RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 HOXC9P31274 260 aa23.59■■□□□ 1.37
SPECC1-221ENST00000583482 PIM2Q9P1W9 311 aa23.59■■□□□ 1.37
SPECC1-221ENST00000583482 LOC102724428A0A0B4J2F2 783 aa23.58■■□□□ 1.37
SPECC1-221ENST00000583482 RGS19P49795 217 aa23.58■■□□□ 1.37
SPECC1-221ENST00000583482 SIK1P57059 783 aa23.58■■□□□ 1.37
SPECC1-221ENST00000583482 ITPK1Q13572 414 aa23.58■■□□□ 1.37
SPECC1-221ENST00000583482 VIRMAQ69YN4 1812 aaKnown RBP23.58■■□□□ 1.37
SPECC1-221ENST00000583482 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.36
SPECC1-221ENST00000583482 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.36
SPECC1-221ENST00000583482 CNTNAP1P78357 1384 aa23.57■■□□□ 1.36
SPECC1-221ENST00000583482 GLTPD2A6NH11 291 aa23.57■■□□□ 1.36
SPECC1-221ENST00000583482 DALRD3Q5D0E6 543 aaKnown RBP23.57■■□□□ 1.36
SPECC1-221ENST00000583482 EDC4Q6P2E9 1401 aaKnown RBP23.57■■□□□ 1.36
SPECC1-221ENST00000583482 MAP3K19Q56UN5 1328 aa23.57■■□□□ 1.36
SPECC1-221ENST00000583482 NBPF6Q5VWK0 638 aa23.56■■□□□ 1.36
SPECC1-221ENST00000583482 NLGN1Q8N2Q7 840 aa23.56■■□□□ 1.36
SPECC1-221ENST00000583482 PIGBQ92521 554 aa23.56■■□□□ 1.36
SPECC1-221ENST00000583482 NBPF4Q96M43 638 aa23.56■■□□□ 1.36
SPECC1-221ENST00000583482 TMF1P82094 1093 aa23.55■■□□□ 1.36
SPECC1-221ENST00000583482 USHBP1Q8N6Y0 703 aa23.55■■□□□ 1.36
SPECC1-221ENST00000583482 CCDC88AQ3V6T2 1871 aa23.54■■□□□ 1.36
SPECC1-221ENST00000583482 POTECB2RU33 542 aa23.54■■□□□ 1.36
SPECC1-221ENST00000583482 CYP27B1O15528 508 aa23.54■■□□□ 1.36
SPECC1-221ENST00000583482 LBX1P52954 281 aa23.54■■□□□ 1.36
SPECC1-221ENST00000583482 RASSF7Q02833 373 aa23.54■■□□□ 1.36
SPECC1-221ENST00000583482 AIDAQ96BJ3 306 aa23.53■■□□□ 1.36
SPECC1-221ENST00000583482 RAPGEF4Q8WZA2 1011 aa23.52■■□□□ 1.36
SPECC1-221ENST00000583482 GYS1P13807 737 aa23.51■■□□□ 1.35
SPECC1-221ENST00000583482 WBP1LQ9NX94 342 aa23.5■■□□□ 1.35
SPECC1-221ENST00000583482 TATP17735 454 aaPredicted RBP23.49■■□□□ 1.35
SPECC1-221ENST00000583482 FBLN1P23142 703 aa23.49■■□□□ 1.35
SPECC1-221ENST00000583482 PARP3Q9Y6F1 533 aa23.49■■□□□ 1.35
SPECC1-221ENST00000583482 PDE4DIPQ5VU43 2346 aa23.49■■□□□ 1.35
SPECC1-221ENST00000583482 HSPA8P11142 646 aaKnown RBP23.48■■□□□ 1.35
SPECC1-221ENST00000583482 AMPHP49418 695 aa23.48■■□□□ 1.35
SPECC1-221ENST00000583482 TRAPPC3LQ5T215 181 aa23.48■■□□□ 1.35
SPECC1-221ENST00000583482 COL5A3P25940 1745 aaPredicted RBP23.47■■□□□ 1.35
SPECC1-221ENST00000583482 CHRNA5P30532 468 aa23.47■■□□□ 1.35
SPECC1-221ENST00000583482 ATP6V1AP38606 617 aa23.47■■□□□ 1.35
SPECC1-221ENST00000583482 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
SPECC1-221ENST00000583482 RTL1A6NKG5 1358 aa23.46■■□□□ 1.35
SPECC1-221ENST00000583482 LMNB1P20700 586 aa23.46■■□□□ 1.35
SPECC1-221ENST00000583482 ARHGEF1Q92888 912 aaKnown RBP23.46■■□□□ 1.35
SPECC1-221ENST00000583482 RTCBQ9Y3I0 505 aaKnown RBP23.46■■□□□ 1.35
SPECC1-221ENST00000583482 CCDC85CA6NKD9 419 aa23.45■■□□□ 1.34
SPECC1-221ENST00000583482 VEGFBP49765 207 aa23.45■■□□□ 1.34
SPECC1-221ENST00000583482 ASAP1Q9ULH1 1129 aa23.45■■□□□ 1.34
SPECC1-221ENST00000583482 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
SPECC1-221ENST00000583482 KDRP35968 1356 aa23.44■■□□□ 1.34
SPECC1-221ENST00000583482 CHADLQ6NUI6 762 aa23.44■■□□□ 1.34
SPECC1-221ENST00000583482 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
SPECC1-221ENST00000583482 MYH14Q7Z406 1995 aaKnown RBP23.43■■□□□ 1.34
SPECC1-221ENST00000583482 ADRA2BP18089 450 aa23.42■■□□□ 1.34
SPECC1-221ENST00000583482 NKX1-1Q15270 411 aaPredicted RBP23.42■■□□□ 1.34
SPECC1-221ENST00000583482 SLC12A5Q9H2X9 1139 aa23.42■■□□□ 1.34
SPECC1-221ENST00000583482 DLEC1Q9Y238 1755 aa23.42■■□□□ 1.34
SPECC1-221ENST00000583482 PASKQ96RG2 1323 aa23.41■■□□□ 1.34
SPECC1-221ENST00000583482 POTEIP0CG38 1075 aa23.41■■□□□ 1.34
SPECC1-221ENST00000583482 POTEJP0CG39 1038 aa23.41■■□□□ 1.34
SPECC1-221ENST00000583482 DDR1Q08345 913 aa23.41■■□□□ 1.34
SPECC1-221ENST00000583482 TMC1Q8TDI8 760 aa23.4■■□□□ 1.34
SPECC1-221ENST00000583482 DICER1Q9UPY3 1922 aaKnown RBP23.39■■□□□ 1.34
SPECC1-221ENST00000583482 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
SPECC1-221ENST00000583482 SLC4A9Q96Q91 983 aa23.38■■□□□ 1.33
SPECC1-221ENST00000583482 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
SPECC1-221ENST00000583482 RFC4P35249 363 aa23.37■■□□□ 1.33
SPECC1-221ENST00000583482 COG3Q96JB2 828 aa23.36■■□□□ 1.33
SPECC1-221ENST00000583482 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
SPECC1-221ENST00000583482 CNTNAP4Q9C0A0 1308 aa23.35■■□□□ 1.33
SPECC1-221ENST00000583482 NFKBIEO00221 500 aa23.35■■□□□ 1.33
SPECC1-221ENST00000583482 RRS1Q15050 365 aaKnown RBP23.35■■□□□ 1.33
SPECC1-221ENST00000583482 RC3H1Q5TC82 1133 aaKnown RBP23.35■■□□□ 1.33
SPECC1-221ENST00000583482 RPS6KA4O75676 772 aa23.34■■□□□ 1.33
SPECC1-221ENST00000583482 TERF2IPQ9NYB0 399 aa23.34■■□□□ 1.33
SPECC1-221ENST00000583482 FKBP8Q14318 412 aa23.33■■□□□ 1.33
SPECC1-221ENST00000583482 AFDNP55196 1824 aaKnown RBP23.33■■□□□ 1.32
SPECC1-221ENST00000583482 THSD7BQ9C0I4 1608 aa23.33■■□□□ 1.32
SPECC1-221ENST00000583482 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
SPECC1-221ENST00000583482 ROCK2O75116 1388 aaKnown RBP23.31■■□□□ 1.32
SPECC1-221ENST00000583482 TMEM88BA6NKF7 163 aa23.31■■□□□ 1.32
SPECC1-221ENST00000583482 DPY19L2Q6NUT2 758 aa23.31■■□□□ 1.32
SPECC1-221ENST00000583482 SRP68Q9UHB9 627 aaKnown RBP23.31■■□□□ 1.32
SPECC1-221ENST00000583482 ADAMTS7Q9UKP4 1686 aa23.31■■□□□ 1.32
SPECC1-221ENST00000583482 INSRP06213 1382 aa23.3■■□□□ 1.32
SPECC1-221ENST00000583482 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
SPECC1-221ENST00000583482 HSP90AB2PQ58FF8 381 aa23.29■■□□□ 1.32
SPECC1-221ENST00000583482 NRXN2Q9P2S2 1712 aa23.29■■□□□ 1.32
SPECC1-221ENST00000583482 USP42Q9H9J4 1324 aaKnown RBP23.29■■□□□ 1.32
SPECC1-221ENST00000583482 FER1L6Q2WGJ9 1857 aa23.28■■□□□ 1.32
SPECC1-221ENST00000583482 RASSF10A6NK89 507 aa23.27■■□□□ 1.32
SPECC1-221ENST00000583482 ITGBL1O95965 494 aaPredicted RBP23.26■■□□□ 1.31
SPECC1-221ENST00000583482 MAP2K1Q02750 393 aaPredicted RBP23.26■■□□□ 1.31
SPECC1-221ENST00000583482 SCN4AP35499 1836 aa23.25■■□□□ 1.31
SPECC1-221ENST00000583482 TM4SF1P30408 202 aa23.25■■□□□ 1.31
SPECC1-221ENST00000583482 LDHDQ86WU2 507 aa23.25■■□□□ 1.31
SPECC1-221ENST00000583482 ADAMTSL1Q8N6G6 1762 aa23.24■■□□□ 1.31
SPECC1-221ENST00000583482 WDR33Q9C0J8 1336 aaKnown RBP23.24■■□□□ 1.31
SPECC1-221ENST00000583482 TTLL6Q8N841 843 aa23.23■■□□□ 1.31
SPECC1-221ENST00000583482 SPG7Q9UQ90 795 aa23.23■■□□□ 1.31
SPECC1-221ENST00000583482 LTBP1Q14766 1721 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms