RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CARD10Q9BWT7 1032 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 STK32BQ9NY57 414 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 PHRF1Q9P1Y6 1649 aaKnown RBP7.69□□□□□ -1.18
VAPA-207ENST00000583879 BCL9O00512 1426 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 NRKQ7Z2Y5 1582 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 LMO7Q8WWI1 1683 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 HRO43593 1189 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 TBC1D12O60347 775 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 FOXK1P85037 733 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 USP6P35125 1406 aa7.68□□□□□ -1.18
VAPA-207ENST00000583879 RREB1Q92766 1687 aa7.67□□□□□ -1.18
VAPA-207ENST00000583879 ITSN1Q15811 1721 aa7.67□□□□□ -1.18
VAPA-207ENST00000583879 ARHGEF28Q8N1W1 1705 aaKnown RBP7.67□□□□□ -1.18
VAPA-207ENST00000583879 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
VAPA-207ENST00000583879 ZNF784Q8NCA9 323 aaPredicted RBP7.67□□□□□ -1.18
VAPA-207ENST00000583879 KCTD12Q96CX2 325 aaKnown RBP7.67□□□□□ -1.18
VAPA-207ENST00000583879 FHDC1Q9C0D6 1143 aaPredicted RBP7.67□□□□□ -1.18
VAPA-207ENST00000583879 MTFR1LQ9H019 292 aa7.67□□□□□ -1.18
VAPA-207ENST00000583879 TTC21BQ7Z4L5 1316 aa7.67□□□□□ -1.18
VAPA-207ENST00000583879 EVC2Q86UK5 1308 aa7.67□□□□□ -1.18
VAPA-207ENST00000583879 NUP188Q5SRE5 1749 aa7.66□□□□□ -1.18
VAPA-207ENST00000583879 TOPAZ1Q8N9V7 1692 aa7.65□□□□□ -1.18
VAPA-207ENST00000583879 ARXQ96QS3 562 aa7.65□□□□□ -1.18
VAPA-207ENST00000583879 GPHNQ9NQX3 736 aaPredicted RBP7.65□□□□□ -1.18
VAPA-207ENST00000583879 PARP4Q9UKK3 1724 aaKnown RBP7.65□□□□□ -1.18
VAPA-207ENST00000583879 PEAK1Q9H792 1746 aa7.64□□□□□ -1.19
VAPA-207ENST00000583879 SLIT3O75094 1523 aa7.64□□□□□ -1.19
VAPA-207ENST00000583879 CPSF1Q10570 1443 aaKnown RBP7.64□□□□□ -1.19
VAPA-207ENST00000583879 CCDC7Q96M83 1385 aa7.64□□□□□ -1.19
VAPA-207ENST00000583879 TTC21AQ8NDW8 1320 aa7.64□□□□□ -1.19
VAPA-207ENST00000583879 L3MBTL2Q969R5 705 aa7.64□□□□□ -1.19
VAPA-207ENST00000583879 ACSBG1Q96GR2 724 aa7.64□□□□□ -1.19
VAPA-207ENST00000583879 C1QTNF8P60827 252 aa7.63□□□□□ -1.19
VAPA-207ENST00000583879 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
VAPA-207ENST00000583879 IL2RBP14784 551 aa7.62□□□□□ -1.19
VAPA-207ENST00000583879 DSG2Q14126 1118 aa7.62□□□□□ -1.19
VAPA-207ENST00000583879 NLRP2Q9NX02 1062 aa7.62□□□□□ -1.19
VAPA-207ENST00000583879 KIAA1210Q9ULL0 1709 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 KTN1Q86UP2 1357 aaKnown RBP7.61□□□□□ -1.19
VAPA-207ENST00000583879 LRRC37A3O60309 1634 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 SENP3-EIF4A1A0A087X0R7 540 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 GPR162Q16538 588 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 ZNF827Q17R98 1081 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.61□□□□□ -1.19
VAPA-207ENST00000583879 SLC16A10Q8TF71 515 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 LRRC4BQ9NT99 713 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 RGPD3A6NKT7 1758 aaPredicted RBP7.61□□□□□ -1.19
VAPA-207ENST00000583879 COL18A1P39060 1754 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 RGPD4Q7Z3J3 1758 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 CASZ1Q86V15 1759 aa7.61□□□□□ -1.19
VAPA-207ENST00000583879 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
VAPA-207ENST00000583879 MAP3K5Q99683 1374 aa7.6□□□□□ -1.19
VAPA-207ENST00000583879 SLC27A3Q5K4L6 730 aa7.6□□□□□ -1.19
VAPA-207ENST00000583879 NME9Q86XW9 330 aa7.6□□□□□ -1.19
VAPA-207ENST00000583879 ANKRD24Q8TF21 1146 aa7.6□□□□□ -1.19
VAPA-207ENST00000583879 SIN3AQ96ST3 1273 aa7.6□□□□□ -1.19
VAPA-207ENST00000583879 RTN4Q9NQC3 1192 aaKnown RBP7.6□□□□□ -1.19
VAPA-207ENST00000583879 UTRNP46939 3433 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 POLD1P28340 1107 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 PTPN5P54829 565 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
VAPA-207ENST00000583879 SLC12A5Q9H2X9 1139 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 VPS9D1Q9Y2B5 631 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 TNS2Q63HR2 1409 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 SBF2Q86WG5 1849 aa7.59□□□□□ -1.19
VAPA-207ENST00000583879 ROCK2O75116 1388 aaKnown RBP7.59□□□□□ -1.2
VAPA-207ENST00000583879 PIK3C2AO00443 1686 aa7.58□□□□□ -1.2
VAPA-207ENST00000583879 NEUROD1Q13562 356 aa7.58□□□□□ -1.2
VAPA-207ENST00000583879 HDGFL2Q7Z4V5 671 aaPredicted RBP7.58□□□□□ -1.2
VAPA-207ENST00000583879 TMC1Q8TDI8 760 aa7.58□□□□□ -1.2
VAPA-207ENST00000583879 TFCP2L1Q9NZI6 479 aa7.58□□□□□ -1.2
VAPA-207ENST00000583879 NFAT5O94916 1531 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 MYOM1P52179 1685 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 PRIM1P49642 420 aaKnown RBP7.57□□□□□ -1.2
VAPA-207ENST00000583879 KCNQ4P56696 695 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 HS6ST3Q8IZP7 471 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 IP6K1Q92551 441 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 SBNO2Q9Y2G9 1366 aa7.57□□□□□ -1.2
VAPA-207ENST00000583879 TRPM1Q7Z4N2 1603 aa7.56□□□□□ -1.2
VAPA-207ENST00000583879 PNPLA7Q6ZV29 1317 aa7.56□□□□□ -1.2
VAPA-207ENST00000583879 GIGYF1O75420 1035 aaPredicted RBP7.56□□□□□ -1.2
VAPA-207ENST00000583879 SYTL4Q96C24 671 aaPredicted RBP7.56□□□□□ -1.2
VAPA-207ENST00000583879 LTV1Q96GA3 475 aaPredicted RBP7.56□□□□□ -1.2
VAPA-207ENST00000583879 PUS7Q96PZ0 661 aaKnown RBP7.56□□□□□ -1.2
VAPA-207ENST00000583879 TERF2IPQ9NYB0 399 aa7.56□□□□□ -1.2
VAPA-207ENST00000583879 ABCC6O95255 1503 aa7.56□□□□□ -1.2
VAPA-207ENST00000583879 QRICH2Q9H0J4 1663 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 GRIN3BO60391 1043 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 RGS20O76081 388 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 NLGN2Q8NFZ4 835 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 ZCRB1Q8TBF4 217 aaKnown RBP7.55□□□□□ -1.2
VAPA-207ENST00000583879 OXER1Q8TDS5 423 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 CARD11Q9BXL7 1154 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 SLC4A5Q9BY07 1137 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 BCL2L12Q9HB09 334 aa7.55□□□□□ -1.2
VAPA-207ENST00000583879 GOLGA8CPA6NN73 597 aa7.54□□□□□ -1.2
VAPA-207ENST00000583879 IFFO2Q5TF58 517 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms