RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 KDRP35968 1356 aa14.51□□□□□ -0.09
MBD3-203ENST00000585903 HSPA5P11021 654 aaKnown RBP14.51□□□□□ -0.09
MBD3-203ENST00000585903 PANK3Q9H999 370 aa14.51□□□□□ -0.09
MBD3-203ENST00000585903 CICQ96RK0 1608 aaPredicted RBP14.51□□□□□ -0.09
MBD3-203ENST00000585903 COL5A3P25940 1745 aaPredicted RBP14.5□□□□□ -0.09
MBD3-203ENST00000585903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.5□□□□□ -0.09
MBD3-203ENST00000585903 KIF13BQ9NQT8 1826 aa14.5□□□□□ -0.09
MBD3-203ENST00000585903 ADRA2BP18089 450 aa14.49□□□□□ -0.09
MBD3-203ENST00000585903 PLEKHO1Q53GL0 409 aaPredicted RBP14.49□□□□□ -0.09
MBD3-203ENST00000585903 RC3H1Q5TC82 1133 aaKnown RBP14.49□□□□□ -0.09
MBD3-203ENST00000585903 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
MBD3-203ENST00000585903 ASAP1Q9ULH1 1129 aa14.49□□□□□ -0.09
MBD3-203ENST00000585903 ATP6V1AP38606 617 aa14.48□□□□□ -0.09
MBD3-203ENST00000585903 GPBP1L1Q9HC44 474 aaPredicted RBP14.48□□□□□ -0.09
MBD3-203ENST00000585903 ATG3Q9NT62 314 aa14.48□□□□□ -0.09
MBD3-203ENST00000585903 MSL1Q68DK7 614 aa14.47□□□□□ -0.09
MBD3-203ENST00000585903 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
MBD3-203ENST00000585903 CNTNAP4Q9C0A0 1308 aa14.46□□□□□ -0.09
MBD3-203ENST00000585903 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.09
MBD3-203ENST00000585903 ITPK1Q13572 414 aa14.46□□□□□ -0.09
MBD3-203ENST00000585903 MORC1Q86VD1 984 aa14.46□□□□□ -0.09
MBD3-203ENST00000585903 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.09
MBD3-203ENST00000585903 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
MBD3-203ENST00000585903 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
MBD3-203ENST00000585903 GNPATO15228 680 aa14.45□□□□□ -0.1
MBD3-203ENST00000585903 KDM6AO15550 1401 aaPredicted RBP14.45□□□□□ -0.1
MBD3-203ENST00000585903 PHF14O94880 888 aa14.44□□□□□ -0.1
MBD3-203ENST00000585903 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
MBD3-203ENST00000585903 NLGN1Q8N2Q7 840 aa14.44□□□□□ -0.1
MBD3-203ENST00000585903 RTCBQ9Y3I0 505 aaKnown RBP14.44□□□□□ -0.1
MBD3-203ENST00000585903 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
MBD3-203ENST00000585903 TRAPPC3LQ5T215 181 aa14.43□□□□□ -0.1
MBD3-203ENST00000585903 ZNF530Q6P9A1 599 aaPredicted RBP14.43□□□□□ -0.1
MBD3-203ENST00000585903 MYH14Q7Z406 1995 aaKnown RBP14.42□□□□□ -0.1
MBD3-203ENST00000585903 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
MBD3-203ENST00000585903 IL13P35225 146 aa14.42□□□□□ -0.1
MBD3-203ENST00000585903 MTHFSP49914 203 aa14.42□□□□□ -0.1
MBD3-203ENST00000585903 CABP4P57796 275 aa14.42□□□□□ -0.1
MBD3-203ENST00000585903 TGFB2P61812 414 aa14.42□□□□□ -0.1
MBD3-203ENST00000585903 C4AP0C0L4 1744 aa14.41□□□□□ -0.1
MBD3-203ENST00000585903 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
MBD3-203ENST00000585903 ZNF526Q8TF50 670 aaPredicted RBP14.41□□□□□ -0.1
MBD3-203ENST00000585903 SLC4A9Q96Q91 983 aa14.41□□□□□ -0.1
MBD3-203ENST00000585903 NPC1L1Q9UHC9 1359 aa14.41□□□□□ -0.1
MBD3-203ENST00000585903 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
MBD3-203ENST00000585903 MRC1P22897 1456 aa14.4□□□□□ -0.1
MBD3-203ENST00000585903 KIF3CO14782 793 aa14.4□□□□□ -0.1
MBD3-203ENST00000585903 AKAP4Q5JQC9 854 aa14.4□□□□□ -0.1
MBD3-203ENST00000585903 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
MBD3-203ENST00000585903 C10orf71Q711Q0 1435 aa14.4□□□□□ -0.1
MBD3-203ENST00000585903 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
MBD3-203ENST00000585903 MMP10P09238 476 aa14.39□□□□□ -0.11
MBD3-203ENST00000585903 SULT6B1Q6IMI4 303 aa14.39□□□□□ -0.11
MBD3-203ENST00000585903 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
MBD3-203ENST00000585903 BRCA1P38398 1863 aaKnown RBP14.39□□□□□ -0.11
MBD3-203ENST00000585903 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
MBD3-203ENST00000585903 TJP1Q07157 1748 aa14.38□□□□□ -0.11
MBD3-203ENST00000585903 PER1O15534 1290 aaPredicted RBP14.38□□□□□ -0.11
MBD3-203ENST00000585903 RFC4P35249 363 aa14.38□□□□□ -0.11
MBD3-203ENST00000585903 APLP1P51693 650 aa14.38□□□□□ -0.11
MBD3-203ENST00000585903 AEBP1Q8IUX7 1158 aa14.38□□□□□ -0.11
MBD3-203ENST00000585903 ARHGEF1Q92888 912 aaKnown RBP14.38□□□□□ -0.11
MBD3-203ENST00000585903 KIF7Q2M1P5 1343 aa14.38□□□□□ -0.11
MBD3-203ENST00000585903 GYS1P13807 737 aa14.37□□□□□ -0.11
MBD3-203ENST00000585903 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
MBD3-203ENST00000585903 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
MBD3-203ENST00000585903 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
MBD3-203ENST00000585903 WDR90Q96KV7 1748 aa14.36□□□□□ -0.11
MBD3-203ENST00000585903 N4BP2Q86UW6 1770 aaPredicted RBP14.35□□□□□ -0.11
MBD3-203ENST00000585903 CRKLP46109 303 aaKnown RBP14.35□□□□□ -0.11
MBD3-203ENST00000585903 SMIM5Q71RC9 77 aa14.35□□□□□ -0.11
MBD3-203ENST00000585903 SLC52A2Q9HAB3 445 aa14.35□□□□□ -0.11
MBD3-203ENST00000585903 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
MBD3-203ENST00000585903 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
MBD3-203ENST00000585903 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
MBD3-203ENST00000585903 UBR2Q8IWV8 1755 aa14.34□□□□□ -0.11
MBD3-203ENST00000585903 PTCD1O75127 700 aaKnown RBP14.33□□□□□ -0.12
MBD3-203ENST00000585903 DIAPH1O60610 1272 aaKnown RBP14.32□□□□□ -0.12
MBD3-203ENST00000585903 KCPQ6ZWJ8 1503 aa14.31□□□□□ -0.12
MBD3-203ENST00000585903 PCNTO95613 3336 aa14.31□□□□□ -0.12
MBD3-203ENST00000585903 RNMTO43148 476 aaKnown RBP14.31□□□□□ -0.12
MBD3-203ENST00000585903 COL13A1Q5TAT6 717 aaPredicted RBP14.31□□□□□ -0.12
MBD3-203ENST00000585903 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
MBD3-203ENST00000585903 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
MBD3-203ENST00000585903 NRXN2Q9P2S2 1712 aa14.3□□□□□ -0.12
MBD3-203ENST00000585903 TOMM70O94826 608 aa14.3□□□□□ -0.12
MBD3-203ENST00000585903 CYP19A1P11511 503 aaPredicted RBP14.29□□□□□ -0.12
MBD3-203ENST00000585903 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
MBD3-203ENST00000585903 SOS1Q07889 1333 aaPredicted RBP14.29□□□□□ -0.12
MBD3-203ENST00000585903 SIPA1L3O60292 1781 aaPredicted RBP14.29□□□□□ -0.12
MBD3-203ENST00000585903 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 ZPR1O75312 459 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 DPEP1P16444 411 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 KCNA3P22001 575 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 TM4SF1P30408 202 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 MTHFSDQ2M296 383 aaKnown RBP14.28□□□□□ -0.12
MBD3-203ENST00000585903 LGR6Q9HBX8 967 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 PIM2Q9P1W9 311 aa14.28□□□□□ -0.12
MBD3-203ENST00000585903 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.13
MBD3-203ENST00000585903 PRELPP51888 382 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms