RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 TMCO4Q5TGY1 634 aa9.28□□□□□ -0.92
COPS3-216ENST00000579716 ZNF592Q92610 1267 aa9.28□□□□□ -0.92
COPS3-216ENST00000579716 MAP3K10Q02779 954 aa9.27□□□□□ -0.93
COPS3-216ENST00000579716 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.93
COPS3-216ENST00000579716 RIPOR1Q6ZS17 1223 aa9.27□□□□□ -0.93
COPS3-216ENST00000579716 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
COPS3-216ENST00000579716 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
COPS3-216ENST00000579716 SPOCK3Q9BQ16 436 aa9.27□□□□□ -0.93
COPS3-216ENST00000579716 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
COPS3-216ENST00000579716 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
COPS3-216ENST00000579716 SPATA31C2B4DYI2 1134 aa9.26□□□□□ -0.93
COPS3-216ENST00000579716 CLN3Q13286 438 aa9.26□□□□□ -0.93
COPS3-216ENST00000579716 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
COPS3-216ENST00000579716 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
COPS3-216ENST00000579716 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
COPS3-216ENST00000579716 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
COPS3-216ENST00000579716 NAP1L5Q96NT1 182 aaPredicted RBP9.25□□□□□ -0.93
COPS3-216ENST00000579716 GAS2L1Q99501 681 aaPredicted RBP9.25□□□□□ -0.93
COPS3-216ENST00000579716 TRAIPQ9BWF2 469 aa9.25□□□□□ -0.93
COPS3-216ENST00000579716 ADAM23O75077 832 aa9.24□□□□□ -0.93
COPS3-216ENST00000579716 CENPBP07199 599 aaPredicted RBP9.24□□□□□ -0.93
COPS3-216ENST00000579716 SNRPNP63162 240 aaKnown RBP9.24□□□□□ -0.93
COPS3-216ENST00000579716 CERS3Q8IU89 383 aa9.24□□□□□ -0.93
COPS3-216ENST00000579716 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
COPS3-216ENST00000579716 HRH3Q9Y5N1 445 aa9.24□□□□□ -0.93
COPS3-216ENST00000579716 PPM1GO15355 546 aaPredicted RBP9.23□□□□□ -0.93
COPS3-216ENST00000579716 ZEB1P37275 1124 aaPredicted RBP9.23□□□□□ -0.93
COPS3-216ENST00000579716 BEND7Q8N7W2 519 aaPredicted RBP9.23□□□□□ -0.93
COPS3-216ENST00000579716 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
COPS3-216ENST00000579716 ENAMQ9NRM1 1142 aa9.23□□□□□ -0.93
COPS3-216ENST00000579716 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
COPS3-216ENST00000579716 OIP5O43482 229 aa9.22□□□□□ -0.93
COPS3-216ENST00000579716 MFAP1P55081 439 aaKnown RBP9.22□□□□□ -0.93
COPS3-216ENST00000579716 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
COPS3-216ENST00000579716 WDR44Q5JSH3 913 aa9.22□□□□□ -0.93
COPS3-216ENST00000579716 XP32Q5T750 250 aa9.22□□□□□ -0.93
COPS3-216ENST00000579716 SHISA8B8ZZ34 492 aa9.21□□□□□ -0.94
COPS3-216ENST00000579716 MSTNO14793 375 aa9.21□□□□□ -0.94
COPS3-216ENST00000579716 IL2RAP01589 272 aa9.21□□□□□ -0.94
COPS3-216ENST00000579716 HOXB4P17483 251 aaPredicted RBP9.21□□□□□ -0.94
COPS3-216ENST00000579716 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.94
COPS3-216ENST00000579716 ZNF428Q96B54 188 aa9.21□□□□□ -0.94
COPS3-216ENST00000579716 CWC22Q9HCG8 908 aaKnown RBP9.21□□□□□ -0.94
COPS3-216ENST00000579716 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.94
COPS3-216ENST00000579716 H7C1W4 665 aa9.2□□□□□ -0.94
COPS3-216ENST00000579716 AEBP1Q8IUX7 1158 aa9.2□□□□□ -0.94
COPS3-216ENST00000579716 ARHGEF10LQ9HCE6 1279 aa9.2□□□□□ -0.94
COPS3-216ENST00000579716 RAB6BQ9NRW1 208 aa9.2□□□□□ -0.94
COPS3-216ENST00000579716 BRPF3Q9ULD4 1205 aa9.2□□□□□ -0.94
COPS3-216ENST00000579716 KRBA1A5PL33 1030 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 F11P03951 625 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 MX2P20592 715 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 FOXR1Q6PIV2 292 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 CDCA7Q9BWT1 371 aaPredicted RBP9.19□□□□□ -0.94
COPS3-216ENST00000579716 TIMMDC1Q9NPL8 285 aa9.19□□□□□ -0.94
COPS3-216ENST00000579716 PHF20L1A8MW92 1017 aa9.18□□□□□ -0.94
COPS3-216ENST00000579716 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
COPS3-216ENST00000579716 COL8A1P27658 744 aa9.18□□□□□ -0.94
COPS3-216ENST00000579716 CENPCQ03188 943 aa9.18□□□□□ -0.94
COPS3-216ENST00000579716 NR1H3Q13133 447 aa9.18□□□□□ -0.94
COPS3-216ENST00000579716 TSGA10IPQ3SY00 556 aa9.18□□□□□ -0.94
COPS3-216ENST00000579716 NUCKS1Q9H1E3 243 aaKnown RBP9.18□□□□□ -0.94
COPS3-216ENST00000579716 PCDHB11Q9Y5F2 797 aa9.18□□□□□ -0.94
COPS3-216ENST00000579716 C2CD2LO14523 706 aa9.17□□□□□ -0.94
COPS3-216ENST00000579716 TAS1R3Q7RTX0 852 aa9.17□□□□□ -0.94
COPS3-216ENST00000579716 CCDC125Q86Z20 511 aa9.17□□□□□ -0.94
COPS3-216ENST00000579716 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
COPS3-216ENST00000579716 CCDC136Q96JN2 1154 aa9.17□□□□□ -0.94
COPS3-216ENST00000579716 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
COPS3-216ENST00000579716 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
COPS3-216ENST00000579716 NCLP19338 710 aaKnown RBP9.16□□□□□ -0.94
COPS3-216ENST00000579716 SETQ01105 290 aaPredicted RBP9.16□□□□□ -0.94
COPS3-216ENST00000579716 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
COPS3-216ENST00000579716 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
COPS3-216ENST00000579716 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
COPS3-216ENST00000579716 ESYT1Q9BSJ8 1104 aa9.16□□□□□ -0.94
COPS3-216ENST00000579716 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
COPS3-216ENST00000579716 HCN2Q9UL51 889 aa9.16□□□□□ -0.94
COPS3-216ENST00000579716 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
COPS3-216ENST00000579716 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
COPS3-216ENST00000579716 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
COPS3-216ENST00000579716 TRERF1Q96PN7 1200 aa9.15□□□□□ -0.94
COPS3-216ENST00000579716 OXCT2Q9BYC2 517 aaPredicted RBP9.15□□□□□ -0.94
COPS3-216ENST00000579716 STAU1O95793 577 aaKnown RBP9.14□□□□□ -0.95
COPS3-216ENST00000579716 CANXP27824 592 aaKnown RBP9.14□□□□□ -0.95
COPS3-216ENST00000579716 PHKA2P46019 1235 aa9.14□□□□□ -0.95
COPS3-216ENST00000579716 GNRH1P01148 92 aa9.13□□□□□ -0.95
COPS3-216ENST00000579716 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
COPS3-216ENST00000579716 IL27Q8NEV9 243 aa9.13□□□□□ -0.95
COPS3-216ENST00000579716 GZF1Q9H116 711 aaPredicted RBP9.13□□□□□ -0.95
COPS3-216ENST00000579716 GPAMQ9HCL2 828 aa9.13□□□□□ -0.95
COPS3-216ENST00000579716 NDFIP2Q9NV92 336 aa9.13□□□□□ -0.95
COPS3-216ENST00000579716 A0A0U1RQG5 324 aaPredicted RBP9.12□□□□□ -0.95
COPS3-216ENST00000579716 MCCD1P59942 119 aaPredicted RBP9.12□□□□□ -0.95
COPS3-216ENST00000579716 GALNT6Q8NCL4 622 aa9.12□□□□□ -0.95
COPS3-216ENST00000579716 SNRKQ9NRH2 765 aa9.12□□□□□ -0.95
COPS3-216ENST00000579716 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
COPS3-216ENST00000579716 PTMSP20962 102 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms