RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
ATG4D-202ENST00000585437 C1orf141Q5JVX7 400 aa11.6□□□□□ -0.55
ATG4D-202ENST00000585437 ASAP1Q9ULH1 1129 aa11.6□□□□□ -0.55
ATG4D-202ENST00000585437 MAP3K5Q99683 1374 aa11.59□□□□□ -0.55
ATG4D-202ENST00000585437 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
ATG4D-202ENST00000585437 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
ATG4D-202ENST00000585437 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
ATG4D-202ENST00000585437 ATG3Q9NT62 314 aa11.59□□□□□ -0.55
ATG4D-202ENST00000585437 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
ATG4D-202ENST00000585437 CEMIPQ8WUJ3 1361 aa11.58□□□□□ -0.56
ATG4D-202ENST00000585437 LOC102724428A0A0B4J2F2 783 aa11.58□□□□□ -0.56
ATG4D-202ENST00000585437 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
ATG4D-202ENST00000585437 PTGER2P43116 358 aa11.58□□□□□ -0.56
ATG4D-202ENST00000585437 SIK1P57059 783 aa11.58□□□□□ -0.56
ATG4D-202ENST00000585437 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
ATG4D-202ENST00000585437 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
ATG4D-202ENST00000585437 RALBP1Q15311 655 aa11.57□□□□□ -0.56
ATG4D-202ENST00000585437 SLC4A9Q96Q91 983 aa11.57□□□□□ -0.56
ATG4D-202ENST00000585437 MTFR1LQ9H019 292 aa11.57□□□□□ -0.56
ATG4D-202ENST00000585437 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
ATG4D-202ENST00000585437 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
ATG4D-202ENST00000585437 PRKAR2BP31323 418 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 CABP4P57796 275 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 ITPK1Q13572 414 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 GAS2L2Q8NHY3 880 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 SLC16A10Q8TF71 515 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 LGR6Q9HBX8 967 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 UTRNP46939 3433 aa11.56□□□□□ -0.56
ATG4D-202ENST00000585437 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
ATG4D-202ENST00000585437 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 FCHSD2O94868 740 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 ZBTB7AO95365 584 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 PHACTR3Q96KR7 559 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 TFCP2L1Q9NZI6 479 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
ATG4D-202ENST00000585437 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
ATG4D-202ENST00000585437 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
ATG4D-202ENST00000585437 CNTNAP4Q9C0A0 1308 aa11.54□□□□□ -0.56
ATG4D-202ENST00000585437 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
ATG4D-202ENST00000585437 GNAT3A8MTJ3 354 aa11.53□□□□□ -0.56
ATG4D-202ENST00000585437 SSFA2P28290 1259 aa11.53□□□□□ -0.56
ATG4D-202ENST00000585437 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
ATG4D-202ENST00000585437 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
ATG4D-202ENST00000585437 IL17REQ8NFR9 667 aa11.53□□□□□ -0.56
ATG4D-202ENST00000585437 FLAD1Q8NFF5 587 aa11.52□□□□□ -0.57
ATG4D-202ENST00000585437 PLEKHF1Q96S99 279 aa11.52□□□□□ -0.57
ATG4D-202ENST00000585437 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
ATG4D-202ENST00000585437 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
ATG4D-202ENST00000585437 BRCA1P38398 1863 aaKnown RBP11.51□□□□□ -0.57
ATG4D-202ENST00000585437 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
ATG4D-202ENST00000585437 AK7Q96M32 723 aa11.51□□□□□ -0.57
ATG4D-202ENST00000585437 NRXN2Q9P2S2 1712 aa11.51□□□□□ -0.57
ATG4D-202ENST00000585437 CHD4Q14839 1912 aa11.5□□□□□ -0.57
ATG4D-202ENST00000585437 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
ATG4D-202ENST00000585437 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
ATG4D-202ENST00000585437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
ATG4D-202ENST00000585437 GNPATO15228 680 aa11.49□□□□□ -0.57
ATG4D-202ENST00000585437 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
ATG4D-202ENST00000585437 PTCD1O75127 700 aaKnown RBP11.49□□□□□ -0.57
ATG4D-202ENST00000585437 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
ATG4D-202ENST00000585437 PPP1R1BQ9UD71 204 aaPredicted RBP11.49□□□□□ -0.57
ATG4D-202ENST00000585437 GOLGB1Q14789 3259 aaKnown RBP11.48□□□□□ -0.57
ATG4D-202ENST00000585437 ADRA2BP18089 450 aa11.48□□□□□ -0.57
ATG4D-202ENST00000585437 TEFQ10587 303 aa11.48□□□□□ -0.57
ATG4D-202ENST00000585437 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
ATG4D-202ENST00000585437 ARXQ96QS3 562 aa11.48□□□□□ -0.57
ATG4D-202ENST00000585437 HEG1Q9ULI3 1381 aa11.48□□□□□ -0.57
ATG4D-202ENST00000585437 DLEC1Q9Y238 1755 aa11.48□□□□□ -0.57
ATG4D-202ENST00000585437 RPS6KA4O75676 772 aa11.47□□□□□ -0.57
ATG4D-202ENST00000585437 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
ATG4D-202ENST00000585437 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
ATG4D-202ENST00000585437 SMIM5Q71RC9 77 aa11.47□□□□□ -0.57
ATG4D-202ENST00000585437 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
ATG4D-202ENST00000585437 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.57
ATG4D-202ENST00000585437 PHF14O94880 888 aa11.46□□□□□ -0.57
ATG4D-202ENST00000585437 POLD1P28340 1107 aa11.46□□□□□ -0.57
ATG4D-202ENST00000585437 NFE2L2Q16236 605 aa11.46□□□□□ -0.57
ATG4D-202ENST00000585437 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.57
ATG4D-202ENST00000585437 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.57
ATG4D-202ENST00000585437 ZNF496Q96IT1 587 aaPredicted RBP11.46□□□□□ -0.57
ATG4D-202ENST00000585437 SYT17Q9BSW7 474 aa11.46□□□□□ -0.57
ATG4D-202ENST00000585437 RTCBQ9Y3I0 505 aaKnown RBP11.46□□□□□ -0.57
ATG4D-202ENST00000585437 SOS1Q07889 1333 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-202ENST00000585437 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-202ENST00000585437 CYP19A1P11511 503 aaPredicted RBP11.45□□□□□ -0.58
ATG4D-202ENST00000585437 MCM10Q7L590 875 aa11.45□□□□□ -0.58
ATG4D-202ENST00000585437 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
ATG4D-202ENST00000585437 CCDC87Q9NVE4 849 aa11.45□□□□□ -0.58
ATG4D-202ENST00000585437 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 COL15A1P39059 1388 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 MAPK8IP3Q9UPT6 1336 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 MSH5O43196 834 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 TTC5Q8N0Z6 440 aa11.44□□□□□ -0.58
ATG4D-202ENST00000585437 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms