RNA–Protein interactions for RNA: ENST00000583394.2

AL353997.6-201, humanhuman

TSL 1 (best) BASIC

Gene AL353997.6, Length 621 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353997.6-201ENST00000583394 AK7Q96M32 723 aa17.65■□□□□ 0.42
AL353997.6-201ENST00000583394 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
AL353997.6-201ENST00000583394 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
AL353997.6-201ENST00000583394 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
AL353997.6-201ENST00000583394 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
AL353997.6-201ENST00000583394 PHKG2P15735 406 aa17.62■□□□□ 0.41
AL353997.6-201ENST00000583394 IL13P35225 146 aa17.62■□□□□ 0.41
AL353997.6-201ENST00000583394 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
AL353997.6-201ENST00000583394 KDRP35968 1356 aa17.62■□□□□ 0.41
AL353997.6-201ENST00000583394 MTHFSP49914 203 aa17.61■□□□□ 0.41
AL353997.6-201ENST00000583394 AMIGO3Q86WK7 504 aa17.61■□□□□ 0.41
AL353997.6-201ENST00000583394 PCNTO95613 3336 aa17.6■□□□□ 0.41
AL353997.6-201ENST00000583394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
AL353997.6-201ENST00000583394 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
AL353997.6-201ENST00000583394 KIAA1551Q9HCM1 1747 aa17.6■□□□□ 0.41
AL353997.6-201ENST00000583394 BRCA1P38398 1863 aaKnown RBP17.59■□□□□ 0.41
AL353997.6-201ENST00000583394 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
AL353997.6-201ENST00000583394 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
AL353997.6-201ENST00000583394 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
AL353997.6-201ENST00000583394 SMARCC1Q92922 1105 aaPredicted RBP17.59■□□□□ 0.41
AL353997.6-201ENST00000583394 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.4
AL353997.6-201ENST00000583394 PIGBQ92521 554 aa17.58■□□□□ 0.4
AL353997.6-201ENST00000583394 WDR90Q96KV7 1748 aa17.58■□□□□ 0.4
AL353997.6-201ENST00000583394 KIF3CO14782 793 aa17.57■□□□□ 0.4
AL353997.6-201ENST00000583394 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
AL353997.6-201ENST00000583394 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
AL353997.6-201ENST00000583394 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
AL353997.6-201ENST00000583394 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
AL353997.6-201ENST00000583394 ARFGEF1Q9Y6D6 1849 aa17.56■□□□□ 0.4
AL353997.6-201ENST00000583394 SSFA2P28290 1259 aa17.55■□□□□ 0.4
AL353997.6-201ENST00000583394 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
AL353997.6-201ENST00000583394 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
AL353997.6-201ENST00000583394 GNPATO15228 680 aa17.54■□□□□ 0.4
AL353997.6-201ENST00000583394 DIAPH1O60610 1272 aaKnown RBP17.54■□□□□ 0.4
AL353997.6-201ENST00000583394 APLP1P51693 650 aa17.54■□□□□ 0.4
AL353997.6-201ENST00000583394 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
AL353997.6-201ENST00000583394 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
AL353997.6-201ENST00000583394 LOC102724428A0A0B4J2F2 783 aa17.53■□□□□ 0.4
AL353997.6-201ENST00000583394 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
AL353997.6-201ENST00000583394 SIK1P57059 783 aa17.53■□□□□ 0.4
AL353997.6-201ENST00000583394 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
AL353997.6-201ENST00000583394 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.4
AL353997.6-201ENST00000583394 PXDNLA1KZ92 1463 aa17.52■□□□□ 0.4
AL353997.6-201ENST00000583394 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
AL353997.6-201ENST00000583394 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
AL353997.6-201ENST00000583394 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.39
AL353997.6-201ENST00000583394 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
AL353997.6-201ENST00000583394 SBF1O95248 1867 aa17.51■□□□□ 0.39
AL353997.6-201ENST00000583394 MMP10P09238 476 aa17.51■□□□□ 0.39
AL353997.6-201ENST00000583394 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
AL353997.6-201ENST00000583394 BCS1LQ9Y276 419 aa17.51■□□□□ 0.39
AL353997.6-201ENST00000583394 HMOX1P09601 288 aa17.5■□□□□ 0.39
AL353997.6-201ENST00000583394 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
AL353997.6-201ENST00000583394 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
AL353997.6-201ENST00000583394 TOMM70O94826 608 aa17.49■□□□□ 0.39
AL353997.6-201ENST00000583394 ITPK1Q13572 414 aa17.49■□□□□ 0.39
AL353997.6-201ENST00000583394 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
AL353997.6-201ENST00000583394 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
AL353997.6-201ENST00000583394 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
AL353997.6-201ENST00000583394 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 CABP4P57796 275 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 NMRK2Q9NPI5 230 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 CCDC88AQ3V6T2 1871 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
AL353997.6-201ENST00000583394 MRC1P22897 1456 aa17.46■□□□□ 0.39
AL353997.6-201ENST00000583394 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
AL353997.6-201ENST00000583394 PPP2R1AP30153 589 aa17.45■□□□□ 0.38
AL353997.6-201ENST00000583394 DNAJC5GQ8N7S2 189 aa17.45■□□□□ 0.38
AL353997.6-201ENST00000583394 TNRC6CQ9HCJ0 1690 aaKnown RBP17.45■□□□□ 0.38
AL353997.6-201ENST00000583394 FCHSD2O94868 740 aa17.44■□□□□ 0.38
AL353997.6-201ENST00000583394 TGFB2P61812 414 aa17.44■□□□□ 0.38
AL353997.6-201ENST00000583394 TRAPPC3LQ5T215 181 aa17.44■□□□□ 0.38
AL353997.6-201ENST00000583394 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
AL353997.6-201ENST00000583394 DPEP1P16444 411 aa17.43■□□□□ 0.38
AL353997.6-201ENST00000583394 MTHFSDQ2M296 383 aaKnown RBP17.43■□□□□ 0.38
AL353997.6-201ENST00000583394 NLGN1Q8N2Q7 840 aa17.43■□□□□ 0.38
AL353997.6-201ENST00000583394 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
AL353997.6-201ENST00000583394 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
AL353997.6-201ENST00000583394 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
AL353997.6-201ENST00000583394 CCDC87Q9NVE4 849 aa17.42■□□□□ 0.38
AL353997.6-201ENST00000583394 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
AL353997.6-201ENST00000583394 HTRA3P83110 453 aa17.41■□□□□ 0.38
AL353997.6-201ENST00000583394 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
AL353997.6-201ENST00000583394 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
AL353997.6-201ENST00000583394 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
AL353997.6-201ENST00000583394 TJP1Q07157 1748 aa17.41■□□□□ 0.38
AL353997.6-201ENST00000583394 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
AL353997.6-201ENST00000583394 RBM46Q8TBY0 533 aaKnown RBP17.4■□□□□ 0.38
AL353997.6-201ENST00000583394 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
AL353997.6-201ENST00000583394 PARP3Q9Y6F1 533 aa17.4■□□□□ 0.38
AL353997.6-201ENST00000583394 KCPQ6ZWJ8 1503 aa17.4■□□□□ 0.38
AL353997.6-201ENST00000583394 CAPN15O75808 1086 aa17.39■□□□□ 0.37
AL353997.6-201ENST00000583394 RFC4P35249 363 aa17.39■□□□□ 0.37
AL353997.6-201ENST00000583394 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
AL353997.6-201ENST00000583394 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
AL353997.6-201ENST00000583394 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
AL353997.6-201ENST00000583394 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
AL353997.6-201ENST00000583394 GYS1P13807 737 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms