RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
TSEN54-210ENST00000583634 NEFMP07197 916 aa16.05■□□□□ 0.16
TSEN54-210ENST00000583634 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSEN54-210ENST00000583634 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
TSEN54-210ENST00000583634 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
TSEN54-210ENST00000583634 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
TSEN54-210ENST00000583634 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
TSEN54-210ENST00000583634 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
TSEN54-210ENST00000583634 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
TSEN54-210ENST00000583634 EYA1Q99502 592 aa16.04■□□□□ 0.16
TSEN54-210ENST00000583634 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
TSEN54-210ENST00000583634 C5P01031 1676 aa16.03■□□□□ 0.16
TSEN54-210ENST00000583634 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
TSEN54-210ENST00000583634 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
TSEN54-210ENST00000583634 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
TSEN54-210ENST00000583634 CCDC146Q8IYE0 955 aa16.02■□□□□ 0.16
TSEN54-210ENST00000583634 RSPH6AQ9H0K4 717 aa16.02■□□□□ 0.16
TSEN54-210ENST00000583634 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
TSEN54-210ENST00000583634 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
TSEN54-210ENST00000583634 HMOX1P09601 288 aa16.01■□□□□ 0.15
TSEN54-210ENST00000583634 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
TSEN54-210ENST00000583634 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
TSEN54-210ENST00000583634 TOGARAM1Q9Y4F4 1720 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 PHF14O94880 888 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 PRKAR2BP31323 418 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 PIGBQ92521 554 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 ITGB4P16144 1822 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 KDRP35968 1356 aa16■□□□□ 0.15
TSEN54-210ENST00000583634 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
TSEN54-210ENST00000583634 AK7Q96M32 723 aa15.99■□□□□ 0.15
TSEN54-210ENST00000583634 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
TSEN54-210ENST00000583634 APAF1O14727 1248 aa15.98■□□□□ 0.15
TSEN54-210ENST00000583634 C4BP0C0L5 1744 aa15.98■□□□□ 0.15
TSEN54-210ENST00000583634 SMARCC1Q92922 1105 aaPredicted RBP15.98■□□□□ 0.15
TSEN54-210ENST00000583634 ATP10DQ9P241 1426 aa15.98■□□□□ 0.15
TSEN54-210ENST00000583634 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
TSEN54-210ENST00000583634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
TSEN54-210ENST00000583634 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
TSEN54-210ENST00000583634 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-210ENST00000583634 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
TSEN54-210ENST00000583634 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
TSEN54-210ENST00000583634 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
TSEN54-210ENST00000583634 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-210ENST00000583634 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
TSEN54-210ENST00000583634 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
TSEN54-210ENST00000583634 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
TSEN54-210ENST00000583634 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
TSEN54-210ENST00000583634 SIK1P57059 783 aa15.94■□□□□ 0.14
TSEN54-210ENST00000583634 PHACTR3Q96KR7 559 aa15.94■□□□□ 0.14
TSEN54-210ENST00000583634 GPBP1L1Q9HC44 474 aaPredicted RBP15.94■□□□□ 0.14
TSEN54-210ENST00000583634 ASAP1Q9ULH1 1129 aa15.94■□□□□ 0.14
TSEN54-210ENST00000583634 PLEKHG2Q9H7P9 1386 aa15.93■□□□□ 0.14
TSEN54-210ENST00000583634 ITPK1Q13572 414 aa15.93■□□□□ 0.14
TSEN54-210ENST00000583634 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
TSEN54-210ENST00000583634 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
TSEN54-210ENST00000583634 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
TSEN54-210ENST00000583634 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
TSEN54-210ENST00000583634 SSFA2P28290 1259 aa15.92■□□□□ 0.14
TSEN54-210ENST00000583634 GAS2L2Q8NHY3 880 aa15.92■□□□□ 0.14
TSEN54-210ENST00000583634 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
TSEN54-210ENST00000583634 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
TSEN54-210ENST00000583634 GNPATO15228 680 aa15.91■□□□□ 0.14
TSEN54-210ENST00000583634 PHKG2P15735 406 aa15.91■□□□□ 0.14
TSEN54-210ENST00000583634 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
TSEN54-210ENST00000583634 RIPK4P57078 832 aa15.91■□□□□ 0.14
TSEN54-210ENST00000583634 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
TSEN54-210ENST00000583634 AMOTQ4VCS5 1084 aa15.91■□□□□ 0.14
TSEN54-210ENST00000583634 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
TSEN54-210ENST00000583634 ADCY9O60503 1353 aa15.9■□□□□ 0.14
TSEN54-210ENST00000583634 LMOD3Q0VAK6 560 aa15.9■□□□□ 0.14
TSEN54-210ENST00000583634 IFNL2Q8IZJ0 200 aa15.9■□□□□ 0.14
TSEN54-210ENST00000583634 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
TSEN54-210ENST00000583634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.14
TSEN54-210ENST00000583634 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
TSEN54-210ENST00000583634 MTHFSDQ2M296 383 aaKnown RBP15.88■□□□□ 0.13
TSEN54-210ENST00000583634 WDR63Q8IWG1 891 aa15.88■□□□□ 0.13
TSEN54-210ENST00000583634 WWC1Q8IX03 1113 aa15.88■□□□□ 0.13
TSEN54-210ENST00000583634 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
TSEN54-210ENST00000583634 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
TSEN54-210ENST00000583634 MMP10P09238 476 aa15.87■□□□□ 0.13
TSEN54-210ENST00000583634 CEP350Q5VT06 3117 aa15.86■□□□□ 0.13
TSEN54-210ENST00000583634 GOLGA2Q08379 1002 aa15.86■□□□□ 0.13
TSEN54-210ENST00000583634 IFFO2Q5TF58 517 aa15.86■□□□□ 0.13
TSEN54-210ENST00000583634 SLC4A9Q96Q91 983 aa15.86■□□□□ 0.13
TSEN54-210ENST00000583634 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
TSEN54-210ENST00000583634 HSPA6P17066 643 aa15.85■□□□□ 0.13
TSEN54-210ENST00000583634 CALD1Q05682 793 aaKnown RBP15.85■□□□□ 0.13
TSEN54-210ENST00000583634 RTF1Q92541 710 aaKnown RBP15.85■□□□□ 0.13
TSEN54-210ENST00000583634 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
TSEN54-210ENST00000583634 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
TSEN54-210ENST00000583634 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
TSEN54-210ENST00000583634 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
TSEN54-210ENST00000583634 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
TSEN54-210ENST00000583634 KIF3CO14782 793 aa15.83■□□□□ 0.12
TSEN54-210ENST00000583634 AKAP4Q5JQC9 854 aa15.83■□□□□ 0.12
TSEN54-210ENST00000583634 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
TSEN54-210ENST00000583634 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
TSEN54-210ENST00000583634 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms