RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	TSPYL6	Q8N831	410 aa		12.55	□□□□□ -0.4
TRIM16-222	ENST00000581224	IL17RE	Q8NFR9	667 aa		12.55	□□□□□ -0.4
TRIM16-222	ENST00000581224	VIRMA	Q69YN4	1812 aa	Known RBP	12.55	□□□□□ -0.4
TRIM16-222	ENST00000581224	ELL2	O00472	640 aa	Predicted RBP	12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	RLBP1	P12271	317 aa		12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	USHBP1	Q8N6Y0	703 aa		12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	QTRT2	Q9H974	415 aa	Known RBP	12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	PRDM11	Q9NQV5	511 aa		12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	AXIN2	Q9Y2T1	843 aa		12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	ABCC4	O15439	1325 aa		12.54	□□□□□ -0.4
TRIM16-222	ENST00000581224	RXRB	P28702	533 aa		12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	INTS3	Q68E01	1043 aa	Known RBP	12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	IFNL2	Q8IZJ0	200 aa		12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	TMEM57	Q8N5G2	664 aa		12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	ZBTB40	Q9NUA8	1239 aa		12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	CCDC9	Q9Y3X0	531 aa	Known RBP	12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	RBM19	Q9Y4C8	960 aa	Known RBP	12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	COL14A1	Q05707	1796 aa	Known RBP	12.53	□□□□□ -0.4
TRIM16-222	ENST00000581224	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	NWD2	Q9ULI1	1742 aa		12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	RNMT	O43148	476 aa	Known RBP	12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	SLC4A2	P04920	1241 aa		12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	CCT4	P50991	539 aa	Known RBP	12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	CHRNA2	Q15822	529 aa		12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	TRPC5	Q9UL62	973 aa	Predicted RBP	12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	WDR17	Q8IZU2	1322 aa		12.52	□□□□□ -0.41
TRIM16-222	ENST00000581224	ADAMTS7	Q9UKP4	1686 aa		12.51	□□□□□ -0.41
TRIM16-222	ENST00000581224	PARP4	Q9UKK3	1724 aa	Known RBP	12.51	□□□□□ -0.41
TRIM16-222	ENST00000581224	KDM3B	Q7LBC6	1761 aa		12.51	□□□□□ -0.41
TRIM16-222	ENST00000581224	BTBD11	A6QL63	1104 aa		12.51	□□□□□ -0.41
TRIM16-222	ENST00000581224	SLIT2	O94813	1529 aa		12.51	□□□□□ -0.41
TRIM16-222	ENST00000581224	SCN11A	Q9UI33	1791 aa		12.51	□□□□□ -0.41
TRIM16-222	ENST00000581224	ZBTB7B	O15156	539 aa	Predicted RBP	12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	UNC5CL	Q8IV45	518 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	GCC1	Q96CN9	775 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	DCAF5	Q96JK2	942 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	BTG4	Q9NY30	223 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	HDAC5	Q9UQL6	1122 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	ATRN	O75882	1429 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	BCL9L	Q86UU0	1499 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	PKD1L3	Q7Z443	1732 aa		12.5	□□□□□ -0.41
TRIM16-222	ENST00000581224	NRAP	Q86VF7	1730 aa		12.49	□□□□□ -0.41
TRIM16-222	ENST00000581224	EIF5B	O60841	1220 aa	Known RBP	12.49	□□□□□ -0.41
TRIM16-222	ENST00000581224	EVA1C	P58658	441 aa		12.49	□□□□□ -0.41
TRIM16-222	ENST00000581224	RBM6	P78332	1123 aa	Known RBP	12.49	□□□□□ -0.41
TRIM16-222	ENST00000581224	CARD10	Q9BWT7	1032 aa		12.49	□□□□□ -0.41
TRIM16-222	ENST00000581224	PCDHB15	Q9Y5E8	787 aa		12.49	□□□□□ -0.41
TRIM16-222	ENST00000581224	SIPA1L3	O60292	1781 aa	Predicted RBP	12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	IGHD	P01880	384 aa		12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	EIF4A1	P60842	406 aa	Known RBP	12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	HDGFL1	Q5TGJ6	251 aa		12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	TOM1L2	Q6ZVM7	507 aa		12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	STRN4	Q9NRL3	753 aa		12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224	MIS18A	Q9NYP9	233 aa		12.48	□□□□□ -0.41
TRIM16-222	ENST00000581224		A0A0G2JS52	829 aa		12.47	□□□□□ -0.41
TRIM16-222	ENST00000581224	MYT1	Q01538	1121 aa		12.47	□□□□□ -0.41
TRIM16-222	ENST00000581224	MPRIP	Q6WCQ1	1025 aa		12.47	□□□□□ -0.41
TRIM16-222	ENST00000581224	LGR6	Q9HBX8	967 aa		12.47	□□□□□ -0.41
TRIM16-222	ENST00000581224	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.47	□□□□□ -0.41
TRIM16-222	ENST00000581224	PXDNL	A1KZ92	1463 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	RGS12	O14924	1447 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	PCDH11X	Q9BZA7	1347 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	PCDH11Y	Q9BZA8	1340 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	HMMR	O75330	724 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	GNAI3	P08754	354 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	PHKG2	P15735	406 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	PDE4A	P27815	886 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	FAM161A	Q3B820	660 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	SMC5	Q8IY18	1101 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	GJD4	Q96KN9	370 aa	Predicted RBP	12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	BACH2	Q9BYV9	841 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	DBF4	Q9UBU7	674 aa	Predicted RBP	12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	TNN	Q9UQP3	1299 aa		12.46	□□□□□ -0.41
TRIM16-222	ENST00000581224	COL5A2	P05997	1499 aa	Predicted RBP	12.46	□□□□□ -0.42
TRIM16-222	ENST00000581224	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.46	□□□□□ -0.42
TRIM16-222	ENST00000581224	GLI3	P10071	1580 aa		12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	IL2RB	P14784	551 aa		12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	ANP32A	P39687	249 aa	Known RBP	12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	FLII	Q13045	1269 aa		12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	ZCRB1	Q8TBF4	217 aa	Known RBP	12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	SLC52A2	Q9HAB3	445 aa		12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	HYPK	Q9NX55	129 aa		12.45	□□□□□ -0.42
TRIM16-222	ENST00000581224	ERVV-2	B6SEH9	535 aa		12.44	□□□□□ -0.42
TRIM16-222	ENST00000581224	FKBP5	Q13451	457 aa	Predicted RBP	12.44	□□□□□ -0.42
TRIM16-222	ENST00000581224	VPS72	Q15906	364 aa		12.44	□□□□□ -0.42
TRIM16-222	ENST00000581224	TTC5	Q8N0Z6	440 aa		12.44	□□□□□ -0.42
TRIM16-222	ENST00000581224	USP35	Q9P2H5	1018 aa		12.44	□□□□□ -0.42
TRIM16-222	ENST00000581224	DDX58	O95786	925 aa	Known RBP	12.43	□□□□□ -0.42
TRIM16-222	ENST00000581224	KRT24	Q2M2I5	525 aa		12.43	□□□□□ -0.42
TRIM16-222	ENST00000581224	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.43	□□□□□ -0.42
TRIM16-222	ENST00000581224	HEG1	Q9ULI3	1381 aa		12.43	□□□□□ -0.42
TRIM16-222	ENST00000581224	MEGF6	O75095	1541 aa		12.42	□□□□□ -0.42
TRIM16-222	ENST00000581224	MRC1	P22897	1456 aa		12.42	□□□□□ -0.42
TRIM16-222	ENST00000581224	GIGYF1	O75420	1035 aa	Predicted RBP	12.42	□□□□□ -0.42
TRIM16-222	ENST00000581224	CABP4	P57796	275 aa		12.42	□□□□□ -0.42
TRIM16-222	ENST00000581224	NKX1-1	Q15270	411 aa	Predicted RBP	12.42	□□□□□ -0.42
TRIM16-222	ENST00000581224	ZNF790	Q6PG37	636 aa		12.42	□□□□□ -0.42
TRIM16-222	ENST00000581224	PDZRN3	Q9UPQ7	1066 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms