RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
ERBB2-215ENST00000583391 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
ERBB2-215ENST00000583391 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
ERBB2-215ENST00000583391 UPF1Q92900 1129 aaKnown RBP eCLIP17.14■□□□□ 0.33
ERBB2-215ENST00000583391 SLC52A2Q9HAB3 445 aa17.14■□□□□ 0.33
ERBB2-215ENST00000583391 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
ERBB2-215ENST00000583391 TEFQ10587 303 aa17.13■□□□□ 0.33
ERBB2-215ENST00000583391 PIGBQ92521 554 aa17.13■□□□□ 0.33
ERBB2-215ENST00000583391 C5P01031 1676 aa17.13■□□□□ 0.33
ERBB2-215ENST00000583391 APBA3O96018 575 aa17.12■□□□□ 0.33
ERBB2-215ENST00000583391 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
ERBB2-215ENST00000583391 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
ERBB2-215ENST00000583391 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
ERBB2-215ENST00000583391 TJP1Q07157 1748 aa17.12■□□□□ 0.33
ERBB2-215ENST00000583391 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
ERBB2-215ENST00000583391 COL5A3P25940 1745 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-215ENST00000583391 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
ERBB2-215ENST00000583391 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
ERBB2-215ENST00000583391 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
ERBB2-215ENST00000583391 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-215ENST00000583391 BAG6P46379 1132 aa17.09■□□□□ 0.33
ERBB2-215ENST00000583391 DEFB132Q7Z7B7 95 aa17.09■□□□□ 0.33
ERBB2-215ENST00000583391 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
ERBB2-215ENST00000583391 TUBGCP6Q96RT7 1819 aa17.08■□□□□ 0.33
ERBB2-215ENST00000583391 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
ERBB2-215ENST00000583391 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-215ENST00000583391 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
ERBB2-215ENST00000583391 ATG3Q9NT62 314 aa17.07■□□□□ 0.32
ERBB2-215ENST00000583391 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
ERBB2-215ENST00000583391 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
ERBB2-215ENST00000583391 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
ERBB2-215ENST00000583391 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
ERBB2-215ENST00000583391 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
ERBB2-215ENST00000583391 SOCS7O14512 581 aa17.04■□□□□ 0.32
ERBB2-215ENST00000583391 PLSCR1O15162 318 aa17.04■□□□□ 0.32
ERBB2-215ENST00000583391 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
ERBB2-215ENST00000583391 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
ERBB2-215ENST00000583391 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
ERBB2-215ENST00000583391 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
ERBB2-215ENST00000583391 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
ERBB2-215ENST00000583391 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
ERBB2-215ENST00000583391 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
ERBB2-215ENST00000583391 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
ERBB2-215ENST00000583391 NGEFQ8N5V2 710 aa17.03■□□□□ 0.32
ERBB2-215ENST00000583391 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
ERBB2-215ENST00000583391 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
ERBB2-215ENST00000583391 KCNQ3O43525 872 aa17.02■□□□□ 0.32
ERBB2-215ENST00000583391 PTCD1O75127 700 aaKnown RBP17.02■□□□□ 0.32
ERBB2-215ENST00000583391 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
ERBB2-215ENST00000583391 TXNRD1Q16881 649 aa17.02■□□□□ 0.32
ERBB2-215ENST00000583391 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
ERBB2-215ENST00000583391 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
ERBB2-215ENST00000583391 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
ERBB2-215ENST00000583391 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
ERBB2-215ENST00000583391 KCNQ4P56696 695 aa17.01■□□□□ 0.31
ERBB2-215ENST00000583391 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
ERBB2-215ENST00000583391 ZNF521Q96K83 1311 aa17■□□□□ 0.31
ERBB2-215ENST00000583391 LOC102724428A0A0B4J2F2 783 aa17■□□□□ 0.31
ERBB2-215ENST00000583391 SIK1P57059 783 aa17■□□□□ 0.31
ERBB2-215ENST00000583391 IFT57Q9NWB7 429 aa17■□□□□ 0.31
ERBB2-215ENST00000583391 GNAI1P63096 354 aa16.99■□□□□ 0.31
ERBB2-215ENST00000583391 PROM2Q8N271 834 aa16.99■□□□□ 0.31
ERBB2-215ENST00000583391 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-215ENST00000583391 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
ERBB2-215ENST00000583391 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
ERBB2-215ENST00000583391 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
ERBB2-215ENST00000583391 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
ERBB2-215ENST00000583391 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
ERBB2-215ENST00000583391 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
ERBB2-215ENST00000583391 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
ERBB2-215ENST00000583391 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
ERBB2-215ENST00000583391 IL16Q14005 1332 aa16.97■□□□□ 0.31
ERBB2-215ENST00000583391 CHL1O00533 1208 aa16.97■□□□□ 0.31
ERBB2-215ENST00000583391 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
ERBB2-215ENST00000583391 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
ERBB2-215ENST00000583391 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
ERBB2-215ENST00000583391 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
ERBB2-215ENST00000583391 C4AP0C0L4 1744 aa16.96■□□□□ 0.31
ERBB2-215ENST00000583391 ITPK1Q13572 414 aa16.96■□□□□ 0.31
ERBB2-215ENST00000583391 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
ERBB2-215ENST00000583391 LINC00116Q8NCU8 138 aa16.95■□□□□ 0.3
ERBB2-215ENST00000583391 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
ERBB2-215ENST00000583391 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
ERBB2-215ENST00000583391 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
ERBB2-215ENST00000583391 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
ERBB2-215ENST00000583391 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
ERBB2-215ENST00000583391 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
ERBB2-215ENST00000583391 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
ERBB2-215ENST00000583391 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
ERBB2-215ENST00000583391 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
ERBB2-215ENST00000583391 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
ERBB2-215ENST00000583391 ANO8Q9HCE9 1232 aaPredicted RBP16.93■□□□□ 0.3
ERBB2-215ENST00000583391 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
ERBB2-215ENST00000583391 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
ERBB2-215ENST00000583391 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
ERBB2-215ENST00000583391 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
ERBB2-215ENST00000583391 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
ERBB2-215ENST00000583391 E9PSI1 815 aa16.9■□□□□ 0.3
ERBB2-215ENST00000583391 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-215ENST00000583391 AK7Q96M32 723 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms