RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 FCHSD2O94868 740 aa18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 LINC00116Q8NCU8 138 aa18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
CUEDC1-209ENST00000581391 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
CUEDC1-209ENST00000581391 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
CUEDC1-209ENST00000581391 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
CUEDC1-209ENST00000581391 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
CUEDC1-209ENST00000581391 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
CUEDC1-209ENST00000581391 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
CUEDC1-209ENST00000581391 TUBGCP6Q96RT7 1819 aa18.17■□□□□ 0.5
CUEDC1-209ENST00000581391 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
CUEDC1-209ENST00000581391 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
CUEDC1-209ENST00000581391 GNAT3A8MTJ3 354 aa18.16■□□□□ 0.5
CUEDC1-209ENST00000581391 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
CUEDC1-209ENST00000581391 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
CUEDC1-209ENST00000581391 PLEKHF1Q96S99 279 aa18.15■□□□□ 0.5
CUEDC1-209ENST00000581391 C5P01031 1676 aa18.15■□□□□ 0.5
CUEDC1-209ENST00000581391 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
CUEDC1-209ENST00000581391 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
CUEDC1-209ENST00000581391 MCM10Q7L590 875 aa18.14■□□□□ 0.49
CUEDC1-209ENST00000581391 SPON1Q9HCB6 807 aa18.14■□□□□ 0.49
CUEDC1-209ENST00000581391 MSH5O43196 834 aa18.13■□□□□ 0.49
CUEDC1-209ENST00000581391 PHF14O94880 888 aa18.12■□□□□ 0.49
CUEDC1-209ENST00000581391 PTGER2P43116 358 aa18.12■□□□□ 0.49
CUEDC1-209ENST00000581391 LRP5O75197 1615 aa18.12■□□□□ 0.49
CUEDC1-209ENST00000581391 KCNQ3O43525 872 aa18.11■□□□□ 0.49
CUEDC1-209ENST00000581391 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
CUEDC1-209ENST00000581391 ADAMTS7Q9UKP4 1686 aa18.11■□□□□ 0.49
CUEDC1-209ENST00000581391 C4BP0C0L5 1744 aa18.11■□□□□ 0.49
CUEDC1-209ENST00000581391 AK7Q96M32 723 aa18.1■□□□□ 0.49
CUEDC1-209ENST00000581391 TEFQ10587 303 aa18.09■□□□□ 0.49
CUEDC1-209ENST00000581391 MSL1Q68DK7 614 aa18.09■□□□□ 0.49
CUEDC1-209ENST00000581391 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
CUEDC1-209ENST00000581391 SGIP1Q9BQI5 828 aa18.09■□□□□ 0.49
CUEDC1-209ENST00000581391 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
CUEDC1-209ENST00000581391 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
CUEDC1-209ENST00000581391 MRC1P22897 1456 aa18.08■□□□□ 0.49
CUEDC1-209ENST00000581391 MYH14Q7Z406 1995 aaKnown RBP18.08■□□□□ 0.49
CUEDC1-209ENST00000581391 GNPATO15228 680 aa18.08■□□□□ 0.48
CUEDC1-209ENST00000581391 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
CUEDC1-209ENST00000581391 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
CUEDC1-209ENST00000581391 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
CUEDC1-209ENST00000581391 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
CUEDC1-209ENST00000581391 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
CUEDC1-209ENST00000581391 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
CUEDC1-209ENST00000581391 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 SENP3-EIF4A1A0A087X0R7 540 aa18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 CRKLP46109 303 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
CUEDC1-209ENST00000581391 TJP1Q07157 1748 aa18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 NEFMP07197 916 aa18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 NEUROD2Q15784 382 aa18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 SLC16A10Q8TF71 515 aa18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
CUEDC1-209ENST00000581391 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 RIPK4P57078 832 aa18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 ARHGEF1Q92888 912 aaKnown RBP18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 RTCBQ9Y3I0 505 aaKnown RBP18.02■□□□□ 0.48
CUEDC1-209ENST00000581391 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 SSFA2P28290 1259 aa18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 ARXQ96QS3 562 aa18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
CUEDC1-209ENST00000581391 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
CUEDC1-209ENST00000581391 ANP32CO43423 234 aa18■□□□□ 0.47
CUEDC1-209ENST00000581391 FLAD1Q8NFF5 587 aa18■□□□□ 0.47
CUEDC1-209ENST00000581391 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
CUEDC1-209ENST00000581391 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
CUEDC1-209ENST00000581391 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
CUEDC1-209ENST00000581391 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
CUEDC1-209ENST00000581391 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
CUEDC1-209ENST00000581391 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
CUEDC1-209ENST00000581391 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
CUEDC1-209ENST00000581391 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
CUEDC1-209ENST00000581391 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
CUEDC1-209ENST00000581391 A1BGP04217 495 aa17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 POLD1P28340 1107 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms