RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
ITGB4-209ENST00000583327 BRWD3Q6RI45 1802 aa17.8■□□□□ 0.44
ITGB4-209ENST00000583327 A0A0G2JS52 829 aa17.8■□□□□ 0.44
ITGB4-209ENST00000583327 CABP4P57796 275 aa17.8■□□□□ 0.44
ITGB4-209ENST00000583327 MYT1Q01538 1121 aa17.8■□□□□ 0.44
ITGB4-209ENST00000583327 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
ITGB4-209ENST00000583327 PRIM1P49642 420 aaKnown RBP17.79■□□□□ 0.44
ITGB4-209ENST00000583327 PIGBQ92521 554 aa17.79■□□□□ 0.44
ITGB4-209ENST00000583327 MYH16Q9H6N6 1097 aa17.79■□□□□ 0.44
ITGB4-209ENST00000583327 MIS18AQ9NYP9 233 aa17.79■□□□□ 0.44
ITGB4-209ENST00000583327 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
ITGB4-209ENST00000583327 HEG1Q9ULI3 1381 aa17.78■□□□□ 0.44
ITGB4-209ENST00000583327 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
ITGB4-209ENST00000583327 FAM182BQ5T319 152 aa17.77■□□□□ 0.44
ITGB4-209ENST00000583327 FAM196AQ6ZSG2 479 aa17.77■□□□□ 0.44
ITGB4-209ENST00000583327 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
ITGB4-209ENST00000583327 KCNQ2O43526 872 aa17.76■□□□□ 0.43
ITGB4-209ENST00000583327 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
ITGB4-209ENST00000583327 TSPYL4Q9UJ04 414 aa17.76■□□□□ 0.43
ITGB4-209ENST00000583327 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
ITGB4-209ENST00000583327 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
ITGB4-209ENST00000583327 ITGB4P16144 1822 aa17.75■□□□□ 0.43
ITGB4-209ENST00000583327 KCNQ3O43525 872 aa17.75■□□□□ 0.43
ITGB4-209ENST00000583327 EIF4A1P60842 406 aaKnown RBP17.75■□□□□ 0.43
ITGB4-209ENST00000583327 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
ITGB4-209ENST00000583327 DOT1LQ8TEK3 1739 aa17.75■□□□□ 0.43
ITGB4-209ENST00000583327 ACSBG1Q96GR2 724 aa17.74■□□□□ 0.43
ITGB4-209ENST00000583327 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
ITGB4-209ENST00000583327 PAPPAQ13219 1627 aa17.73■□□□□ 0.43
ITGB4-209ENST00000583327 EXOSC9Q06265 439 aaKnown RBP17.73■□□□□ 0.43
ITGB4-209ENST00000583327 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
ITGB4-209ENST00000583327 PTF1AQ7RTS3 328 aa17.73■□□□□ 0.43
ITGB4-209ENST00000583327 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
ITGB4-209ENST00000583327 NHSQ6T4R5 1651 aa17.72■□□□□ 0.43
ITGB4-209ENST00000583327 BCL11BQ9C0K0 894 aaPredicted RBP17.72■□□□□ 0.43
ITGB4-209ENST00000583327 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
ITGB4-209ENST00000583327 SBF2Q86WG5 1849 aa17.72■□□□□ 0.43
ITGB4-209ENST00000583327 VAMP4O75379 141 aa17.71■□□□□ 0.43
ITGB4-209ENST00000583327 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
ITGB4-209ENST00000583327 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
ITGB4-209ENST00000583327 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
ITGB4-209ENST00000583327 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
ITGB4-209ENST00000583327 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
ITGB4-209ENST00000583327 UBR2Q8IWV8 1755 aa17.69■□□□□ 0.42
ITGB4-209ENST00000583327 GIGYF1O75420 1035 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-209ENST00000583327 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
ITGB4-209ENST00000583327 SYTL4Q96C24 671 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-209ENST00000583327 HOXB7P09629 217 aa17.68■□□□□ 0.42
ITGB4-209ENST00000583327 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
ITGB4-209ENST00000583327 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
ITGB4-209ENST00000583327 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
ITGB4-209ENST00000583327 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
ITGB4-209ENST00000583327 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
ITGB4-209ENST00000583327 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
ITGB4-209ENST00000583327 SLC4A9Q96Q91 983 aa17.67■□□□□ 0.42
ITGB4-209ENST00000583327 TRIM37O94972 964 aa17.65■□□□□ 0.42
ITGB4-209ENST00000583327 SNRPA1P09661 255 aaKnown RBP17.64■□□□□ 0.41
ITGB4-209ENST00000583327 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.41
ITGB4-209ENST00000583327 BTAF1O14981 1849 aa17.63■□□□□ 0.41
ITGB4-209ENST00000583327 EP400Q96L91 3159 aa17.63■□□□□ 0.41
ITGB4-209ENST00000583327 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
ITGB4-209ENST00000583327 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
ITGB4-209ENST00000583327 PLSCR1O15162 318 aa17.63■□□□□ 0.41
ITGB4-209ENST00000583327 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
ITGB4-209ENST00000583327 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
ITGB4-209ENST00000583327 BRPF1P55201 1214 aaPredicted RBP17.63■□□□□ 0.41
ITGB4-209ENST00000583327 PALLDQ8WX93 1383 aa17.63■□□□□ 0.41
ITGB4-209ENST00000583327 CICQ96RK0 1608 aaPredicted RBP17.62■□□□□ 0.41
ITGB4-209ENST00000583327 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
ITGB4-209ENST00000583327 ALDH1L2Q3SY69 923 aa17.62■□□□□ 0.41
ITGB4-209ENST00000583327 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
ITGB4-209ENST00000583327 USP16Q9Y5T5 823 aa17.62■□□□□ 0.41
ITGB4-209ENST00000583327 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
ITGB4-209ENST00000583327 SIK1P57059 783 aa17.61■□□□□ 0.41
ITGB4-209ENST00000583327 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
ITGB4-209ENST00000583327 RCAN3Q9UKA8 241 aa17.61■□□□□ 0.41
ITGB4-209ENST00000583327 LY75O60449 1722 aa17.59■□□□□ 0.41
ITGB4-209ENST00000583327 PROM2Q8N271 834 aa17.59■□□□□ 0.41
ITGB4-209ENST00000583327 SSH1Q8WYL5 1049 aa17.59■□□□□ 0.41
ITGB4-209ENST00000583327 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
ITGB4-209ENST00000583327 C5P01031 1676 aa17.58■□□□□ 0.41
ITGB4-209ENST00000583327 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
ITGB4-209ENST00000583327 CYP19A1P11511 503 aaPredicted RBP17.58■□□□□ 0.4
ITGB4-209ENST00000583327 ITPK1Q13572 414 aa17.58■□□□□ 0.4
ITGB4-209ENST00000583327 PDIA6Q15084 440 aa17.58■□□□□ 0.4
ITGB4-209ENST00000583327 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
ITGB4-209ENST00000583327 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
ITGB4-209ENST00000583327 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
ITGB4-209ENST00000583327 LRP10Q7Z4F1 713 aa17.57■□□□□ 0.4
ITGB4-209ENST00000583327 MRPL50Q8N5N7 158 aaKnown RBP17.57■□□□□ 0.4
ITGB4-209ENST00000583327 TJP1Q07157 1748 aa17.57■□□□□ 0.4
ITGB4-209ENST00000583327 TNS1Q9HBL0 1735 aaKnown RBP17.57■□□□□ 0.4
ITGB4-209ENST00000583327 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
ITGB4-209ENST00000583327 BCAR3O75815 825 aa17.56■□□□□ 0.4
ITGB4-209ENST00000583327 APBA3O96018 575 aa17.56■□□□□ 0.4
ITGB4-209ENST00000583327 ATP6V1AP38606 617 aa17.56■□□□□ 0.4
ITGB4-209ENST00000583327 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
ITGB4-209ENST00000583327 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
ITGB4-209ENST00000583327 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
ITGB4-209ENST00000583327 DDX21Q9NR30 783 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms