RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 BTBD11A6QL63 1104 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 NEK4P51957 841 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 SLC26A8Q96RN1 970 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 PTCH1Q13635 1447 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 NUTM2FA1L443 756 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 ADGRB1O14514 1584 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 KIDINS220Q9ULH0 1771 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 H3BQV1 296 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 ZNF853P0CG23 659 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 IFFO2Q5TF58 517 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 TPM2P07951 284 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 IP6K1Q92551 441 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 NLRP2Q9NX02 1062 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 ALKQ9UM73 1620 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 GNL2Q13823 731 aaKnown RBP7.01□□□□□ -1.29
RTTN-209ENST00000583043 KLHL40Q2TBA0 621 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 SYNE3Q6ZMZ3 975 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
RTTN-209ENST00000583043 TRDNQ13061 729 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 CADPS2Q86UW7 1296 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 EVI5LQ96CN4 794 aa7.01□□□□□ -1.29
RTTN-209ENST00000583043 HSP90AB3PQ58FF7 597 aa7□□□□□ -1.29
RTTN-209ENST00000583043 ZNF396Q96N95 335 aaPredicted RBP7□□□□□ -1.29
RTTN-209ENST00000583043 BCL11BQ9C0K0 894 aaPredicted RBP7□□□□□ -1.29
RTTN-209ENST00000583043 QRICH2Q9H0J4 1663 aa7□□□□□ -1.29
RTTN-209ENST00000583043 UVSSAQ2YD98 709 aa7□□□□□ -1.29
RTTN-209ENST00000583043 TBC1D9Q6ZT07 1266 aa7□□□□□ -1.29
RTTN-209ENST00000583043 HMGN5P82970 282 aaKnown RBP7□□□□□ -1.29
RTTN-209ENST00000583043 NAT10Q9H0A0 1025 aaKnown RBP7□□□□□ -1.29
RTTN-209ENST00000583043 GZF1Q9H116 711 aaPredicted RBP7□□□□□ -1.29
RTTN-209ENST00000583043 SRGAP3O43295 1099 aa7□□□□□ -1.29
RTTN-209ENST00000583043 MEX3CQ5U5Q3 659 aaKnown RBP7□□□□□ -1.29
RTTN-209ENST00000583043 ARXQ96QS3 562 aa7□□□□□ -1.29
RTTN-209ENST00000583043 FSD1Q9BTV5 496 aa7□□□□□ -1.29
RTTN-209ENST00000583043 DDX24Q9GZR7 859 aaKnown RBP eCLIP7□□□□□ -1.29
RTTN-209ENST00000583043 AKAP2Q9Y2D5 859 aa7□□□□□ -1.29
RTTN-209ENST00000583043 GRPEL1Q9HAV7 217 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 ECHDC1Q9NTX5 307 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 USP6P35125 1406 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 ERBB4Q15303 1308 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 IFNL2Q8IZJ0 200 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 TSPY26PQ9H489 355 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 SPINK5Q9NQ38 1064 aaPredicted RBP6.99□□□□□ -1.29
RTTN-209ENST00000583043 NCAPD2Q15021 1401 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 NOL10Q9BSC4 688 aaKnown RBP6.99□□□□□ -1.29
RTTN-209ENST00000583043 EVA1CP58658 441 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 CEP85Q6P2H3 762 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 MCM10Q7L590 875 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 IQSEC2Q5JU85 1478 aa6.99□□□□□ -1.29
RTTN-209ENST00000583043 SPATA31D1Q6ZQQ2 1576 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 NPHP3Q7Z494 1330 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 CCP110O43303 1012 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 RLBP1P12271 317 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 KRT85P78386 507 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 CCDC73Q6ZRK6 1079 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 JMYQ8N9B5 988 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 SCAND2PQ9GZW5 306 aaPredicted RBP6.98□□□□□ -1.29
RTTN-209ENST00000583043 PTPRUQ92729 1446 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 TULP4Q9NRJ4 1543 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 GOLGA6L19H0YKK7 550 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 KCNA6P17658 529 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 CCDC158Q5M9N0 1113 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 MCTP1Q6DN14 999 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 KIF6Q6ZMV9 814 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.291e-6■■■■□ 21.1
RTTN-209ENST00000583043 CFAP45Q9UL16 551 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 U3KPZ7 1027 aaPredicted RBP6.98□□□□□ -1.29
RTTN-209ENST00000583043 PLEKHG2Q9H7P9 1386 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 PDE1AP54750 535 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 DRC7Q8IY82 874 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 LINS1Q8NG48 757 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 MAP3K19Q56UN5 1328 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 CDKL5O76039 1030 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 CABP4P57796 275 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 TRIM29Q14134 588 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 KSR2Q6VAB6 950 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 LIMCH1Q9UPQ0 1083 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 TBC1D2BQ9UPU7 963 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 CHMP3Q9Y3E7 222 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 PTPRMP28827 1452 aa6.98□□□□□ -1.29
RTTN-209ENST00000583043 HOXC9P31274 260 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 RAB3GAP1Q15042 981 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 SF3A1Q15459 793 aaKnown RBP6.97□□□□□ -1.29
RTTN-209ENST00000583043 BLOC1S2Q6QNY1 142 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 C8orf58Q8NAV2 365 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 C1orf115Q9H7X2 142 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 IGSF1Q8N6C5 1336 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 CAVIN1Q6NZI2 390 aaKnown RBP6.97□□□□□ -1.29
RTTN-209ENST00000583043 C19orf44Q9H6X5 657 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 RALYLQ86SE5 291 aaKnown RBP6.97□□□□□ -1.29
RTTN-209ENST00000583043 DIP2AQ14689 1571 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 CPLX1O14810 134 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 CTAGE5O15320 804 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 CCDC192P0DO97 292 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 SART3Q15020 963 aaKnown RBP6.97□□□□□ -1.29
RTTN-209ENST00000583043 SASS6Q6UVJ0 657 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms