RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 LOC102724428A0A0B4J2F2 783 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 CYP27B1O15528 508 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 SIK1P57059 783 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 ITPK1Q13572 414 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 PIGBQ92521 554 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 CCDC87Q9NVE4 849 aa10.05□□□□□ -0.8
CTC1-211ENST00000583254 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
CTC1-211ENST00000583254 KCNA3P22001 575 aa10.04□□□□□ -0.8
CTC1-211ENST00000583254 DCAF5Q96JK2 942 aa10.04□□□□□ -0.8
CTC1-211ENST00000583254 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
CTC1-211ENST00000583254 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
CTC1-211ENST00000583254 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
CTC1-211ENST00000583254 COG3Q96JB2 828 aa10.03□□□□□ -0.8
CTC1-211ENST00000583254 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
CTC1-211ENST00000583254 FOXN1O15353 648 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 TMF1P82094 1093 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 RASSF7Q02833 373 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 L3MBTL2Q969R5 705 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 PIM2Q9P1W9 311 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
CTC1-211ENST00000583254 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.81
CTC1-211ENST00000583254 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
CTC1-211ENST00000583254 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
CTC1-211ENST00000583254 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
CTC1-211ENST00000583254 ASAP1Q9ULH1 1129 aa10.01□□□□□ -0.81
CTC1-211ENST00000583254 PARP3Q9Y6F1 533 aa10.01□□□□□ -0.81
CTC1-211ENST00000583254 GYS1P13807 737 aa10□□□□□ -0.81
CTC1-211ENST00000583254 VEGFAP15692 232 aaPredicted RBP10□□□□□ -0.81
CTC1-211ENST00000583254 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
CTC1-211ENST00000583254 RTCBQ9Y3I0 505 aaKnown RBP10□□□□□ -0.81
CTC1-211ENST00000583254 KDRP35968 1356 aa10□□□□□ -0.81
CTC1-211ENST00000583254 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
CTC1-211ENST00000583254 GLTPD2A6NH11 291 aa9.99□□□□□ -0.81
CTC1-211ENST00000583254 CHRNA5P30532 468 aa9.99□□□□□ -0.81
CTC1-211ENST00000583254 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
CTC1-211ENST00000583254 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
CTC1-211ENST00000583254 TMOD3Q9NYL9 352 aa9.99□□□□□ -0.81
CTC1-211ENST00000583254 CCDC88AQ3V6T2 1871 aa9.99□□□□□ -0.81
CTC1-211ENST00000583254 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
CTC1-211ENST00000583254 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
CTC1-211ENST00000583254 ZNF831Q5JPB2 1677 aa9.98□□□□□ -0.81
CTC1-211ENST00000583254 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
CTC1-211ENST00000583254 ADRA2BP18089 450 aa9.97□□□□□ -0.81
CTC1-211ENST00000583254 RFC4P35249 363 aa9.97□□□□□ -0.81
CTC1-211ENST00000583254 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
CTC1-211ENST00000583254 CREBZFQ9NS37 354 aa9.97□□□□□ -0.81
CTC1-211ENST00000583254 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
CTC1-211ENST00000583254 INSRP06213 1382 aa9.97□□□□□ -0.81
CTC1-211ENST00000583254 LMNB1P20700 586 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 CTCFP49711 727 aaPredicted RBP9.96□□□□□ -0.82
CTC1-211ENST00000583254 DDR1Q08345 913 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 AIDAQ96BJ3 306 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 ABHD8Q96I13 439 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 SLC4A9Q96Q91 983 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 FLT4P35916 1363 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 CNTNAP1P78357 1384 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 DLEC1Q9Y238 1755 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 KIF20BQ96Q89 1820 aa9.96□□□□□ -0.82
CTC1-211ENST00000583254 POTECB2RU33 542 aa9.95□□□□□ -0.82
CTC1-211ENST00000583254 LBX1P52954 281 aa9.95□□□□□ -0.82
CTC1-211ENST00000583254 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
CTC1-211ENST00000583254 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
CTC1-211ENST00000583254 SRP68Q9UHB9 627 aaKnown RBP9.95□□□□□ -0.82
CTC1-211ENST00000583254 CNTNAP4Q9C0A0 1308 aa9.95□□□□□ -0.82
CTC1-211ENST00000583254 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
CTC1-211ENST00000583254 VIRMAQ69YN4 1812 aaKnown RBP9.95□□□□□ -0.82
CTC1-211ENST00000583254 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
CTC1-211ENST00000583254 FKBP8Q14318 412 aa9.94□□□□□ -0.82
CTC1-211ENST00000583254 RC3H1Q5TC82 1133 aaKnown RBP9.94□□□□□ -0.82
CTC1-211ENST00000583254 SPG7Q9UQ90 795 aa9.94□□□□□ -0.82
CTC1-211ENST00000583254 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
CTC1-211ENST00000583254 USP42Q9H9J4 1324 aaKnown RBP9.93□□□□□ -0.82
CTC1-211ENST00000583254 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
CTC1-211ENST00000583254 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
CTC1-211ENST00000583254 MLLT1Q03111 559 aaPredicted RBP9.93□□□□□ -0.82
CTC1-211ENST00000583254 CHADLQ6NUI6 762 aa9.93□□□□□ -0.82
CTC1-211ENST00000583254 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
CTC1-211ENST00000583254 DICER1Q9UPY3 1922 aaKnown RBP9.92□□□□□ -0.82
CTC1-211ENST00000583254 POLRMTO00411 1230 aaKnown RBP9.92□□□□□ -0.82
CTC1-211ENST00000583254 PHKG2P15735 406 aa9.92□□□□□ -0.82
CTC1-211ENST00000583254 CARD11Q9BXL7 1154 aa9.92□□□□□ -0.82
CTC1-211ENST00000583254 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
CTC1-211ENST00000583254 KIF24Q5T7B8 1368 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 TJP1Q07157 1748 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 ANKRD26Q9UPS8 1709 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 NFKBIEO00221 500 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 FYB1O15117 783 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 HSPA8P11142 646 aaKnown RBP9.91□□□□□ -0.82
CTC1-211ENST00000583254 VEGFBP49765 207 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 PUS7Q96PZ0 661 aaKnown RBP9.91□□□□□ -0.82
CTC1-211ENST00000583254 SIN3AQ96ST3 1273 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
CTC1-211ENST00000583254 NRXN2Q9P2S2 1712 aa9.9□□□□□ -0.82
CTC1-211ENST00000583254 CCDC85CA6NKD9 419 aa9.9□□□□□ -0.82
CTC1-211ENST00000583254 TONSLQ96HA7 1378 aa9.89□□□□□ -0.83
CTC1-211ENST00000583254 PASKQ96RG2 1323 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms