RNA–Protein interactions for RNA: ENST00000580471.1

SUPT6H-205, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-205ENST00000580471 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
SUPT6H-205ENST00000580471 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
SUPT6H-205ENST00000580471 SOX12O15370 315 aa13.21□□□□□ -0.29
SUPT6H-205ENST00000580471 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
SUPT6H-205ENST00000580471 APLP2Q06481 763 aa13.21□□□□□ -0.29
SUPT6H-205ENST00000580471 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
SUPT6H-205ENST00000580471 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
SUPT6H-205ENST00000580471 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
SUPT6H-205ENST00000580471 ITGAEP38570 1179 aa13.19□□□□□ -0.3
SUPT6H-205ENST00000580471 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
SUPT6H-205ENST00000580471 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
SUPT6H-205ENST00000580471 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
SUPT6H-205ENST00000580471 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
SUPT6H-205ENST00000580471 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
SUPT6H-205ENST00000580471 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
SUPT6H-205ENST00000580471 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
SUPT6H-205ENST00000580471 CA12O43570 354 aa13.14□□□□□ -0.31
SUPT6H-205ENST00000580471 GRM1Q13255 1194 aa13.14□□□□□ -0.31
SUPT6H-205ENST00000580471 LTN1O94822 1766 aa13.14□□□□□ -0.31
SUPT6H-205ENST00000580471 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
SUPT6H-205ENST00000580471 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
SUPT6H-205ENST00000580471 CHRNA5P30532 468 aa13.13□□□□□ -0.31
SUPT6H-205ENST00000580471 CYP4F22Q6NT55 531 aa13.13□□□□□ -0.31
SUPT6H-205ENST00000580471 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
SUPT6H-205ENST00000580471 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 SCN4AP35499 1836 aa13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 GNPATO15228 680 aa13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 ECE1P42892 770 aa13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 COL6A3P12111 3177 aa13.12□□□□□ -0.31
SUPT6H-205ENST00000580471 TMF1P82094 1093 aa13.11□□□□□ -0.31
SUPT6H-205ENST00000580471 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
SUPT6H-205ENST00000580471 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
SUPT6H-205ENST00000580471 MEGF6O75095 1541 aa13.11□□□□□ -0.31
SUPT6H-205ENST00000580471 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
SUPT6H-205ENST00000580471 AOC2O75106 756 aa13.1□□□□□ -0.31
SUPT6H-205ENST00000580471 NFKBIEO00221 500 aa13.09□□□□□ -0.31
SUPT6H-205ENST00000580471 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
SUPT6H-205ENST00000580471 MKI67P46013 3256 aaKnown RBP13.09□□□□□ -0.31
SUPT6H-205ENST00000580471 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
SUPT6H-205ENST00000580471 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
SUPT6H-205ENST00000580471 MAP2K2P36507 400 aa13.08□□□□□ -0.32
SUPT6H-205ENST00000580471 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
SUPT6H-205ENST00000580471 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
SUPT6H-205ENST00000580471 ITGB4P16144 1822 aa13.06□□□□□ -0.32
SUPT6H-205ENST00000580471 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
SUPT6H-205ENST00000580471 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
SUPT6H-205ENST00000580471 ZCRB1Q8TBF4 217 aaKnown RBP13.06□□□□□ -0.32
SUPT6H-205ENST00000580471 GYS1P13807 737 aa13.05□□□□□ -0.32
SUPT6H-205ENST00000580471 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
SUPT6H-205ENST00000580471 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
SUPT6H-205ENST00000580471 MAP1SQ66K74 1059 aaPredicted RBP13.05□□□□□ -0.32
SUPT6H-205ENST00000580471 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
SUPT6H-205ENST00000580471 MPNDQ8N594 471 aa13.05□□□□□ -0.32
SUPT6H-205ENST00000580471 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
SUPT6H-205ENST00000580471 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
SUPT6H-205ENST00000580471 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
SUPT6H-205ENST00000580471 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
SUPT6H-205ENST00000580471 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
SUPT6H-205ENST00000580471 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
SUPT6H-205ENST00000580471 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
SUPT6H-205ENST00000580471 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
SUPT6H-205ENST00000580471 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
SUPT6H-205ENST00000580471 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
SUPT6H-205ENST00000580471 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.33
SUPT6H-205ENST00000580471 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
SUPT6H-205ENST00000580471 SIK1P57059 783 aa13.01□□□□□ -0.33
SUPT6H-205ENST00000580471 ITPK1Q13572 414 aa13.01□□□□□ -0.33
SUPT6H-205ENST00000580471 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
SUPT6H-205ENST00000580471 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
SUPT6H-205ENST00000580471 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
SUPT6H-205ENST00000580471 DDR1Q08345 913 aa13□□□□□ -0.33
SUPT6H-205ENST00000580471 HPS5Q9UPZ3 1129 aa13□□□□□ -0.33
SUPT6H-205ENST00000580471 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
SUPT6H-205ENST00000580471 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.332e-8■■□□□ 12.9
SUPT6H-205ENST00000580471 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
SUPT6H-205ENST00000580471 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
SUPT6H-205ENST00000580471 RTCBQ9Y3I0 505 aaKnown RBP12.99□□□□□ -0.33
SUPT6H-205ENST00000580471 TLL2Q9Y6L7 1015 aa12.99□□□□□ -0.33
SUPT6H-205ENST00000580471 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
SUPT6H-205ENST00000580471 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
SUPT6H-205ENST00000580471 ADRA2BP18089 450 aa12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 EPHX2P34913 555 aa12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 RFC4P35249 363 aa12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 CST9Q5W186 159 aa12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 LTV1Q96GA3 475 aaPredicted RBP12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 TRIOBPQ9H2D6 2365 aa12.96□□□□□ -0.33
SUPT6H-205ENST00000580471 UNC80Q8N2C7 3258 aa12.96□□□□□ -0.34
SUPT6H-205ENST00000580471 PNMA8AQ86V59 439 aaPredicted RBP12.95□□□□□ -0.34
SUPT6H-205ENST00000580471 PIGBQ92521 554 aa12.95□□□□□ -0.34
SUPT6H-205ENST00000580471 COL5A3P25940 1745 aaPredicted RBP12.95□□□□□ -0.34
SUPT6H-205ENST00000580471 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
SUPT6H-205ENST00000580471 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
SUPT6H-205ENST00000580471 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
SUPT6H-205ENST00000580471 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
SUPT6H-205ENST00000580471 FKBP8Q14318 412 aa12.93□□□□□ -0.34
SUPT6H-205ENST00000580471 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms