RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 ZNF530Q6P9A1 599 aaPredicted RBP21.59■■□□□ 1.05
ATG13-227ENST00000581416 MTHFSP49914 203 aa21.58■■□□□ 1.05
ATG13-227ENST00000581416 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.05
ATG13-227ENST00000581416 SLC4A9Q96Q91 983 aa21.58■■□□□ 1.05
ATG13-227ENST00000581416 SIPA1L3O60292 1781 aaPredicted RBP21.58■■□□□ 1.04
ATG13-227ENST00000581416 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.04
ATG13-227ENST00000581416 PLEKHO1Q53GL0 409 aaPredicted RBP21.57■■□□□ 1.04
ATG13-227ENST00000581416 MSL1Q68DK7 614 aa21.57■■□□□ 1.04
ATG13-227ENST00000581416 KIAA1551Q9HCM1 1747 aa21.57■■□□□ 1.04
ATG13-227ENST00000581416 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
ATG13-227ENST00000581416 KIF13BQ9NQT8 1826 aa21.56■■□□□ 1.04
ATG13-227ENST00000581416 MRC1P22897 1456 aa21.56■■□□□ 1.04
ATG13-227ENST00000581416 ERVV-2B6SEH9 535 aa21.55■■□□□ 1.04
ATG13-227ENST00000581416 YY1P25490 414 aa21.55■■□□□ 1.04
ATG13-227ENST00000581416 NLGN2Q8NFZ4 835 aa21.55■■□□□ 1.04
ATG13-227ENST00000581416 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
ATG13-227ENST00000581416 MSH5O43196 834 aa21.54■■□□□ 1.04
ATG13-227ENST00000581416 POLD1P28340 1107 aa21.54■■□□□ 1.04
ATG13-227ENST00000581416 AMOTQ4VCS5 1084 aa21.54■■□□□ 1.04
ATG13-227ENST00000581416 AK7Q96M32 723 aa21.53■■□□□ 1.04
ATG13-227ENST00000581416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.51■■□□□ 1.03
ATG13-227ENST00000581416 PHF14O94880 888 aa21.51■■□□□ 1.03
ATG13-227ENST00000581416 HSP90AB1P08238 724 aaKnown RBP21.51■■□□□ 1.03
ATG13-227ENST00000581416 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
ATG13-227ENST00000581416 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
ATG13-227ENST00000581416 HMOX1P09601 288 aa21.5■■□□□ 1.03
ATG13-227ENST00000581416 FLAD1Q8NFF5 587 aa21.49■■□□□ 1.03
ATG13-227ENST00000581416 KCPQ6ZWJ8 1503 aa21.49■■□□□ 1.03
ATG13-227ENST00000581416 N4BP2Q86UW6 1770 aaPredicted RBP21.48■■□□□ 1.03
ATG13-227ENST00000581416 BRCA1P38398 1863 aaKnown RBP21.48■■□□□ 1.03
ATG13-227ENST00000581416 DCAF8L1A6NGE4 600 aa21.48■■□□□ 1.03
ATG13-227ENST00000581416 SSFA2P28290 1259 aa21.48■■□□□ 1.03
ATG13-227ENST00000581416 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
ATG13-227ENST00000581416 GNPATO15228 680 aa21.47■■□□□ 1.03
ATG13-227ENST00000581416 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
ATG13-227ENST00000581416 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
ATG13-227ENST00000581416 CABP4P57796 275 aa21.46■■□□□ 1.03
ATG13-227ENST00000581416 NFATC2IPQ8NCF5 419 aa21.46■■□□□ 1.03
ATG13-227ENST00000581416 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.02
ATG13-227ENST00000581416 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
ATG13-227ENST00000581416 RBM42Q9BTD8 480 aaKnown RBP21.45■■□□□ 1.02
ATG13-227ENST00000581416 LGR6Q9HBX8 967 aa21.45■■□□□ 1.02
ATG13-227ENST00000581416 MTHFSDQ2M296 383 aaKnown RBP21.44■■□□□ 1.02
ATG13-227ENST00000581416 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
ATG13-227ENST00000581416 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
ATG13-227ENST00000581416 YBX3P16989 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
ATG13-227ENST00000581416 RNMTO43148 476 aaKnown RBP21.41■■□□□ 1.02
ATG13-227ENST00000581416 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
ATG13-227ENST00000581416 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
ATG13-227ENST00000581416 GPR162Q16538 588 aa21.4■■□□□ 1.02
ATG13-227ENST00000581416 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
ATG13-227ENST00000581416 SLC52A2Q9HAB3 445 aa21.4■■□□□ 1.02
ATG13-227ENST00000581416 CD2APQ9Y5K6 639 aa21.38■■□□□ 1.01
ATG13-227ENST00000581416 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
ATG13-227ENST00000581416 ZNF784Q8NCA9 323 aaPredicted RBP21.37■■□□□ 1.01
ATG13-227ENST00000581416 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
ATG13-227ENST00000581416 RTCBQ9Y3I0 505 aaKnown RBP21.37■■□□□ 1.01
ATG13-227ENST00000581416 RPS6KA4O75676 772 aa21.36■■□□□ 1.01
ATG13-227ENST00000581416 CRKLP46109 303 aaKnown RBP21.36■■□□□ 1.01
ATG13-227ENST00000581416 SLC39A6Q13433 755 aa21.36■■□□□ 1.01
ATG13-227ENST00000581416 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
ATG13-227ENST00000581416 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
ATG13-227ENST00000581416 NRXN2Q9P2S2 1712 aa21.35■■□□□ 1.01
ATG13-227ENST00000581416 ARFGEF1Q9Y6D6 1849 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 MMP10P09238 476 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 GYS1P13807 737 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 ADRA2BP18089 450 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 INTS5Q6P9B9 1019 aaKnown RBP21.34■■□□□ 1.01
ATG13-227ENST00000581416 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 C10orf71Q711Q0 1435 aa21.34■■□□□ 1.01
ATG13-227ENST00000581416 RSPH6AQ9H0K4 717 aa21.33■■□□□ 1.01
ATG13-227ENST00000581416 SCN7AQ01118 1682 aa21.33■■□□□ 1
ATG13-227ENST00000581416 PHACTR3Q96KR7 559 aa21.32■■□□□ 1
ATG13-227ENST00000581416 IL17REQ8NFR9 667 aa21.31■■□□□ 1
ATG13-227ENST00000581416 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
ATG13-227ENST00000581416 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
ATG13-227ENST00000581416 BCORQ6W2J9 1755 aa21.3■■□□□ 1
ATG13-227ENST00000581416 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
ATG13-227ENST00000581416 CEMIPQ8WUJ3 1361 aa21.29■■□□□ 1
ATG13-227ENST00000581416 CYP19A1P11511 503 aaPredicted RBP21.29■■□□□ 1
ATG13-227ENST00000581416 PRKAR2BP31323 418 aa21.29■■□□□ 1
ATG13-227ENST00000581416 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
ATG13-227ENST00000581416 SOS1Q07889 1333 aaPredicted RBP21.29■■□□□ 1
ATG13-227ENST00000581416 ANKRD31Q8N7Z5 1873 aa21.27■■□□□ 1
ATG13-227ENST00000581416 RFC4P35249 363 aa21.27■■□□□ 1
ATG13-227ENST00000581416 NLGN1Q8N2Q7 840 aa21.27■■□□□ 1
ATG13-227ENST00000581416 GAS2L2Q8NHY3 880 aa21.27■■□□□ 1
ATG13-227ENST00000581416 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
ATG13-227ENST00000581416 KDM3BQ7LBC6 1761 aa21.27■■□□□ 1
ATG13-227ENST00000581416 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
ATG13-227ENST00000581416 DDR1Q08345 913 aa21.26■□□□□ 0.99
ATG13-227ENST00000581416 FKBP8Q14318 412 aa21.26■□□□□ 0.99
ATG13-227ENST00000581416 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
ATG13-227ENST00000581416 ZBTB1Q9Y2K1 713 aa21.26■□□□□ 0.99
ATG13-227ENST00000581416 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
ATG13-227ENST00000581416 COL15A1P39059 1388 aa21.24■□□□□ 0.99
ATG13-227ENST00000581416 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
ATG13-227ENST00000581416 ADCY9O60503 1353 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms