RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 ATP6V1AP38606 617 aa25.6■■□□□ 1.69
TPM4-204ENST00000586499 SMIM5Q71RC9 77 aa25.6■■□□□ 1.69
TPM4-204ENST00000586499 DDX10Q13206 875 aaKnown RBP25.59■■□□□ 1.69
TPM4-204ENST00000586499 AMIGO3Q86WK7 504 aa25.59■■□□□ 1.69
TPM4-204ENST00000586499 SLC16A10Q8TF71 515 aa25.59■■□□□ 1.69
TPM4-204ENST00000586499 SLC4A9Q96Q91 983 aa25.59■■□□□ 1.69
TPM4-204ENST00000586499 C4BP0C0L5 1744 aa25.58■■□□□ 1.69
TPM4-204ENST00000586499 RBM42Q9BTD8 480 aaKnown RBP25.58■■□□□ 1.69
TPM4-204ENST00000586499 AK7Q96M32 723 aa25.57■■□□□ 1.68
TPM4-204ENST00000586499 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
TPM4-204ENST00000586499 RNMTO43148 476 aaKnown RBP25.56■■□□□ 1.68
TPM4-204ENST00000586499 HMGB2P26583 209 aaKnown RBP25.54■■□□□ 1.68
TPM4-204ENST00000586499 PHACTR3Q96KR7 559 aa25.54■■□□□ 1.68
TPM4-204ENST00000586499 ARXQ96QS3 562 aa25.54■■□□□ 1.68
TPM4-204ENST00000586499 RSPH6AQ9H0K4 717 aa25.54■■□□□ 1.68
TPM4-204ENST00000586499 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
TPM4-204ENST00000586499 PTCD1O75127 700 aaKnown RBP25.53■■□□□ 1.68
TPM4-204ENST00000586499 PHF14O94880 888 aa25.53■■□□□ 1.68
TPM4-204ENST00000586499 U2AF1L5P0DN76 240 aaPredicted RBP25.53■■□□□ 1.68
TPM4-204ENST00000586499 PRKAR2BP31323 418 aa25.53■■□□□ 1.68
TPM4-204ENST00000586499 U2AF1Q01081 240 aaKnown RBP eCLIP25.53■■□□□ 1.68
TPM4-204ENST00000586499 FHDC1Q9C0D6 1143 aaPredicted RBP25.53■■□□□ 1.68
TPM4-204ENST00000586499 SLC52A2Q9HAB3 445 aa25.53■■□□□ 1.68
TPM4-204ENST00000586499 MSL1Q68DK7 614 aa25.51■■□□□ 1.67
TPM4-204ENST00000586499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.5■■□□□ 1.67
TPM4-204ENST00000586499 UBR3Q6ZT12 1888 aa25.5■■□□□ 1.67
TPM4-204ENST00000586499 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
TPM4-204ENST00000586499 VIRMAQ69YN4 1812 aaKnown RBP25.49■■□□□ 1.67
TPM4-204ENST00000586499 GNPATO15228 680 aa25.49■■□□□ 1.67
TPM4-204ENST00000586499 POLD1P28340 1107 aa25.49■■□□□ 1.67
TPM4-204ENST00000586499 SLC39A6Q13433 755 aa25.49■■□□□ 1.67
TPM4-204ENST00000586499 GAS2L2Q8NHY3 880 aa25.49■■□□□ 1.67
TPM4-204ENST00000586499 SYT17Q9BSW7 474 aa25.49■■□□□ 1.67
TPM4-204ENST00000586499 COL24A1Q17RW2 1714 aa25.48■■□□□ 1.67
TPM4-204ENST00000586499 GNAT3A8MTJ3 354 aa25.47■■□□□ 1.67
TPM4-204ENST00000586499 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
TPM4-204ENST00000586499 ADAMTS7Q9UKP4 1686 aa25.47■■□□□ 1.67
TPM4-204ENST00000586499 MRC1P22897 1456 aa25.47■■□□□ 1.67
TPM4-204ENST00000586499 MAP3K5Q99683 1374 aa25.46■■□□□ 1.67
TPM4-204ENST00000586499 SSFA2P28290 1259 aa25.46■■□□□ 1.67
TPM4-204ENST00000586499 ZNF831Q5JPB2 1677 aa25.45■■□□□ 1.67
TPM4-204ENST00000586499 FCHSD2O94868 740 aa25.45■■□□□ 1.66
TPM4-204ENST00000586499 KLHL34Q8N239 644 aa25.45■■□□□ 1.66
TPM4-204ENST00000586499 COL5A3P25940 1745 aaPredicted RBP25.43■■□□□ 1.66
TPM4-204ENST00000586499 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
TPM4-204ENST00000586499 RALBP1Q15311 655 aa25.42■■□□□ 1.66
TPM4-204ENST00000586499 RC3H1Q5TC82 1133 aaKnown RBP25.42■■□□□ 1.66
TPM4-204ENST00000586499 RTCBQ9Y3I0 505 aaKnown RBP25.42■■□□□ 1.66
TPM4-204ENST00000586499 CNTNAP4Q9C0A0 1308 aa25.4■■□□□ 1.66
TPM4-204ENST00000586499 TEFQ10587 303 aa25.4■■□□□ 1.66
TPM4-204ENST00000586499 DNAJC10Q8IXB1 793 aa25.4■■□□□ 1.66
TPM4-204ENST00000586499 MYH14Q7Z406 1995 aaKnown RBP25.4■■□□□ 1.66
TPM4-204ENST00000586499 TJP1Q07157 1748 aa25.4■■□□□ 1.66
TPM4-204ENST00000586499 RPS6KA4O75676 772 aa25.39■■□□□ 1.66
TPM4-204ENST00000586499 CRKLP46109 303 aaKnown RBP25.39■■□□□ 1.66
TPM4-204ENST00000586499 TRAPPC3LQ5T215 181 aa25.39■■□□□ 1.66
TPM4-204ENST00000586499 KCPQ6ZWJ8 1503 aa25.38■■□□□ 1.65
TPM4-204ENST00000586499 ARHGEF1Q92888 912 aaKnown RBP25.38■■□□□ 1.65
TPM4-204ENST00000586499 CEMIPQ8WUJ3 1361 aa25.36■■□□□ 1.65
TPM4-204ENST00000586499 DCAF8L1A6NGE4 600 aa25.36■■□□□ 1.65
TPM4-204ENST00000586499 INTS5Q6P9B9 1019 aaKnown RBP25.36■■□□□ 1.65
TPM4-204ENST00000586499 MCM10Q7L590 875 aa25.36■■□□□ 1.65
TPM4-204ENST00000586499 DCTN1Q14203 1278 aa25.35■■□□□ 1.65
TPM4-204ENST00000586499 NLGN2Q8NFZ4 835 aa25.35■■□□□ 1.65
TPM4-204ENST00000586499 TTC5Q8N0Z6 440 aa25.34■■□□□ 1.65
TPM4-204ENST00000586499 CICQ96RK0 1608 aaPredicted RBP25.34■■□□□ 1.65
TPM4-204ENST00000586499 SIPA1L3O60292 1781 aaPredicted RBP25.33■■□□□ 1.65
TPM4-204ENST00000586499 CYP19A1P11511 503 aaPredicted RBP25.33■■□□□ 1.65
TPM4-204ENST00000586499 ZNF790Q6PG37 636 aa25.33■■□□□ 1.65
TPM4-204ENST00000586499 PLEKHF1Q96S99 279 aa25.33■■□□□ 1.65
TPM4-204ENST00000586499 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.64
TPM4-204ENST00000586499 KCNQ3O43525 872 aa25.32■■□□□ 1.64
TPM4-204ENST00000586499 ADRA2BP18089 450 aa25.32■■□□□ 1.64
TPM4-204ENST00000586499 RFC4P35249 363 aa25.32■■□□□ 1.64
TPM4-204ENST00000586499 RTF1Q92541 710 aaKnown RBP25.32■■□□□ 1.64
TPM4-204ENST00000586499 ZNF496Q96IT1 587 aaPredicted RBP25.32■■□□□ 1.64
TPM4-204ENST00000586499 UBR2Q8IWV8 1755 aa25.31■■□□□ 1.64
TPM4-204ENST00000586499 CCDC87Q9NVE4 849 aa25.31■■□□□ 1.64
TPM4-204ENST00000586499 BTBD11A6QL63 1104 aa25.3■■□□□ 1.64
TPM4-204ENST00000586499 VSIG10Q8N0Z9 540 aa25.3■■□□□ 1.64
TPM4-204ENST00000586499 NEFMP07197 916 aa25.29■■□□□ 1.64
TPM4-204ENST00000586499 GYS1P13807 737 aa25.29■■□□□ 1.64
TPM4-204ENST00000586499 SRP68Q9UHB9 627 aaKnown RBP25.29■■□□□ 1.64
TPM4-204ENST00000586499 UTRNP46939 3433 aa25.29■■□□□ 1.64
TPM4-204ENST00000586499 MMP10P09238 476 aa25.28■■□□□ 1.64
TPM4-204ENST00000586499 ZBTB1Q9Y2K1 713 aa25.28■■□□□ 1.64
TPM4-204ENST00000586499 C4AP0C0L4 1744 aa25.28■■□□□ 1.64
TPM4-204ENST00000586499 HTATSF1O43719 755 aaKnown RBP25.27■■□□□ 1.64
TPM4-204ENST00000586499 NLGN1Q8N2Q7 840 aa25.27■■□□□ 1.64
TPM4-204ENST00000586499 PRKRIP1Q9H875 184 aaPredicted RBP25.27■■□□□ 1.64
TPM4-204ENST00000586499 HEG1Q9ULI3 1381 aa25.27■■□□□ 1.64
TPM4-204ENST00000586499 CD2APQ9Y5K6 639 aa25.26■■□□□ 1.63
TPM4-204ENST00000586499 NFE2L2Q16236 605 aa25.25■■□□□ 1.63
TPM4-204ENST00000586499 GPR162Q16538 588 aa25.25■■□□□ 1.63
TPM4-204ENST00000586499 PELP1Q8IZL8 1130 aaKnown RBP25.25■■□□□ 1.63
TPM4-204ENST00000586499 FMNL2Q96PY5 1086 aa25.25■■□□□ 1.63
TPM4-204ENST00000586499 SOS1Q07889 1333 aaPredicted RBP25.25■■□□□ 1.63
TPM4-204ENST00000586499 DLG5Q8TDM6 1919 aa25.24■■□□□ 1.63
TPM4-204ENST00000586499 USP42Q9H9J4 1324 aaKnown RBP25.24■■□□□ 1.63
TPM4-204ENST00000586499 CANXP27824 592 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms