RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 YY1P25490 414 aa11.15□□□□□ -0.62
SMCHD1-210ENST00000583800 CDCA7Q9BWT1 371 aaPredicted RBP11.15□□□□□ -0.62
SMCHD1-210ENST00000583800 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.62
SMCHD1-210ENST00000583800 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
SMCHD1-210ENST00000583800 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
SMCHD1-210ENST00000583800 TNS2Q63HR2 1409 aa11.15□□□□□ -0.62
SMCHD1-210ENST00000583800 BTAF1O14981 1849 aa11.14□□□□□ -0.63
SMCHD1-210ENST00000583800 NEUROD1Q13562 356 aa11.14□□□□□ -0.63
SMCHD1-210ENST00000583800 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
SMCHD1-210ENST00000583800 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
SMCHD1-210ENST00000583800 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
SMCHD1-210ENST00000583800 PAPPAQ13219 1627 aa11.13□□□□□ -0.63
SMCHD1-210ENST00000583800 EXOC5O00471 708 aa11.12□□□□□ -0.63
SMCHD1-210ENST00000583800 ZBTB7AO95365 584 aa11.12□□□□□ -0.63
SMCHD1-210ENST00000583800 TXNRD1Q16881 649 aa11.12□□□□□ -0.63
SMCHD1-210ENST00000583800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMCHD1-210ENST00000583800 NME9Q86XW9 330 aa11.11□□□□□ -0.63
SMCHD1-210ENST00000583800 STK32BQ9NY57 414 aa11.11□□□□□ -0.63
SMCHD1-210ENST00000583800 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
SMCHD1-210ENST00000583800 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
SMCHD1-210ENST00000583800 ERBB3P21860 1342 aa11.1□□□□□ -0.63
SMCHD1-210ENST00000583800 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
SMCHD1-210ENST00000583800 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
SMCHD1-210ENST00000583800 ACSBG1Q96GR2 724 aa11.1□□□□□ -0.63
SMCHD1-210ENST00000583800 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
SMCHD1-210ENST00000583800 CHD4Q14839 1912 aa11.09□□□□□ -0.63
SMCHD1-210ENST00000583800 RGPD2P0DJD1 1756 aa11.09□□□□□ -0.63
SMCHD1-210ENST00000583800 PTGER2P43116 358 aa11.09□□□□□ -0.63
SMCHD1-210ENST00000583800 SLC15A2Q16348 729 aa11.09□□□□□ -0.63
SMCHD1-210ENST00000583800 NLRP2Q9NX02 1062 aa11.09□□□□□ -0.63
SMCHD1-210ENST00000583800 TUBGCP6Q96RT7 1819 aa11.09□□□□□ -0.63
SMCHD1-210ENST00000583800 TMEM132AQ24JP5 1023 aa11.08□□□□□ -0.64
SMCHD1-210ENST00000583800 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
SMCHD1-210ENST00000583800 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
SMCHD1-210ENST00000583800 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
SMCHD1-210ENST00000583800 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
SMCHD1-210ENST00000583800 QSER1Q2KHR3 1735 aa11.07□□□□□ -0.64
SMCHD1-210ENST00000583800 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
SMCHD1-210ENST00000583800 A0A1W2PP64 1363 aa11.07□□□□□ -0.64
SMCHD1-210ENST00000583800 IL2RBP14784 551 aa11.07□□□□□ -0.64
SMCHD1-210ENST00000583800 ANKRD24Q8TF21 1146 aa11.07□□□□□ -0.64
SMCHD1-210ENST00000583800 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
SMCHD1-210ENST00000583800 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
SMCHD1-210ENST00000583800 FHDC1Q9C0D6 1143 aaPredicted RBP11.06□□□□□ -0.64
SMCHD1-210ENST00000583800 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
SMCHD1-210ENST00000583800 G3V3G9 751 aa11.05□□□□□ -0.64
SMCHD1-210ENST00000583800 HOXB1P14653 301 aaPredicted RBP11.05□□□□□ -0.64
SMCHD1-210ENST00000583800 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
SMCHD1-210ENST00000583800 LY75O60449 1722 aa11.04□□□□□ -0.64
SMCHD1-210ENST00000583800 ZNF827Q17R98 1081 aa11.04□□□□□ -0.64
SMCHD1-210ENST00000583800 SYT17Q9BSW7 474 aa11.04□□□□□ -0.64
SMCHD1-210ENST00000583800 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
SMCHD1-210ENST00000583800 UTRNP46939 3433 aa11.03□□□□□ -0.64
SMCHD1-210ENST00000583800 LTV1Q96GA3 475 aaPredicted RBP11.03□□□□□ -0.64
SMCHD1-210ENST00000583800 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
SMCHD1-210ENST00000583800 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
SMCHD1-210ENST00000583800 LRRC4BQ9NT99 713 aa11.02□□□□□ -0.65
SMCHD1-210ENST00000583800 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
SMCHD1-210ENST00000583800 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
SMCHD1-210ENST00000583800 IP6K1Q92551 441 aa11.01□□□□□ -0.65
SMCHD1-210ENST00000583800 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
SMCHD1-210ENST00000583800 MEGF6O75095 1541 aa11□□□□□ -0.65
SMCHD1-210ENST00000583800 HOMEZQ8IX15 550 aa11□□□□□ -0.65
SMCHD1-210ENST00000583800 ZNF784Q8NCA9 323 aaPredicted RBP11□□□□□ -0.65
SMCHD1-210ENST00000583800 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
SMCHD1-210ENST00000583800 FBLN1P23142 703 aa10.99□□□□□ -0.65
SMCHD1-210ENST00000583800 HOXC9P31274 260 aa10.99□□□□□ -0.65
SMCHD1-210ENST00000583800 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
SMCHD1-210ENST00000583800 HS6ST3Q8IZP7 471 aa10.99□□□□□ -0.65
SMCHD1-210ENST00000583800 NSD2O96028 1365 aa10.99□□□□□ -0.65
SMCHD1-210ENST00000583800 MAP3K5Q99683 1374 aa10.99□□□□□ -0.65
SMCHD1-210ENST00000583800 KCNQ4P56696 695 aa10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 SYTL4Q96C24 671 aaPredicted RBP10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 COG3Q96JB2 828 aa10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 TESK2Q96S53 571 aa10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 PNPLA7Q6ZV29 1317 aa10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
SMCHD1-210ENST00000583800 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
SMCHD1-210ENST00000583800 AMPHP49418 695 aa10.97□□□□□ -0.65
SMCHD1-210ENST00000583800 SLC27A3Q5K4L6 730 aa10.97□□□□□ -0.65
SMCHD1-210ENST00000583800 C5P01031 1676 aa10.97□□□□□ -0.65
SMCHD1-210ENST00000583800 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
SMCHD1-210ENST00000583800 RTL1A6NKG5 1358 aa10.96□□□□□ -0.65
SMCHD1-210ENST00000583800 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
SMCHD1-210ENST00000583800 ITGB4P16144 1822 aa10.95□□□□□ -0.66
SMCHD1-210ENST00000583800 TOGARAM1Q9Y4F4 1720 aa10.95□□□□□ -0.66
SMCHD1-210ENST00000583800 RRS1Q15050 365 aaKnown RBP10.95□□□□□ -0.66
SMCHD1-210ENST00000583800 USHBP1Q8N6Y0 703 aa10.95□□□□□ -0.66
SMCHD1-210ENST00000583800 TFCP2L1Q9NZI6 479 aa10.95□□□□□ -0.66
SMCHD1-210ENST00000583800 POLD1P28340 1107 aa10.94□□□□□ -0.66
SMCHD1-210ENST00000583800 GPR162Q16538 588 aa10.94□□□□□ -0.66
SMCHD1-210ENST00000583800 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
SMCHD1-210ENST00000583800 SLC16A10Q8TF71 515 aa10.94□□□□□ -0.66
SMCHD1-210ENST00000583800 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
SMCHD1-210ENST00000583800 GGNBP2Q9H3C7 697 aa10.94□□□□□ -0.66
SMCHD1-210ENST00000583800 NBPF6Q5VWK0 638 aa10.93□□□□□ -0.66
SMCHD1-210ENST00000583800 NLGN2Q8NFZ4 835 aa10.93□□□□□ -0.66
SMCHD1-210ENST00000583800 NBPF4Q96M43 638 aa10.93□□□□□ -0.66
SMCHD1-210ENST00000583800 CCNL1Q9UK58 526 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms