RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
NDEL1-214ENST00000582665 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-214ENST00000582665 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
NDEL1-214ENST00000582665 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
NDEL1-214ENST00000582665 TEFQ10587 303 aa13.17□□□□□ -0.3
NDEL1-214ENST00000582665 WWC1Q8IX03 1113 aa13.17□□□□□ -0.3
NDEL1-214ENST00000582665 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-214ENST00000582665 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
NDEL1-214ENST00000582665 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
NDEL1-214ENST00000582665 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
NDEL1-214ENST00000582665 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-214ENST00000582665 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
NDEL1-214ENST00000582665 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
NDEL1-214ENST00000582665 CHL1O00533 1208 aa13.15□□□□□ -0.3
NDEL1-214ENST00000582665 APBA3O96018 575 aa13.15□□□□□ -0.3
NDEL1-214ENST00000582665 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
NDEL1-214ENST00000582665 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
NDEL1-214ENST00000582665 CAMKK2Q96RR4 588 aa13.15□□□□□ -0.3
NDEL1-214ENST00000582665 IL16Q14005 1332 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 LY75O60449 1722 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 SOCS7O14512 581 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 ZNF790Q6PG37 636 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 PROM2Q8N271 834 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
NDEL1-214ENST00000582665 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
NDEL1-214ENST00000582665 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
NDEL1-214ENST00000582665 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
NDEL1-214ENST00000582665 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
NDEL1-214ENST00000582665 BAG6P46379 1132 aa13.13□□□□□ -0.31
NDEL1-214ENST00000582665 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
NDEL1-214ENST00000582665 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
NDEL1-214ENST00000582665 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
NDEL1-214ENST00000582665 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
NDEL1-214ENST00000582665 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 SLC39A6Q13433 755 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 SLC4A9Q96Q91 983 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
NDEL1-214ENST00000582665 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
NDEL1-214ENST00000582665 KCNQ3O43525 872 aa13.11□□□□□ -0.31
NDEL1-214ENST00000582665 SIK1P57059 783 aa13.11□□□□□ -0.31
NDEL1-214ENST00000582665 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
NDEL1-214ENST00000582665 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
NDEL1-214ENST00000582665 RREB1Q92766 1687 aa13.11□□□□□ -0.31
NDEL1-214ENST00000582665 GNAI1P63096 354 aa13.1□□□□□ -0.31
NDEL1-214ENST00000582665 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
NDEL1-214ENST00000582665 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
NDEL1-214ENST00000582665 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
NDEL1-214ENST00000582665 ZNF496Q96IT1 587 aaPredicted RBP13.1□□□□□ -0.31
NDEL1-214ENST00000582665 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
NDEL1-214ENST00000582665 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
NDEL1-214ENST00000582665 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
NDEL1-214ENST00000582665 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
NDEL1-214ENST00000582665 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
NDEL1-214ENST00000582665 TSPYL4Q9UJ04 414 aa13.09□□□□□ -0.31
NDEL1-214ENST00000582665 PTCD1O75127 700 aaKnown RBP13.08□□□□□ -0.32
NDEL1-214ENST00000582665 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
NDEL1-214ENST00000582665 ITPK1Q13572 414 aa13.08□□□□□ -0.32
NDEL1-214ENST00000582665 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
NDEL1-214ENST00000582665 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
NDEL1-214ENST00000582665 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
NDEL1-214ENST00000582665 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
NDEL1-214ENST00000582665 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
NDEL1-214ENST00000582665 TJP1Q07157 1748 aa13.07□□□□□ -0.32
NDEL1-214ENST00000582665 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
NDEL1-214ENST00000582665 NUP188Q5SRE5 1749 aa13.06□□□□□ -0.32
NDEL1-214ENST00000582665 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
NDEL1-214ENST00000582665 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
NDEL1-214ENST00000582665 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
NDEL1-214ENST00000582665 C5P01031 1676 aa13.05□□□□□ -0.32
NDEL1-214ENST00000582665 TAF1LQ8IZX4 1826 aa13.05□□□□□ -0.32
NDEL1-214ENST00000582665 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
NDEL1-214ENST00000582665 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
NDEL1-214ENST00000582665 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
NDEL1-214ENST00000582665 KCNQ4P56696 695 aa13.05□□□□□ -0.32
NDEL1-214ENST00000582665 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
NDEL1-214ENST00000582665 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
NDEL1-214ENST00000582665 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
NDEL1-214ENST00000582665 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-214ENST00000582665 E9PSI1 815 aa13.04□□□□□ -0.32
NDEL1-214ENST00000582665 HOXB7P09629 217 aa13.04□□□□□ -0.32
NDEL1-214ENST00000582665 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
NDEL1-214ENST00000582665 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
NDEL1-214ENST00000582665 LINC00116Q8NCU8 138 aa13.04□□□□□ -0.32
NDEL1-214ENST00000582665 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
NDEL1-214ENST00000582665 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
NDEL1-214ENST00000582665 TEX13AQ9BXU3 409 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-214ENST00000582665 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
NDEL1-214ENST00000582665 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
NDEL1-214ENST00000582665 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
NDEL1-214ENST00000582665 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
NDEL1-214ENST00000582665 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
NDEL1-214ENST00000582665 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
NDEL1-214ENST00000582665 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
NDEL1-214ENST00000582665 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
NDEL1-214ENST00000582665 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
NDEL1-214ENST00000582665 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms