RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 SUPT16HQ9Y5B9 1047 aaKnown RBP23.49■■□□□ 1.35
NDEL1-217ENST00000583683 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
NDEL1-217ENST00000583683 BTBD11A6QL63 1104 aa23.48■■□□□ 1.35
NDEL1-217ENST00000583683 ONECUT3O60422 494 aaPredicted RBP23.48■■□□□ 1.35
NDEL1-217ENST00000583683 CT47B1P0C2W7 299 aaPredicted RBP23.48■■□□□ 1.35
NDEL1-217ENST00000583683 MYT1Q01538 1121 aa23.48■■□□□ 1.35
NDEL1-217ENST00000583683 ZNF772Q68DY9 489 aaPredicted RBP23.48■■□□□ 1.35
NDEL1-217ENST00000583683 ERVV-2B6SEH9 535 aa23.47■■□□□ 1.35
NDEL1-217ENST00000583683 C8orf58Q8NAV2 365 aa23.47■■□□□ 1.35
NDEL1-217ENST00000583683 CABP4P57796 275 aa23.47■■□□□ 1.35
NDEL1-217ENST00000583683 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
NDEL1-217ENST00000583683 MARCH10Q8NA82 808 aaPredicted RBP23.47■■□□□ 1.35
NDEL1-217ENST00000583683 ITGB4P16144 1822 aa23.46■■□□□ 1.35
NDEL1-217ENST00000583683 KRT24Q2M2I5 525 aa23.45■■□□□ 1.34
NDEL1-217ENST00000583683 A0A0G2JS52 829 aa23.45■■□□□ 1.34
NDEL1-217ENST00000583683 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
NDEL1-217ENST00000583683 ELL2O00472 640 aaPredicted RBP23.43■■□□□ 1.34
NDEL1-217ENST00000583683 KCNQ3O43525 872 aa23.43■■□□□ 1.34
NDEL1-217ENST00000583683 VAMP4O75379 141 aa23.43■■□□□ 1.34
NDEL1-217ENST00000583683 TWISTNBQ3B726 338 aaPredicted RBP23.43■■□□□ 1.34
NDEL1-217ENST00000583683 KAT6BQ8WYB5 2073 aa23.43■■□□□ 1.34
NDEL1-217ENST00000583683 RNF123Q5XPI4 1314 aa23.43■■□□□ 1.34
NDEL1-217ENST00000583683 RARSP54136 660 aaKnown RBP23.43■■□□□ 1.34
NDEL1-217ENST00000583683 EIF4A1P60842 406 aaKnown RBP23.41■■□□□ 1.34
NDEL1-217ENST00000583683 PAPPAQ13219 1627 aa23.41■■□□□ 1.34
NDEL1-217ENST00000583683 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
NDEL1-217ENST00000583683 SLC39A6Q13433 755 aa23.4■■□□□ 1.34
NDEL1-217ENST00000583683 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
NDEL1-217ENST00000583683 ZNF428Q96B54 188 aa23.4■■□□□ 1.34
NDEL1-217ENST00000583683 BCAR3O75815 825 aa23.39■■□□□ 1.33
NDEL1-217ENST00000583683 RBM6P78332 1123 aaKnown RBP23.38■■□□□ 1.33
NDEL1-217ENST00000583683 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
NDEL1-217ENST00000583683 RGS17Q9UGC6 210 aaPredicted RBP23.38■■□□□ 1.33
NDEL1-217ENST00000583683 UBR2Q8IWV8 1755 aa23.38■■□□□ 1.33
NDEL1-217ENST00000583683 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
NDEL1-217ENST00000583683 HEG1Q9ULI3 1381 aa23.37■■□□□ 1.33
NDEL1-217ENST00000583683 BCL9O00512 1426 aa23.37■■□□□ 1.33
NDEL1-217ENST00000583683 RRP1P56182 461 aaKnown RBP23.36■■□□□ 1.33
NDEL1-217ENST00000583683 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
NDEL1-217ENST00000583683 PIGBQ92521 554 aa23.36■■□□□ 1.33
NDEL1-217ENST00000583683 BCL2L13Q9BXK5 485 aa23.36■■□□□ 1.33
NDEL1-217ENST00000583683 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
NDEL1-217ENST00000583683 ALDH1L2Q3SY69 923 aa23.36■■□□□ 1.33
NDEL1-217ENST00000583683 SOS1Q07889 1333 aaPredicted RBP23.35■■□□□ 1.33
NDEL1-217ENST00000583683 TTC5Q8N0Z6 440 aa23.34■■□□□ 1.33
NDEL1-217ENST00000583683 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
NDEL1-217ENST00000583683 ZNF496Q96IT1 587 aaPredicted RBP23.33■■□□□ 1.33
NDEL1-217ENST00000583683 SMC4Q9NTJ3 1288 aa23.33■■□□□ 1.33
NDEL1-217ENST00000583683 GIGYF1O75420 1035 aaPredicted RBP23.33■■□□□ 1.32
NDEL1-217ENST00000583683 ACSBG1Q96GR2 724 aa23.33■■□□□ 1.32
NDEL1-217ENST00000583683 C5P01031 1676 aa23.32■■□□□ 1.32
NDEL1-217ENST00000583683 KCPQ6ZWJ8 1503 aa23.32■■□□□ 1.32
NDEL1-217ENST00000583683 HOXB7P09629 217 aa23.32■■□□□ 1.32
NDEL1-217ENST00000583683 PLIN1O60240 522 aa23.31■■□□□ 1.32
NDEL1-217ENST00000583683 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
NDEL1-217ENST00000583683 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
NDEL1-217ENST00000583683 RXRBP28702 533 aa23.31■■□□□ 1.32
NDEL1-217ENST00000583683 ILDR1Q86SU0 546 aaPredicted RBP23.31■■□□□ 1.32
NDEL1-217ENST00000583683 FMNL2Q96PY5 1086 aa23.31■■□□□ 1.32
NDEL1-217ENST00000583683 ASAP1Q9ULH1 1129 aa23.31■■□□□ 1.32
NDEL1-217ENST00000583683 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
NDEL1-217ENST00000583683 ATG3Q9NT62 314 aa23.3■■□□□ 1.32
NDEL1-217ENST00000583683 EP400Q96L91 3159 aa23.3■■□□□ 1.32
NDEL1-217ENST00000583683 BRPF1P55201 1214 aaPredicted RBP23.29■■□□□ 1.32
NDEL1-217ENST00000583683 POTEAQ6S8J7 498 aa23.29■■□□□ 1.32
NDEL1-217ENST00000583683 CACNA1FO60840 1977 aa23.29■■□□□ 1.32
NDEL1-217ENST00000583683 NHSQ6T4R5 1651 aa23.29■■□□□ 1.32
NDEL1-217ENST00000583683 PRAMEF22A3QJZ6 481 aa23.29■■□□□ 1.32
NDEL1-217ENST00000583683 KCNQ2O43526 872 aa23.29■■□□□ 1.32
NDEL1-217ENST00000583683 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
NDEL1-217ENST00000583683 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.28■■□□□ 1.32
NDEL1-217ENST00000583683 IRX6P78412 446 aaPredicted RBP23.27■■□□□ 1.32
NDEL1-217ENST00000583683 HDGFL1Q5TGJ6 251 aa23.27■■□□□ 1.32
NDEL1-217ENST00000583683 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
NDEL1-217ENST00000583683 LAMB4A4D0S4 1761 aa23.27■■□□□ 1.31
NDEL1-217ENST00000583683 NEFLP07196 543 aa23.26■■□□□ 1.31
NDEL1-217ENST00000583683 SNRPA1P09661 255 aaKnown RBP23.26■■□□□ 1.31
NDEL1-217ENST00000583683 CCDC30Q5VVM6 783 aa23.26■■□□□ 1.31
NDEL1-217ENST00000583683 KRT27Q7Z3Y8 459 aa23.26■■□□□ 1.31
NDEL1-217ENST00000583683 NECTIN2Q92692 538 aa23.26■■□□□ 1.31
NDEL1-217ENST00000583683 PTCD1O75127 700 aaKnown RBP23.26■■□□□ 1.31
NDEL1-217ENST00000583683 KIF16BQ96L93 1317 aa23.25■■□□□ 1.31
NDEL1-217ENST00000583683 EIF2S2P20042 333 aaKnown RBP23.25■■□□□ 1.31
NDEL1-217ENST00000583683 NOB1Q9ULX3 412 aaKnown RBP23.24■■□□□ 1.31
NDEL1-217ENST00000583683 RGS12O14924 1447 aa23.24■■□□□ 1.31
NDEL1-217ENST00000583683 CHMP4AQ9BY43 222 aa23.24■■□□□ 1.31
NDEL1-217ENST00000583683 BTAF1O14981 1849 aa23.23■■□□□ 1.31
NDEL1-217ENST00000583683 SLC4A2P04920 1241 aa23.23■■□□□ 1.31
NDEL1-217ENST00000583683 CANXP27824 592 aaKnown RBP23.23■■□□□ 1.31
NDEL1-217ENST00000583683 STK31Q9BXU1 1019 aa23.23■■□□□ 1.31
NDEL1-217ENST00000583683 FKBP8Q14318 412 aa23.22■■□□□ 1.31
NDEL1-217ENST00000583683 C20orf194Q5TEA3 1177 aa23.22■■□□□ 1.31
NDEL1-217ENST00000583683 PTF1AQ7RTS3 328 aa23.22■■□□□ 1.31
NDEL1-217ENST00000583683 ZKSCAN2Q63HK3 967 aa23.22■■□□□ 1.31
NDEL1-217ENST00000583683 USP16Q9Y5T5 823 aa23.22■■□□□ 1.31
NDEL1-217ENST00000583683 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
NDEL1-217ENST00000583683 VSIG10Q8N0Z9 540 aa23.2■■□□□ 1.3
NDEL1-217ENST00000583683 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
NDEL1-217ENST00000583683 TRIM27P14373 513 aa23.19■■□□□ 1.3
NDEL1-217ENST00000583683 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms