RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 ADAMTS7Q9UKP4 1686 aa13.75□□□□□ -0.21
PPP4R1-220ENST00000581835 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-220ENST00000581835 PTGER2P43116 358 aa13.75□□□□□ -0.21
PPP4R1-220ENST00000581835 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
PPP4R1-220ENST00000581835 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
PPP4R1-220ENST00000581835 UBR3Q6ZT12 1888 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 ITPK1Q13572 414 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 RALBP1Q15311 655 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 ZNF831Q5JPB2 1677 aa13.74□□□□□ -0.21
PPP4R1-220ENST00000581835 COL24A1Q17RW2 1714 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 FCHSD2O94868 740 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 GAS2L2Q8NHY3 880 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 MRC1P22897 1456 aa13.73□□□□□ -0.21
PPP4R1-220ENST00000581835 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
PPP4R1-220ENST00000581835 AK7Q96M32 723 aa13.72□□□□□ -0.21
PPP4R1-220ENST00000581835 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 MYH14Q7Z406 1995 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 COL5A3P25940 1745 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 IL17REQ8NFR9 667 aa13.71□□□□□ -0.21
PPP4R1-220ENST00000581835 MSH5O43196 834 aa13.7□□□□□ -0.22
PPP4R1-220ENST00000581835 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-220ENST00000581835 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-220ENST00000581835 SMIM5Q71RC9 77 aa13.69□□□□□ -0.22
PPP4R1-220ENST00000581835 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-220ENST00000581835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-220ENST00000581835 SSFA2P28290 1259 aa13.68□□□□□ -0.22
PPP4R1-220ENST00000581835 SLC39A6Q13433 755 aa13.68□□□□□ -0.22
PPP4R1-220ENST00000581835 ARXQ96QS3 562 aa13.68□□□□□ -0.22
PPP4R1-220ENST00000581835 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-220ENST00000581835 TJP1Q07157 1748 aa13.67□□□□□ -0.22
PPP4R1-220ENST00000581835 DLG5Q8TDM6 1919 aa13.67□□□□□ -0.22
PPP4R1-220ENST00000581835 GNPATO15228 680 aa13.67□□□□□ -0.22
PPP4R1-220ENST00000581835 PHF14O94880 888 aa13.67□□□□□ -0.22
PPP4R1-220ENST00000581835 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
PPP4R1-220ENST00000581835 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
PPP4R1-220ENST00000581835 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
PPP4R1-220ENST00000581835 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
PPP4R1-220ENST00000581835 POLD1P28340 1107 aa13.66□□□□□ -0.22
PPP4R1-220ENST00000581835 TEFQ10587 303 aa13.66□□□□□ -0.22
PPP4R1-220ENST00000581835 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
PPP4R1-220ENST00000581835 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
PPP4R1-220ENST00000581835 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
PPP4R1-220ENST00000581835 UTRNP46939 3433 aa13.65□□□□□ -0.22
PPP4R1-220ENST00000581835 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-220ENST00000581835 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
PPP4R1-220ENST00000581835 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 NEFMP07197 916 aa13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 CRKLP46109 303 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 SYT17Q9BSW7 474 aa13.64□□□□□ -0.23
PPP4R1-220ENST00000581835 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-220ENST00000581835 ZNF790Q6PG37 636 aa13.63□□□□□ -0.23
PPP4R1-220ENST00000581835 MCM10Q7L590 875 aa13.63□□□□□ -0.23
PPP4R1-220ENST00000581835 DNAJC10Q8IXB1 793 aa13.63□□□□□ -0.23
PPP4R1-220ENST00000581835 VSIG10Q8N0Z9 540 aa13.63□□□□□ -0.23
PPP4R1-220ENST00000581835 PNNQ9H307 717 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-220ENST00000581835 ADRA2BP18089 450 aa13.62□□□□□ -0.23
PPP4R1-220ENST00000581835 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
PPP4R1-220ENST00000581835 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-220ENST00000581835 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
PPP4R1-220ENST00000581835 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-220ENST00000581835 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
PPP4R1-220ENST00000581835 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
PPP4R1-220ENST00000581835 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-220ENST00000581835 ZNF496Q96IT1 587 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-220ENST00000581835 NFE2L2Q16236 605 aa13.6□□□□□ -0.23
PPP4R1-220ENST00000581835 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
PPP4R1-220ENST00000581835 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-220ENST00000581835 MAPK8IP3Q9UPT6 1336 aa13.6□□□□□ -0.23
PPP4R1-220ENST00000581835 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
PPP4R1-220ENST00000581835 KCNQ3O43525 872 aa13.59□□□□□ -0.23
PPP4R1-220ENST00000581835 RFC4P35249 363 aa13.59□□□□□ -0.23
PPP4R1-220ENST00000581835 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
PPP4R1-220ENST00000581835 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
PPP4R1-220ENST00000581835 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
PPP4R1-220ENST00000581835 STARD3NLO95772 234 aa13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 GYS1P13807 737 aa13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 NLGN1Q8N2Q7 840 aa13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 SOS1Q07889 1333 aaPredicted RBP13.57□□□□□ -0.24
PPP4R1-220ENST00000581835 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms