RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 FANCIQ9NVI1 1328 aa15.61■□□□□ 0.09
CCDC57-216ENST00000582885 RBM6P78332 1123 aaKnown RBP15.6■□□□□ 0.09
CCDC57-216ENST00000582885 SLC52A2Q9HAB3 445 aa15.6■□□□□ 0.09
CCDC57-216ENST00000582885 MBIPQ9NS73 344 aa15.59■□□□□ 0.09
CCDC57-216ENST00000582885 CT47B1P0C2W7 299 aaPredicted RBP15.58■□□□□ 0.08
CCDC57-216ENST00000582885 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
CCDC57-216ENST00000582885 LAS1LQ9Y4W2 734 aaKnown RBP15.58■□□□□ 0.08
CCDC57-216ENST00000582885 BCL9O00512 1426 aa15.58■□□□□ 0.08
CCDC57-216ENST00000582885 ILDR1Q86SU0 546 aaPredicted RBP15.57■□□□□ 0.08
CCDC57-216ENST00000582885 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
CCDC57-216ENST00000582885 RGS17Q9UGC6 210 aaPredicted RBP15.57■□□□□ 0.08
CCDC57-216ENST00000582885 NHSQ6T4R5 1651 aa15.57■□□□□ 0.08
CCDC57-216ENST00000582885 CABP4P57796 275 aa15.56■□□□□ 0.08
CCDC57-216ENST00000582885 SEPT12Q8IYM1 358 aa15.56■□□□□ 0.08
CCDC57-216ENST00000582885 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
CCDC57-216ENST00000582885 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
CCDC57-216ENST00000582885 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
CCDC57-216ENST00000582885 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
CCDC57-216ENST00000582885 A0A0G2JS52 829 aa15.54■□□□□ 0.08
CCDC57-216ENST00000582885 RXRBP28702 533 aa15.54■□□□□ 0.08
CCDC57-216ENST00000582885 MYT1Q01538 1121 aa15.54■□□□□ 0.08
CCDC57-216ENST00000582885 EXOSC9Q06265 439 aaKnown RBP15.54■□□□□ 0.08
CCDC57-216ENST00000582885 ZNF428Q96B54 188 aa15.54■□□□□ 0.08
CCDC57-216ENST00000582885 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
CCDC57-216ENST00000582885 BTAF1O14981 1849 aa15.53■□□□□ 0.08
CCDC57-216ENST00000582885 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
CCDC57-216ENST00000582885 ZNF831Q5JPB2 1677 aa15.53■□□□□ 0.08
CCDC57-216ENST00000582885 HEG1Q9ULI3 1381 aa15.52■□□□□ 0.08
CCDC57-216ENST00000582885 C5P01031 1676 aa15.52■□□□□ 0.08
CCDC57-216ENST00000582885 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.08
CCDC57-216ENST00000582885 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.08
CCDC57-216ENST00000582885 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
CCDC57-216ENST00000582885 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
CCDC57-216ENST00000582885 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
CCDC57-216ENST00000582885 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
CCDC57-216ENST00000582885 VAMP4O75379 141 aa15.5■□□□□ 0.07
CCDC57-216ENST00000582885 HOXB7P09629 217 aa15.5■□□□□ 0.07
CCDC57-216ENST00000582885 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
CCDC57-216ENST00000582885 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
CCDC57-216ENST00000582885 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
CCDC57-216ENST00000582885 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
CCDC57-216ENST00000582885 PIGBQ92521 554 aa15.49■□□□□ 0.07
CCDC57-216ENST00000582885 CHMP4AQ9BY43 222 aa15.49■□□□□ 0.07
CCDC57-216ENST00000582885 KCNQ3O43525 872 aa15.48■□□□□ 0.07
CCDC57-216ENST00000582885 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
CCDC57-216ENST00000582885 ALDH1L2Q3SY69 923 aa15.48■□□□□ 0.07
CCDC57-216ENST00000582885 TTC5Q8N0Z6 440 aa15.48■□□□□ 0.07
CCDC57-216ENST00000582885 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
CCDC57-216ENST00000582885 RGS12O14924 1447 aa15.48■□□□□ 0.07
CCDC57-216ENST00000582885 LY75O60449 1722 aa15.48■□□□□ 0.07
CCDC57-216ENST00000582885 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
CCDC57-216ENST00000582885 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
CCDC57-216ENST00000582885 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
CCDC57-216ENST00000582885 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
CCDC57-216ENST00000582885 RARSP54136 660 aaKnown RBP15.46■□□□□ 0.07
CCDC57-216ENST00000582885 SLC39A6Q13433 755 aa15.46■□□□□ 0.07
CCDC57-216ENST00000582885 ATG3Q9NT62 314 aa15.46■□□□□ 0.07
CCDC57-216ENST00000582885 TJP1Q07157 1748 aa15.46■□□□□ 0.06
CCDC57-216ENST00000582885 BRPF1P55201 1214 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-216ENST00000582885 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
CCDC57-216ENST00000582885 SYTL4Q96C24 671 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-216ENST00000582885 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-216ENST00000582885 COL5A3P25940 1745 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-216ENST00000582885 ELL2O00472 640 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-216ENST00000582885 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
CCDC57-216ENST00000582885 SMARCC1Q92922 1105 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-216ENST00000582885 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
CCDC57-216ENST00000582885 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
CCDC57-216ENST00000582885 TAF1LQ8IZX4 1826 aa15.44■□□□□ 0.06
CCDC57-216ENST00000582885 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
CCDC57-216ENST00000582885 SSH1Q8WYL5 1049 aa15.43■□□□□ 0.06
CCDC57-216ENST00000582885 SUPT16HQ9Y5B9 1047 aaKnown RBP15.43■□□□□ 0.06
CCDC57-216ENST00000582885 RGPD3A6NKT7 1758 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-216ENST00000582885 RGPD4Q7Z3J3 1758 aa15.42■□□□□ 0.06
CCDC57-216ENST00000582885 KCNQ2O43526 872 aa15.42■□□□□ 0.06
CCDC57-216ENST00000582885 FAM182BQ5T319 152 aa15.42■□□□□ 0.06
CCDC57-216ENST00000582885 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
CCDC57-216ENST00000582885 TEX13AQ9BXU3 409 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-216ENST00000582885 BCL11BQ9C0K0 894 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-216ENST00000582885 TNS1Q9HBL0 1735 aaKnown RBP15.42■□□□□ 0.06
CCDC57-216ENST00000582885 RREB1Q92766 1687 aa15.41■□□□□ 0.06
CCDC57-216ENST00000582885 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
CCDC57-216ENST00000582885 BCAR3O75815 825 aa15.4■□□□□ 0.06
CCDC57-216ENST00000582885 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
CCDC57-216ENST00000582885 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.4■□□□□ 0.06
CCDC57-216ENST00000582885 SMC4Q9NTJ3 1288 aa15.4■□□□□ 0.06
CCDC57-216ENST00000582885 KIF16BQ96L93 1317 aa15.4■□□□□ 0.06
CCDC57-216ENST00000582885 PTCD1O75127 700 aaKnown RBP15.39■□□□□ 0.05
CCDC57-216ENST00000582885 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
CCDC57-216ENST00000582885 MRPL50Q8N5N7 158 aaKnown RBP15.39■□□□□ 0.05
CCDC57-216ENST00000582885 STK31Q9BXU1 1019 aa15.39■□□□□ 0.05
CCDC57-216ENST00000582885 ERBB4Q15303 1308 aa15.39■□□□□ 0.05
CCDC57-216ENST00000582885 MYH14Q7Z406 1995 aaKnown RBP15.38■□□□□ 0.05
CCDC57-216ENST00000582885 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
CCDC57-216ENST00000582885 ARHGAP45Q92619 1136 aa15.38■□□□□ 0.05
CCDC57-216ENST00000582885 DBF4Q9UBU7 674 aaPredicted RBP15.38■□□□□ 0.05
CCDC57-216ENST00000582885 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
CCDC57-216ENST00000582885 PTF1AQ7RTS3 328 aa15.37■□□□□ 0.05
CCDC57-216ENST00000582885 USP16Q9Y5T5 823 aa15.37■□□□□ 0.05
CCDC57-216ENST00000582885 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms