RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 HMOX1P09601 288 aa27.69■■■□□ 2.02
CIRBP-209ENST00000586555 PPP2R1AP30153 589 aa27.69■■■□□ 2.02
CIRBP-209ENST00000586555 SIK1P57059 783 aa27.69■■■□□ 2.02
CIRBP-209ENST00000586555 UBR3Q6ZT12 1888 aa27.69■■■□□ 2.02
CIRBP-209ENST00000586555 ERVV-2B6SEH9 535 aa27.68■■■□□ 2.02
CIRBP-209ENST00000586555 ASAP1Q9ULH1 1129 aa27.68■■■□□ 2.02
CIRBP-209ENST00000586555 NUDCQ9Y266 331 aa27.68■■■□□ 2.02
CIRBP-209ENST00000586555 AMIGO3Q86WK7 504 aa27.67■■■□□ 2.02
CIRBP-209ENST00000586555 KLHL34Q8N239 644 aa27.67■■■□□ 2.02
CIRBP-209ENST00000586555 NLGN2Q8NFZ4 835 aa27.66■■■□□ 2.02
CIRBP-209ENST00000586555 GPR162Q16538 588 aa27.65■■■□□ 2.02
CIRBP-209ENST00000586555 MSL1Q68DK7 614 aa27.65■■■□□ 2.02
CIRBP-209ENST00000586555 AK7Q96M32 723 aa27.65■■■□□ 2.02
CIRBP-209ENST00000586555 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
CIRBP-209ENST00000586555 COL3A1P02461 1466 aaPredicted RBP27.64■■■□□ 2.02
CIRBP-209ENST00000586555 GOLGB1Q14789 3259 aaKnown RBP27.64■■■□□ 2.02
CIRBP-209ENST00000586555 LINC00116Q8NCU8 138 aa27.64■■■□□ 2.02
CIRBP-209ENST00000586555 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
CIRBP-209ENST00000586555 ZNF784Q8NCA9 323 aaPredicted RBP27.63■■■□□ 2.01
CIRBP-209ENST00000586555 CABP4P57796 275 aa27.62■■■□□ 2.01
CIRBP-209ENST00000586555 ITPK1Q13572 414 aa27.62■■■□□ 2.01
CIRBP-209ENST00000586555 AKAP4Q5JQC9 854 aa27.62■■■□□ 2.01
CIRBP-209ENST00000586555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.61■■■□□ 2.01
CIRBP-209ENST00000586555 SSFA2P28290 1259 aa27.61■■■□□ 2.01
CIRBP-209ENST00000586555 ATP6V1AP38606 617 aa27.6■■■□□ 2.01
CIRBP-209ENST00000586555 SMIM5Q71RC9 77 aa27.6■■■□□ 2.01
CIRBP-209ENST00000586555 CD2APQ9Y5K6 639 aa27.58■■■□□ 2.01
CIRBP-209ENST00000586555 ZNF831Q5JPB2 1677 aa27.57■■■□□ 2
CIRBP-209ENST00000586555 PHF14O94880 888 aa27.57■■■□□ 2
CIRBP-209ENST00000586555 RALBP1Q15311 655 aa27.57■■■□□ 2
CIRBP-209ENST00000586555 SLC4A9Q96Q91 983 aa27.57■■■□□ 2
CIRBP-209ENST00000586555 KDM6AO15550 1401 aaPredicted RBP27.57■■■□□ 2
CIRBP-209ENST00000586555 MTHFSDQ2M296 383 aaKnown RBP27.56■■■□□ 2
CIRBP-209ENST00000586555 U2AF1L5P0DN76 240 aaPredicted RBP27.55■■■□□ 2
CIRBP-209ENST00000586555 U2AF1Q01081 240 aaKnown RBP eCLIP27.55■■■□□ 27e-7■■■■□ 23.3
CIRBP-209ENST00000586555 YBX3P16989 372 aaKnown RBP eCLIP27.54■■■□□ 2
CIRBP-209ENST00000586555 PELP1Q8IZL8 1130 aaKnown RBP27.54■■■□□ 2
CIRBP-209ENST00000586555 GAS2L2Q8NHY3 880 aa27.54■■■□□ 2
CIRBP-209ENST00000586555 GNPATO15228 680 aa27.53■■■□□ 2
CIRBP-209ENST00000586555 NFATC2IPQ8NCF5 419 aa27.53■■■□□ 2
CIRBP-209ENST00000586555 GRIN3BO60391 1043 aa27.51■■□□□ 1.99
CIRBP-209ENST00000586555 FCHSD2O94868 740 aa27.51■■□□□ 1.99
CIRBP-209ENST00000586555 RNMTO43148 476 aaKnown RBP27.5■■□□□ 1.99
CIRBP-209ENST00000586555 PRKAR2BP31323 418 aa27.5■■□□□ 1.99
CIRBP-209ENST00000586555 RC3H1Q5TC82 1133 aaKnown RBP27.5■■□□□ 1.99
CIRBP-209ENST00000586555 RBM42Q9BTD8 480 aaKnown RBP27.5■■□□□ 1.99
CIRBP-209ENST00000586555 SCN11AQ9UI33 1791 aa27.5■■□□□ 1.99
CIRBP-209ENST00000586555 RSPH6AQ9H0K4 717 aa27.49■■□□□ 1.99
CIRBP-209ENST00000586555 SLC52A2Q9HAB3 445 aa27.49■■□□□ 1.99
CIRBP-209ENST00000586555 MYH14Q7Z406 1995 aaKnown RBP27.49■■□□□ 1.99
CIRBP-209ENST00000586555 COL5A3P25940 1745 aaPredicted RBP27.49■■□□□ 1.99
CIRBP-209ENST00000586555 GNAT3A8MTJ3 354 aa27.48■■□□□ 1.99
CIRBP-209ENST00000586555 NEFMP07197 916 aa27.48■■□□□ 1.99
CIRBP-209ENST00000586555 LGR6Q9HBX8 967 aa27.48■■□□□ 1.99
CIRBP-209ENST00000586555 CNTNAP4Q9C0A0 1308 aa27.46■■□□□ 1.99
CIRBP-209ENST00000586555 RTCBQ9Y3I0 505 aaKnown RBP27.46■■□□□ 1.99
CIRBP-209ENST00000586555 TRAPPC3LQ5T215 181 aa27.45■■□□□ 1.98
CIRBP-209ENST00000586555 PNNQ9H307 717 aaKnown RBP27.44■■□□□ 1.98
CIRBP-209ENST00000586555 RPS6KA4O75676 772 aa27.43■■□□□ 1.98
CIRBP-209ENST00000586555 ADRA2BP18089 450 aa27.43■■□□□ 1.98
CIRBP-209ENST00000586555 ARHGEF1Q92888 912 aaKnown RBP27.43■■□□□ 1.98
CIRBP-209ENST00000586555 PTCD1O75127 700 aaKnown RBP27.42■■□□□ 1.98
CIRBP-209ENST00000586555 PHACTR3Q96KR7 559 aa27.42■■□□□ 1.98
CIRBP-209ENST00000586555 MYBBP1AQ9BQG0 1328 aaKnown RBP27.41■■□□□ 1.98
CIRBP-209ENST00000586555 TEFQ10587 303 aa27.41■■□□□ 1.98
CIRBP-209ENST00000586555 NLGN1Q8N2Q7 840 aa27.4■■□□□ 1.98
CIRBP-209ENST00000586555 MRC1P22897 1456 aa27.39■■□□□ 1.98
CIRBP-209ENST00000586555 CICQ96RK0 1608 aaPredicted RBP27.39■■□□□ 1.98
CIRBP-209ENST00000586555 MMP10P09238 476 aa27.39■■□□□ 1.98
CIRBP-209ENST00000586555 RTF1Q92541 710 aaKnown RBP27.39■■□□□ 1.98
CIRBP-209ENST00000586555 VIRMAQ69YN4 1812 aaKnown RBP27.39■■□□□ 1.97
CIRBP-209ENST00000586555 KIF13BQ9NQT8 1826 aa27.39■■□□□ 1.97
CIRBP-209ENST00000586555 ADAMTS7Q9UKP4 1686 aa27.38■■□□□ 1.97
CIRBP-209ENST00000586555 GYS1P13807 737 aa27.37■■□□□ 1.97
CIRBP-209ENST00000586555 TJP1Q07157 1748 aa27.36■■□□□ 1.97
CIRBP-209ENST00000586555 TTC5Q8N0Z6 440 aa27.36■■□□□ 1.97
CIRBP-209ENST00000586555 IL17REQ8NFR9 667 aa27.36■■□□□ 1.97
CIRBP-209ENST00000586555 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
CIRBP-209ENST00000586555 RFC4P35249 363 aa27.35■■□□□ 1.97
CIRBP-209ENST00000586555 CRKLP46109 303 aaKnown RBP27.35■■□□□ 1.97
CIRBP-209ENST00000586555 C4AP0C0L4 1744 aa27.34■■□□□ 1.97
CIRBP-209ENST00000586555 HTATSF1O43719 755 aaKnown RBP27.34■■□□□ 1.97
CIRBP-209ENST00000586555 C1QTNF8P60827 252 aa27.33■■□□□ 1.97
CIRBP-209ENST00000586555 SLC39A6Q13433 755 aa27.33■■□□□ 1.97
CIRBP-209ENST00000586555 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
CIRBP-209ENST00000586555 PRKRIP1Q9H875 184 aaPredicted RBP27.32■■□□□ 1.96
CIRBP-209ENST00000586555 MAPK8IP3Q9UPT6 1336 aa27.32■■□□□ 1.96
CIRBP-209ENST00000586555 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
CIRBP-209ENST00000586555 CEMIPQ8WUJ3 1361 aa27.31■■□□□ 1.96
CIRBP-209ENST00000586555 TGFB2P61812 414 aa27.3■■□□□ 1.96
CIRBP-209ENST00000586555 VSIG10Q8N0Z9 540 aa27.3■■□□□ 1.96
CIRBP-209ENST00000586555 C10orf71Q711Q0 1435 aa27.29■■□□□ 1.96
CIRBP-209ENST00000586555 PXDNLA1KZ92 1463 aa27.29■■□□□ 1.96
CIRBP-209ENST00000586555 DNAJC10Q8IXB1 793 aa27.28■■□□□ 1.96
CIRBP-209ENST00000586555 PLEKHF1Q96S99 279 aa27.28■■□□□ 1.96
CIRBP-209ENST00000586555 WWC3Q9ULE0 1092 aa27.28■■□□□ 1.96
CIRBP-209ENST00000586555 N4BP2Q86UW6 1770 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-209ENST00000586555 ADCY9O60503 1353 aa27.27■■□□□ 1.96
CIRBP-209ENST00000586555 BTBD11A6QL63 1104 aa27.27■■□□□ 1.96
CIRBP-209ENST00000586555 ZNF790Q6PG37 636 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms