RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
SNORD55-201ENST00000581525 SIK1P57059 783 aa16.85■□□□□ 0.29
SNORD55-201ENST00000581525 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
SNORD55-201ENST00000581525 SCN11AQ9UI33 1791 aa16.84■□□□□ 0.29
SNORD55-201ENST00000581525 KCNQ4P56696 695 aa16.84■□□□□ 0.29
SNORD55-201ENST00000581525 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
SNORD55-201ENST00000581525 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
SNORD55-201ENST00000581525 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
SNORD55-201ENST00000581525 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
SNORD55-201ENST00000581525 ITPK1Q13572 414 aa16.81■□□□□ 0.28
SNORD55-201ENST00000581525 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
SNORD55-201ENST00000581525 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
SNORD55-201ENST00000581525 CASZ1Q86V15 1759 aa16.81■□□□□ 0.28
SNORD55-201ENST00000581525 LRP5O75197 1615 aa16.81■□□□□ 0.28
SNORD55-201ENST00000581525 PNPLA7Q6ZV29 1317 aa16.8■□□□□ 0.28
SNORD55-201ENST00000581525 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
SNORD55-201ENST00000581525 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
SNORD55-201ENST00000581525 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
SNORD55-201ENST00000581525 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
SNORD55-201ENST00000581525 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
SNORD55-201ENST00000581525 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
SNORD55-201ENST00000581525 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
SNORD55-201ENST00000581525 SPON1Q9HCB6 807 aa16.78■□□□□ 0.28
SNORD55-201ENST00000581525 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
SNORD55-201ENST00000581525 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
SNORD55-201ENST00000581525 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
SNORD55-201ENST00000581525 MTFR1LQ9H019 292 aa16.77■□□□□ 0.28
SNORD55-201ENST00000581525 CICQ96RK0 1608 aaPredicted RBP16.77■□□□□ 0.27
SNORD55-201ENST00000581525 C5P01031 1676 aa16.76■□□□□ 0.27
SNORD55-201ENST00000581525 PTGER2P43116 358 aa16.76■□□□□ 0.27
SNORD55-201ENST00000581525 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
SNORD55-201ENST00000581525 NEFMP07197 916 aa16.75■□□□□ 0.27
SNORD55-201ENST00000581525 SSFA2P28290 1259 aa16.75■□□□□ 0.27
SNORD55-201ENST00000581525 TEFQ10587 303 aa16.75■□□□□ 0.27
SNORD55-201ENST00000581525 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
SNORD55-201ENST00000581525 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
SNORD55-201ENST00000581525 C4BP0C0L5 1744 aa16.75■□□□□ 0.27
SNORD55-201ENST00000581525 CNTNAP4Q9C0A0 1308 aa16.74■□□□□ 0.27
SNORD55-201ENST00000581525 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
SNORD55-201ENST00000581525 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
SNORD55-201ENST00000581525 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
SNORD55-201ENST00000581525 AMIGO3Q86WK7 504 aa16.74■□□□□ 0.27
SNORD55-201ENST00000581525 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
SNORD55-201ENST00000581525 KCPQ6ZWJ8 1503 aa16.74■□□□□ 0.27
SNORD55-201ENST00000581525 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
SNORD55-201ENST00000581525 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
SNORD55-201ENST00000581525 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
SNORD55-201ENST00000581525 ANP32CO43423 234 aa16.72■□□□□ 0.27
SNORD55-201ENST00000581525 RPS6KA4O75676 772 aa16.72■□□□□ 0.27
SNORD55-201ENST00000581525 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
SNORD55-201ENST00000581525 CCDC184Q52MB2 194 aa16.72■□□□□ 0.27
SNORD55-201ENST00000581525 MCM10Q7L590 875 aa16.72■□□□□ 0.27
SNORD55-201ENST00000581525 RUNDC1Q96C34 613 aa16.72■□□□□ 0.27
SNORD55-201ENST00000581525 AK7Q96M32 723 aa16.72■□□□□ 0.27
SNORD55-201ENST00000581525 ZBTB7AO95365 584 aa16.71■□□□□ 0.27
SNORD55-201ENST00000581525 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
SNORD55-201ENST00000581525 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNORD55-201ENST00000581525 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
SNORD55-201ENST00000581525 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
SNORD55-201ENST00000581525 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
SNORD55-201ENST00000581525 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
SNORD55-201ENST00000581525 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
SNORD55-201ENST00000581525 ADRA2BP18089 450 aa16.7■□□□□ 0.26
SNORD55-201ENST00000581525 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
SNORD55-201ENST00000581525 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
SNORD55-201ENST00000581525 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
SNORD55-201ENST00000581525 ZNF496Q96IT1 587 aaPredicted RBP16.7■□□□□ 0.26
SNORD55-201ENST00000581525 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
SNORD55-201ENST00000581525 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
SNORD55-201ENST00000581525 UBR3Q6ZT12 1888 aa16.69■□□□□ 0.26
SNORD55-201ENST00000581525 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
SNORD55-201ENST00000581525 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
SNORD55-201ENST00000581525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
SNORD55-201ENST00000581525 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
SNORD55-201ENST00000581525 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
SNORD55-201ENST00000581525 RIPK4P57078 832 aa16.68■□□□□ 0.26
SNORD55-201ENST00000581525 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
SNORD55-201ENST00000581525 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
SNORD55-201ENST00000581525 BABAM1Q9NWV8 329 aa16.68■□□□□ 0.26
SNORD55-201ENST00000581525 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
SNORD55-201ENST00000581525 TJP1Q07157 1748 aa16.67■□□□□ 0.26
SNORD55-201ENST00000581525 GNPATO15228 680 aa16.67■□□□□ 0.26
SNORD55-201ENST00000581525 KCNQ3O43525 872 aa16.67■□□□□ 0.26
SNORD55-201ENST00000581525 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
SNORD55-201ENST00000581525 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
SNORD55-201ENST00000581525 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
SNORD55-201ENST00000581525 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
SNORD55-201ENST00000581525 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
SNORD55-201ENST00000581525 CCDC87Q9NVE4 849 aa16.66■□□□□ 0.26
SNORD55-201ENST00000581525 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
SNORD55-201ENST00000581525 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
SNORD55-201ENST00000581525 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
SNORD55-201ENST00000581525 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
SNORD55-201ENST00000581525 STARD3NLO95772 234 aa16.64■□□□□ 0.25
SNORD55-201ENST00000581525 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
SNORD55-201ENST00000581525 ARXQ96QS3 562 aa16.63■□□□□ 0.25
SNORD55-201ENST00000581525 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
SNORD55-201ENST00000581525 PHF14O94880 888 aa16.62■□□□□ 0.25
SNORD55-201ENST00000581525 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
SNORD55-201ENST00000581525 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms