RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 PIK3C2AO00443 1686 aa10.56□□□□□ -0.72
NF1-222ENST00000582892 ADCY9O60503 1353 aa10.55□□□□□ -0.72
NF1-222ENST00000582892 SLIT3O75094 1523 aa10.55□□□□□ -0.72
NF1-222ENST00000582892 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
NF1-222ENST00000582892 GPBP1L1Q9HC44 474 aaPredicted RBP10.55□□□□□ -0.72
NF1-222ENST00000582892 KCNQ4P56696 695 aa10.54□□□□□ -0.72
NF1-222ENST00000582892 PNPLA7Q6ZV29 1317 aa10.54□□□□□ -0.72
NF1-222ENST00000582892 TNS2Q63HR2 1409 aa10.53□□□□□ -0.72
NF1-222ENST00000582892 MPHOSPH9Q99550 1183 aa10.53□□□□□ -0.72
NF1-222ENST00000582892 CDK19Q9BWU1 502 aa10.53□□□□□ -0.72
NF1-222ENST00000582892 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
NF1-222ENST00000582892 WDR17Q8IZU2 1322 aa10.53□□□□□ -0.72
NF1-222ENST00000582892 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
NF1-222ENST00000582892 POTEGQ6S5H5 508 aa10.52□□□□□ -0.73
NF1-222ENST00000582892 DNAJC5GQ8N7S2 189 aa10.52□□□□□ -0.73
NF1-222ENST00000582892 WWC3Q9ULE0 1092 aa10.52□□□□□ -0.73
NF1-222ENST00000582892 WDR90Q96KV7 1748 aa10.52□□□□□ -0.73
NF1-222ENST00000582892 USP6P35125 1406 aa10.51□□□□□ -0.73
NF1-222ENST00000582892 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
NF1-222ENST00000582892 PDE4AP27815 886 aa10.51□□□□□ -0.73
NF1-222ENST00000582892 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
NF1-222ENST00000582892 ABCC6O95255 1503 aa10.51□□□□□ -0.73
NF1-222ENST00000582892 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
NF1-222ENST00000582892 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
NF1-222ENST00000582892 KIF3CO14782 793 aa10.5□□□□□ -0.73
NF1-222ENST00000582892 POLD1P28340 1107 aa10.5□□□□□ -0.73
NF1-222ENST00000582892 HTRA3P83110 453 aa10.5□□□□□ -0.73
NF1-222ENST00000582892 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
NF1-222ENST00000582892 BRD4O60885 1362 aaPredicted RBP10.5□□□□□ -0.73
NF1-222ENST00000582892 GRIN3BO60391 1043 aa10.49□□□□□ -0.73
NF1-222ENST00000582892 MSL1Q68DK7 614 aa10.49□□□□□ -0.73
NF1-222ENST00000582892 LY75O60449 1722 aa10.49□□□□□ -0.73
NF1-222ENST00000582892 PPIP5K1Q6PFW1 1433 aa10.49□□□□□ -0.73
NF1-222ENST00000582892 EXOC5O00471 708 aa10.48□□□□□ -0.73
NF1-222ENST00000582892 CARD10Q9BWT7 1032 aa10.48□□□□□ -0.73
NF1-222ENST00000582892 GPHNQ9NQX3 736 aaPredicted RBP10.48□□□□□ -0.73
NF1-222ENST00000582892 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
NF1-222ENST00000582892 CSB-PGBD3P0DP91 1061 aa10.47□□□□□ -0.73
NF1-222ENST00000582892 NFAT5O94916 1531 aa10.47□□□□□ -0.73
NF1-222ENST00000582892 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
NF1-222ENST00000582892 C2orf72A6NCS6 295 aa10.46□□□□□ -0.73
NF1-222ENST00000582892 SLC16A10Q8TF71 515 aa10.46□□□□□ -0.73
NF1-222ENST00000582892 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.73
NF1-222ENST00000582892 TFCP2L1Q9NZI6 479 aa10.46□□□□□ -0.73
NF1-222ENST00000582892 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
NF1-222ENST00000582892 APLP1P51693 650 aa10.45□□□□□ -0.74
NF1-222ENST00000582892 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
NF1-222ENST00000582892 ARHGEF25Q86VW2 580 aa10.45□□□□□ -0.74
NF1-222ENST00000582892 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
NF1-222ENST00000582892 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
NF1-222ENST00000582892 LTN1O94822 1766 aa10.44□□□□□ -0.74
NF1-222ENST00000582892 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
NF1-222ENST00000582892 TMEM92Q6UXU6 159 aa10.44□□□□□ -0.74
NF1-222ENST00000582892 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
NF1-222ENST00000582892 CRISPLD2Q9H0B8 497 aa10.44□□□□□ -0.74
NF1-222ENST00000582892 PRELPP51888 382 aa10.43□□□□□ -0.74
NF1-222ENST00000582892 FOXK1P85037 733 aa10.43□□□□□ -0.74
NF1-222ENST00000582892 COL23A1Q86Y22 540 aaPredicted RBP10.43□□□□□ -0.74
NF1-222ENST00000582892 DCAF11Q8TEB1 546 aa10.43□□□□□ -0.74
NF1-222ENST00000582892 CCDC7Q96M83 1385 aa10.42□□□□□ -0.74
NF1-222ENST00000582892 TOGARAM1Q9Y4F4 1720 aa10.42□□□□□ -0.74
NF1-222ENST00000582892 C5P01031 1676 aa10.42□□□□□ -0.74
NF1-222ENST00000582892 TAF1LQ8IZX4 1826 aa10.42□□□□□ -0.74
NF1-222ENST00000582892 NSD2O96028 1365 aa10.41□□□□□ -0.74
NF1-222ENST00000582892 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
NF1-222ENST00000582892 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
NF1-222ENST00000582892 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
NF1-222ENST00000582892 CABP1Q9NZU7 370 aa10.41□□□□□ -0.74
NF1-222ENST00000582892 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
NF1-222ENST00000582892 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.74
NF1-222ENST00000582892 RGPD2P0DJD1 1756 aa10.4□□□□□ -0.74
NF1-222ENST00000582892 N4BP2Q86UW6 1770 aaPredicted RBP10.4□□□□□ -0.74
NF1-222ENST00000582892 SMIM5Q71RC9 77 aa10.4□□□□□ -0.74
NF1-222ENST00000582892 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
NF1-222ENST00000582892 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
NF1-222ENST00000582892 NMRK2Q9NPI5 230 aa10.4□□□□□ -0.74
NF1-222ENST00000582892 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
NF1-222ENST00000582892 NLRP2Q9NX02 1062 aa10.4□□□□□ -0.74
NF1-222ENST00000582892 IGSF1Q8N6C5 1336 aa10.39□□□□□ -0.75
NF1-222ENST00000582892 SLC27A3Q5K4L6 730 aa10.39□□□□□ -0.75
NF1-222ENST00000582892 KLRG1Q96E93 195 aa10.39□□□□□ -0.75
NF1-222ENST00000582892 ERBB3P21860 1342 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 SLC34A2O95436 690 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 NEUROD1Q13562 356 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 PPP1R15BQ5SWA1 713 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 AMIGO3Q86WK7 504 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 JMYQ8N9B5 988 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 DDX54Q8TDD1 881 aaKnown RBP10.38□□□□□ -0.75
NF1-222ENST00000582892 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
NF1-222ENST00000582892 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 CD2APQ9Y5K6 639 aa10.38□□□□□ -0.75
NF1-222ENST00000582892 TTC21BQ7Z4L5 1316 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 TOMM70O94826 608 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 IL2RBP14784 551 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
NF1-222ENST00000582892 MFSD10Q14728 455 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 NBPF1Q3BBV0 1214 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 UBR3Q6ZT12 1888 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 PLPP6Q8IY26 295 aa10.37□□□□□ -0.75
NF1-222ENST00000582892 KIAA1210Q9ULL0 1709 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms