 382 aa17.48■□□□□ 0.39
CNN1-205ENST00000586577 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
CNN1-205ENST00000586577 JMYQ8N9B5 988 aa17.48■□□□□ 0.39
CNN1-205ENST00000586577 ITGB4P16144 1822 aa17.48■□□□□ 0.39
CNN1-205ENST00000586577 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
CNN1-205ENST00000586577 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
CNN1-205ENST00000586577 IL13P35225 146 aa17.47■□□□□ 0.39
CNN1-205ENST00000586577 MPRIPQ6WCQ1 1025 aa17.47■□□□□ 0.39
CNN1-205ENST00000586577 FSTL1Q12841 308 aa17.46■□□□□ 0.39
CNN1-205ENST00000586577 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.38
CNN1-205ENST00000586577 TGFB2P61812 414 aa17.45■□□□□ 0.38
CNN1-205ENST00000586577 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
CNN1-205ENST00000586577 BCS1LQ9Y276 419 aa17.45■□□□□ 0.38
CNN1-205ENST00000586577 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
CNN1-205ENST00000586577 KDRP35968 1356 aa17.43■□□□□ 0.38
CNN1-205ENST00000586577 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
CNN1-205ENST00000586577 MMP10P09238 476 aa17.41■□□□□ 0.38
CNN1-205ENST00000586577 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
CNN1-205ENST00000586577 KDM2BQ8NHM5 1336 aa17.41■□□□□ 0.38
CNN1-205ENST00000586577 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
CNN1-205ENST00000586577 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
CNN1-205ENST00000586577 PHKG2P15735 406 aa17.4■□□□□ 0.38
CNN1-205ENST00000586577 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
CNN1-205ENST00000586577 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
CNN1-205ENST00000586577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
CNN1-205ENST00000586577 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
CNN1-205ENST00000586577 PCNTO95613 3336 aa17.4■□□□□ 0.38
CNN1-205ENST00000586577 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
CNN1-205ENST00000586577 GNPATO15228 680 aa17.39■□□□□ 0.37
CNN1-205ENST00000586577 FCHSD2O94868 740 aa17.39■□□□□ 0.37
CNN1-205ENST00000586577 SIK1P57059 783 aa17.39■□□□□ 0.37
CNN1-205ENST00000586577 HTRA3P83110 453 aa17.39■□□□□ 0.37
CNN1-205ENST00000586577 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
CNN1-205ENST00000586577 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
CNN1-205ENST00000586577 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
CNN1-205ENST00000586577 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
CNN1-205ENST00000586577 A0A0G2JLW4 131 aa17.37■□□□□ 0.37
CNN1-205ENST00000586577 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
CNN1-205ENST00000586577 HMOX1P09601 288 aa17.37■□□□□ 0.37
CNN1-205ENST00000586577 C9orf131Q5VYM1 1079 aa17.37■□□□□ 0.37
CNN1-205ENST00000586577 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
CNN1-205ENST00000586577 PIGBQ92521 554 aa17.37■□□□□ 0.37
CNN1-205ENST00000586577 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
CNN1-205ENST00000586577 VIRMAQ69YN4 1812 aaKnown RBP17.36■□□□□ 0.37
CNN1-205ENST00000586577 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
CNN1-205ENST00000586577 LINC00116Q8NCU8 138 aa17.36■□□□□ 0.37
CNN1-205ENST00000586577 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
CNN1-205ENST00000586577 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
CNN1-205ENST00000586577 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
CNN1-205ENST00000586577 TRAPPC3LQ5T215 181 aa17.34■□□□□ 0.37
CNN1-205ENST00000586577 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
CNN1-205ENST00000586577 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
CNN1-205ENST00000586577 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
CNN1-205ENST00000586577 SCN11AQ9UI33 1791 aa17.34■□□□□ 0.37
CNN1-205ENST00000586577 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
CNN1-205ENST00000586577 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.37
CNN1-205ENST00000586577 DPEP1P16444 411 aa17.33■□□□□ 0.36
CNN1-205ENST00000586577 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
CNN1-205ENST00000586577 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
CNN1-205ENST00000586577 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
CNN1-205ENST00000586577 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
CNN1-205ENST00000586577 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
CNN1-205ENST00000586577 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
CNN1-205ENST00000586577 ADRA2BP18089 450 aa17.31■□□□□ 0.36
CNN1-205ENST00000586577 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
CNN1-205ENST00000586577 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
CNN1-205ENST00000586577 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
CNN1-205ENST00000586577 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
CNN1-205ENST00000586577 BRCA1P38398 1863 aaKnown RBP17.31■□□□□ 0.36
CNN1-205ENST00000586577 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
CNN1-205ENST00000586577 HSPA1AP0DMV8 641 aaKnown RBP17.3■□□□□ 0.36
CNN1-205ENST00000586577 HSPA1BP0DMV9 641 aaKnown RBP17.3■□□□□ 0.36
CNN1-205ENST00000586577 ASAP1Q9ULH1 1129 aa17.3■□□□□ 0.36
CNN1-205ENST00000586577 ITPK1Q13572 414 aa17.29■□□□□ 0.36
CNN1-205ENST00000586577 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
CNN1-205ENST00000586577 DALRD3Q5D0E6 543 aaKnown RBP17.29■□□□□ 0.36
CNN1-205ENST00000586577 C4AP0C0L4 1744 aa17.28■□□□□ 0.36
CNN1-205ENST00000586577 RFC4P35249 363 aa17.28■□□□□ 0.36
CNN1-205ENST00000586577 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
CNN1-205ENST00000586577 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
CNN1-205ENST00000586577 ATG3Q9NT62 314 aa17.27■□□□□ 0.36
CNN1-205ENST00000586577 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
CNN1-205ENST00000586577 MRC1P22897 1456 aa17.26■□□□□ 0.35
CNN1-205ENST00000586577 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
CNN1-205ENST00000586577 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
CNN1-205ENST00000586577 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
CNN1-205ENST00000586577 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
CNN1-205ENST00000586577 GYS1P13807 737 aa17.25■□□□□ 0.35
CNN1-205ENST00000586577 KCNA3P22001 575 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms