RNA–Protein interactions for RNA: ENST00000582856.2

RN7SL556P-201, Transcript of RNA, 7SL, cytoplasmic 556, pseudogene, humanhuman

BASIC

Gene RN7SL556P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL556P-201ENST00000582856 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
RN7SL556P-201ENST00000582856 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
RN7SL556P-201ENST00000582856 KCNQ4P56696 695 aa18.19■□□□□ 0.5
RN7SL556P-201ENST00000582856 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
RN7SL556P-201ENST00000582856 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
RN7SL556P-201ENST00000582856 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 SLC27A3Q5K4L6 730 aa18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
RN7SL556P-201ENST00000582856 NEFMP07197 916 aa18.17■□□□□ 0.5
RN7SL556P-201ENST00000582856 TJP1Q07157 1748 aa18.17■□□□□ 0.5
RN7SL556P-201ENST00000582856 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
RN7SL556P-201ENST00000582856 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
RN7SL556P-201ENST00000582856 MCM10Q7L590 875 aa18.16■□□□□ 0.5
RN7SL556P-201ENST00000582856 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
RN7SL556P-201ENST00000582856 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
RN7SL556P-201ENST00000582856 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
RN7SL556P-201ENST00000582856 C4BP0C0L5 1744 aa18.15■□□□□ 0.5
RN7SL556P-201ENST00000582856 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
RN7SL556P-201ENST00000582856 CASZ1Q86V15 1759 aa18.14■□□□□ 0.5
RN7SL556P-201ENST00000582856 LOC102724428A0A0B4J2F2 783 aa18.14■□□□□ 0.49
RN7SL556P-201ENST00000582856 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
RN7SL556P-201ENST00000582856 SIK1P57059 783 aa18.14■□□□□ 0.49
RN7SL556P-201ENST00000582856 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
RN7SL556P-201ENST00000582856 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
RN7SL556P-201ENST00000582856 PSDA5PKW4 1024 aaPredicted RBP18.13■□□□□ 0.49
RN7SL556P-201ENST00000582856 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
RN7SL556P-201ENST00000582856 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
RN7SL556P-201ENST00000582856 ZNF827Q17R98 1081 aa18.13■□□□□ 0.49
RN7SL556P-201ENST00000582856 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
RN7SL556P-201ENST00000582856 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 TEFQ10587 303 aa18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 ITPK1Q13572 414 aa18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 NBPF14Q5TI25 921 aa18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
RN7SL556P-201ENST00000582856 RIPK4P57078 832 aa18.11■□□□□ 0.49
RN7SL556P-201ENST00000582856 SLC15A2Q16348 729 aa18.11■□□□□ 0.49
RN7SL556P-201ENST00000582856 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
RN7SL556P-201ENST00000582856 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
RN7SL556P-201ENST00000582856 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
RN7SL556P-201ENST00000582856 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
RN7SL556P-201ENST00000582856 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
RN7SL556P-201ENST00000582856 LINC00116Q8NCU8 138 aa18.09■□□□□ 0.49
RN7SL556P-201ENST00000582856 STK32BQ9NY57 414 aa18.09■□□□□ 0.49
RN7SL556P-201ENST00000582856 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
RN7SL556P-201ENST00000582856 APAF1O14727 1248 aa18.08■□□□□ 0.48
RN7SL556P-201ENST00000582856 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
RN7SL556P-201ENST00000582856 KCNQ3O43525 872 aa18.07■□□□□ 0.48
RN7SL556P-201ENST00000582856 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
RN7SL556P-201ENST00000582856 PDGFDQ9GZP0 370 aaPredicted RBP18.07■□□□□ 0.48
RN7SL556P-201ENST00000582856 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
RN7SL556P-201ENST00000582856 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
RN7SL556P-201ENST00000582856 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
RN7SL556P-201ENST00000582856 AMIGO3Q86WK7 504 aa18.05■□□□□ 0.48
RN7SL556P-201ENST00000582856 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
RN7SL556P-201ENST00000582856 PNPLA7Q6ZV29 1317 aa18.04■□□□□ 0.48
RN7SL556P-201ENST00000582856 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
RN7SL556P-201ENST00000582856 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
RN7SL556P-201ENST00000582856 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
RN7SL556P-201ENST00000582856 MIS18AQ9NYP9 233 aa18.04■□□□□ 0.48
RN7SL556P-201ENST00000582856 DNAJC10Q8IXB1 793 aa18.03■□□□□ 0.48
RN7SL556P-201ENST00000582856 MIER1Q8N108 512 aa18.03■□□□□ 0.48
RN7SL556P-201ENST00000582856 LAMB4A4D0S4 1761 aa18.03■□□□□ 0.48
RN7SL556P-201ENST00000582856 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
RN7SL556P-201ENST00000582856 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
RN7SL556P-201ENST00000582856 HEG1Q9ULI3 1381 aa18.03■□□□□ 0.48
RN7SL556P-201ENST00000582856 LRP5O75197 1615 aa18.02■□□□□ 0.48
RN7SL556P-201ENST00000582856 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.48
RN7SL556P-201ENST00000582856 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
RN7SL556P-201ENST00000582856 TFCP2L1Q9NZI6 479 aa18.02■□□□□ 0.48
RN7SL556P-201ENST00000582856 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
RN7SL556P-201ENST00000582856 SMIM5Q71RC9 77 aa18.01■□□□□ 0.47
RN7SL556P-201ENST00000582856 HMGB2P26583 209 aaKnown RBP18■□□□□ 0.47
RN7SL556P-201ENST00000582856 RC3H1Q5TC82 1133 aaKnown RBP18■□□□□ 0.47
RN7SL556P-201ENST00000582856 AK7Q96M32 723 aa18■□□□□ 0.47
RN7SL556P-201ENST00000582856 FMNL2Q96PY5 1086 aa18■□□□□ 0.47
RN7SL556P-201ENST00000582856 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
RN7SL556P-201ENST00000582856 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
RN7SL556P-201ENST00000582856 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
RN7SL556P-201ENST00000582856 GNPATO15228 680 aa17.98■□□□□ 0.47
RN7SL556P-201ENST00000582856 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
RN7SL556P-201ENST00000582856 PRAMEF22A3QJZ6 481 aa17.97■□□□□ 0.47
RN7SL556P-201ENST00000582856 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
RN7SL556P-201ENST00000582856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 CHL1O00533 1208 aa17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 PHF14O94880 888 aa17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 SSFA2P28290 1259 aa17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 EIF4A1P60842 406 aaKnown RBP17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 CCDC27Q2M243 656 aa17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 BABAM1Q9NWV8 329 aa17.96■□□□□ 0.47
RN7SL556P-201ENST00000582856 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
RN7SL556P-201ENST00000582856 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
RN7SL556P-201ENST00000582856 WWC1Q8IX03 1113 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms