RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 ANKRD24Q8TF21 1146 aa12.68□□□□□ -0.38
TIMP2-204ENST00000586057 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
TIMP2-204ENST00000586057 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
TIMP2-204ENST00000586057 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
TIMP2-204ENST00000586057 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
TIMP2-204ENST00000586057 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
TIMP2-204ENST00000586057 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
TIMP2-204ENST00000586057 ARHGEF25Q86VW2 580 aa12.67□□□□□ -0.38
TIMP2-204ENST00000586057 ITPRIPQ8IWB1 547 aa12.67□□□□□ -0.38
TIMP2-204ENST00000586057 TAF3Q5VWG9 929 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
TIMP2-204ENST00000586057 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 TSPYL4Q9UJ04 414 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 MST1RQ04912 1400 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 NRKQ7Z2Y5 1582 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
TIMP2-204ENST00000586057 IL16Q14005 1332 aa12.65□□□□□ -0.38
TIMP2-204ENST00000586057 GAS2L2Q8NHY3 880 aa12.65□□□□□ -0.38
TIMP2-204ENST00000586057 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
TIMP2-204ENST00000586057 C22orf23Q9BZE7 217 aa12.65□□□□□ -0.38
TIMP2-204ENST00000586057 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
TIMP2-204ENST00000586057 CBX1P83916 185 aa12.64□□□□□ -0.39
TIMP2-204ENST00000586057 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
TIMP2-204ENST00000586057 GNAT3A8MTJ3 354 aa12.64□□□□□ -0.39
TIMP2-204ENST00000586057 VGLL3A8MV65 326 aa12.64□□□□□ -0.39
TIMP2-204ENST00000586057 VAMP4O75379 141 aa12.64□□□□□ -0.39
TIMP2-204ENST00000586057 TRIM27P14373 513 aa12.64□□□□□ -0.39
TIMP2-204ENST00000586057 ZNF530Q6P9A1 599 aaPredicted RBP12.64□□□□□ -0.39
TIMP2-204ENST00000586057 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
TIMP2-204ENST00000586057 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
TIMP2-204ENST00000586057 ARHGEF10O15013 1369 aa12.63□□□□□ -0.39
TIMP2-204ENST00000586057 MCM5P33992 734 aa12.63□□□□□ -0.39
TIMP2-204ENST00000586057 PDE3AQ14432 1141 aa12.63□□□□□ -0.39
TIMP2-204ENST00000586057 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
TIMP2-204ENST00000586057 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
TIMP2-204ENST00000586057 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
TIMP2-204ENST00000586057 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
TIMP2-204ENST00000586057 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
TIMP2-204ENST00000586057 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
TIMP2-204ENST00000586057 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.62□□□□□ -0.39
TIMP2-204ENST00000586057 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
TIMP2-204ENST00000586057 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 PIP4K2BP78356 416 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 NCBP3Q53F19 620 aaKnown RBP12.61□□□□□ -0.39
TIMP2-204ENST00000586057 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 DDIT3P35638 169 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 ZNF853P0CG23 659 aa12.61□□□□□ -0.39
TIMP2-204ENST00000586057 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
TIMP2-204ENST00000586057 IPO8O15397 1037 aaKnown RBP12.6□□□□□ -0.39
TIMP2-204ENST00000586057 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
TIMP2-204ENST00000586057 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 CHL1O00533 1208 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 TEFQ10587 303 aa12.6□□□□□ -0.39
TIMP2-204ENST00000586057 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
TIMP2-204ENST00000586057 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
TIMP2-204ENST00000586057 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
TIMP2-204ENST00000586057 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
TIMP2-204ENST00000586057 PDLIM2Q96JY6 352 aa12.59□□□□□ -0.39
TIMP2-204ENST00000586057 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
TIMP2-204ENST00000586057 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
TIMP2-204ENST00000586057 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
TIMP2-204ENST00000586057 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.39
TIMP2-204ENST00000586057 SMC5Q8IY18 1101 aa12.58□□□□□ -0.39
TIMP2-204ENST00000586057 MYRIPQ8NFW9 859 aa12.58□□□□□ -0.39
TIMP2-204ENST00000586057 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
TIMP2-204ENST00000586057 MVPQ14764 893 aaKnown RBP12.58□□□□□ -0.4
TIMP2-204ENST00000586057 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
TIMP2-204ENST00000586057 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
TIMP2-204ENST00000586057 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
TIMP2-204ENST00000586057 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
TIMP2-204ENST00000586057 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
TIMP2-204ENST00000586057 KDRP35968 1356 aa12.58□□□□□ -0.4
TIMP2-204ENST00000586057 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
TIMP2-204ENST00000586057 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
TIMP2-204ENST00000586057 EVA1CP58658 441 aa12.57□□□□□ -0.4
TIMP2-204ENST00000586057 MRPL50Q8N5N7 158 aaKnown RBP12.57□□□□□ -0.4
TIMP2-204ENST00000586057 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
TIMP2-204ENST00000586057 ERBB3P21860 1342 aa12.57□□□□□ -0.4
TIMP2-204ENST00000586057 CCDC39Q9UFE4 941 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 KCNQ3O43525 872 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 ZNF445P59923 1031 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
TIMP2-204ENST00000586057 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 ALDH1L2Q3SY69 923 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
TIMP2-204ENST00000586057 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
TIMP2-204ENST00000586057 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
TIMP2-204ENST00000586057 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
TIMP2-204ENST00000586057 SNX21Q969T3 373 aa12.55□□□□□ -0.4
TIMP2-204ENST00000586057 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms