RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 KDM6AO15550 1401 aaPredicted RBP7.01□□□□□ -1.29
CRLF3-204ENST00000583527 CHL1O00533 1208 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 IPO8O15397 1037 aaKnown RBP7.01□□□□□ -1.29
CRLF3-204ENST00000583527 VAMP4O75379 141 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 PLEKHG5O94827 1062 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 KCNA4P22459 653 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 ANKRD24Q8TF21 1146 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 DDX17Q92841 729 aaKnown RBP7.01□□□□□ -1.29
CRLF3-204ENST00000583527 TSPYL4Q9UJ04 414 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 PCDHB15Q9Y5E8 787 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 PHLPP1O60346 1717 aa7.01□□□□□ -1.29
CRLF3-204ENST00000583527 GNAT3A8MTJ3 354 aa7□□□□□ -1.29
CRLF3-204ENST00000583527 HTATSF1O43719 755 aaKnown RBP7□□□□□ -1.29
CRLF3-204ENST00000583527 HAP1P54257 671 aaPredicted RBP7□□□□□ -1.29
CRLF3-204ENST00000583527 NBPF6Q5VWK0 638 aa7□□□□□ -1.29
CRLF3-204ENST00000583527 ZNF530Q6P9A1 599 aaPredicted RBP7□□□□□ -1.29
CRLF3-204ENST00000583527 NBPF4Q96M43 638 aa7□□□□□ -1.29
CRLF3-204ENST00000583527 API5Q9BZZ5 524 aaKnown RBP7□□□□□ -1.29
CRLF3-204ENST00000583527 TNKS1BP1Q9C0C2 1729 aaKnown RBP7□□□□□ -1.29
CRLF3-204ENST00000583527 ARFGEF2Q9Y6D5 1785 aa7□□□□□ -1.29
CRLF3-204ENST00000583527 NUP188Q5SRE5 1749 aa6.99□□□□□ -1.29
CRLF3-204ENST00000583527 ELL2O00472 640 aaPredicted RBP6.99□□□□□ -1.29
CRLF3-204ENST00000583527 IGHDP01880 384 aa6.99□□□□□ -1.29
CRLF3-204ENST00000583527 RGS3P49796 1198 aa6.99□□□□□ -1.29
CRLF3-204ENST00000583527 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
CRLF3-204ENST00000583527 AFDNP55196 1824 aaKnown RBP6.99□□□□□ -1.29
CRLF3-204ENST00000583527 PTPRCP08575 1304 aa6.99□□□□□ -1.29
CRLF3-204ENST00000583527 SOS1Q07889 1333 aaPredicted RBP6.99□□□□□ -1.29
CRLF3-204ENST00000583527 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
CRLF3-204ENST00000583527 HDAC1Q13547 482 aaPredicted RBP6.98□□□□□ -1.29
CRLF3-204ENST00000583527 ZBTB40Q9NUA8 1239 aa6.98□□□□□ -1.29
CRLF3-204ENST00000583527 DOT1LQ8TEK3 1739 aa6.98□□□□□ -1.29
CRLF3-204ENST00000583527 LRP6O75581 1613 aa6.98□□□□□ -1.29
CRLF3-204ENST00000583527 PDE4AP27815 886 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 ANP32AP39687 249 aaKnown RBP6.97□□□□□ -1.29
CRLF3-204ENST00000583527 ZC3H6P61129 1189 aaKnown RBP6.97□□□□□ -1.29
CRLF3-204ENST00000583527 TJP1Q07157 1748 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 C8orf34Q49A92 452 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 IL17REQ8NFR9 667 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 BACH2Q9BYV9 841 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 C1orf115Q9H7X2 142 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 ATF5Q9Y2D1 282 aaPredicted RBP6.97□□□□□ -1.29
CRLF3-204ENST00000583527 AXIN2Q9Y2T1 843 aa6.97□□□□□ -1.29
CRLF3-204ENST00000583527 NWD2Q9ULI1 1742 aa6.96□□□□□ -1.29
CRLF3-204ENST00000583527 GABBR2O75899 941 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 FAM161AQ3B820 660 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 AMOTQ4VCS5 1084 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 AKAP4Q5JQC9 854 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 C1orf141Q5JVX7 400 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 RWDD1Q9H446 243 aaPredicted RBP6.96□□□□□ -1.3
CRLF3-204ENST00000583527 BABAM1Q9NWV8 329 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 MIS18AQ9NYP9 233 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 PDZRN3Q9UPQ7 1066 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 ITGB4P16144 1822 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 KCPQ6ZWJ8 1503 aa6.96□□□□□ -1.3
CRLF3-204ENST00000583527 AK9Q5TCS8 1911 aa6.95□□□□□ -1.3
CRLF3-204ENST00000583527 MYCNP04198 464 aaPredicted RBP6.95□□□□□ -1.3
CRLF3-204ENST00000583527 CHRNA2Q15822 529 aa6.95□□□□□ -1.3
CRLF3-204ENST00000583527 PLEKHO1Q53GL0 409 aaPredicted RBP6.95□□□□□ -1.3
CRLF3-204ENST00000583527 INTS3Q68E01 1043 aaKnown RBP6.95□□□□□ -1.3
CRLF3-204ENST00000583527 SMC5Q8IY18 1101 aa6.95□□□□□ -1.3
CRLF3-204ENST00000583527 STK31Q9BXU1 1019 aa6.95□□□□□ -1.3
CRLF3-204ENST00000583527 WDR17Q8IZU2 1322 aa6.95□□□□□ -1.3
CRLF3-204ENST00000583527 HOXB7P09629 217 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 TEFQ10587 303 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 HDGFL1Q5TGJ6 251 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 NPM2Q86SE8 214 aaKnown RBP6.94□□□□□ -1.3
CRLF3-204ENST00000583527 RAPGEF4Q8WZA2 1011 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 CHMP4BQ9H444 224 aaKnown RBP6.94□□□□□ -1.3
CRLF3-204ENST00000583527 PRDM11Q9NQV5 511 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 NLRP2Q9NX02 1062 aa6.94□□□□□ -1.3
CRLF3-204ENST00000583527 DISP2A7MBM2 1401 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
CRLF3-204ENST00000583527 RNMTO43148 476 aaKnown RBP6.93□□□□□ -1.3
CRLF3-204ENST00000583527 FLIIQ13045 1269 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
CRLF3-204ENST00000583527 CCDC30Q5VVM6 783 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 MPRIPQ6WCQ1 1025 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 G2E3Q7L622 706 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 MEIS3Q99687 375 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 SLAIN2Q9P270 581 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 CICQ96RK0 1608 aaPredicted RBP6.93□□□□□ -1.3
CRLF3-204ENST00000583527 HEG1Q9ULI3 1381 aa6.93□□□□□ -1.3
CRLF3-204ENST00000583527 ANKRD36CQ5JPF3 1778 aa6.92□□□□□ -1.3
CRLF3-204ENST00000583527 C19orf67A6NJJ6 358 aa6.92□□□□□ -1.3
CRLF3-204ENST00000583527 PHKG2P15735 406 aa6.92□□□□□ -1.3
CRLF3-204ENST00000583527 TATP17735 454 aaPredicted RBP6.92□□□□□ -1.3
CRLF3-204ENST00000583527 CCT4P50991 539 aaKnown RBP6.92□□□□□ -1.3
CRLF3-204ENST00000583527 EIF4A1P60842 406 aaKnown RBP6.92□□□□□ -1.3
CRLF3-204ENST00000583527 FKBP5Q13451 457 aaPredicted RBP6.92□□□□□ -1.3
CRLF3-204ENST00000583527 ZBTB12Q9Y330 459 aaPredicted RBP6.92□□□□□ -1.3
CRLF3-204ENST00000583527 PCDH11XQ9BZA7 1347 aa6.92□□□□□ -1.3
CRLF3-204ENST00000583527 PCDH11YQ9BZA8 1340 aa6.92□□□□□ -1.3
CRLF3-204ENST00000583527 ADCY9O60503 1353 aa6.92□□□□□ -1.3
CRLF3-204ENST00000583527 BTBD11A6QL63 1104 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms