RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 MRS2Q9HD23 443 aa22.53■■□□□ 1.2
CBX3P2-201ENST00000579647 LY75O60449 1722 aa22.51■■□□□ 1.19
CBX3P2-201ENST00000579647 DCTN1Q14203 1278 aa22.51■■□□□ 1.19
CBX3P2-201ENST00000579647 NFE2L2Q16236 605 aa22.51■■□□□ 1.19
CBX3P2-201ENST00000579647 RTF1Q92541 710 aaKnown RBP22.51■■□□□ 1.19
CBX3P2-201ENST00000579647 MCM10Q7L590 875 aa22.5■■□□□ 1.19
CBX3P2-201ENST00000579647 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
CBX3P2-201ENST00000579647 TEFQ10587 303 aa22.49■■□□□ 1.19
CBX3P2-201ENST00000579647 RUNDC1Q96C34 613 aa22.49■■□□□ 1.19
CBX3P2-201ENST00000579647 RBM42Q9BTD8 480 aaKnown RBP22.49■■□□□ 1.19
CBX3P2-201ENST00000579647 STK32BQ9NY57 414 aa22.49■■□□□ 1.19
CBX3P2-201ENST00000579647 LOC102724428A0A0B4J2F2 783 aa22.48■■□□□ 1.19
CBX3P2-201ENST00000579647 SIK1P57059 783 aa22.48■■□□□ 1.19
CBX3P2-201ENST00000579647 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
CBX3P2-201ENST00000579647 SLC15A2Q16348 729 aa22.48■■□□□ 1.19
CBX3P2-201ENST00000579647 ADAMTS7Q9UKP4 1686 aa22.48■■□□□ 1.19
CBX3P2-201ENST00000579647 HTATSF1O43719 755 aaKnown RBP22.48■■□□□ 1.19
CBX3P2-201ENST00000579647 PTCD1O75127 700 aaKnown RBP22.47■■□□□ 1.19
CBX3P2-201ENST00000579647 ATP6V1AP38606 617 aa22.47■■□□□ 1.19
CBX3P2-201ENST00000579647 RIPK4P57078 832 aa22.47■■□□□ 1.19
CBX3P2-201ENST00000579647 ZNF827Q17R98 1081 aa22.47■■□□□ 1.19
CBX3P2-201ENST00000579647 PNISRQ8TF01 805 aaKnown RBP22.47■■□□□ 1.19
CBX3P2-201ENST00000579647 RRP7AQ9Y3A4 280 aaKnown RBP22.47■■□□□ 1.19
CBX3P2-201ENST00000579647 CEMIPQ8WUJ3 1361 aa22.46■■□□□ 1.19
CBX3P2-201ENST00000579647 TMPOP42166 694 aaKnown RBP22.46■■□□□ 1.19
CBX3P2-201ENST00000579647 NEUROD2Q15784 382 aa22.46■■□□□ 1.19
CBX3P2-201ENST00000579647 MRC1P22897 1456 aa22.45■■□□□ 1.18
CBX3P2-201ENST00000579647 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.18
CBX3P2-201ENST00000579647 ITPK1Q13572 414 aa22.44■■□□□ 1.18
CBX3P2-201ENST00000579647 AKT1S1Q96B36 256 aa22.44■■□□□ 1.18
CBX3P2-201ENST00000579647 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
CBX3P2-201ENST00000579647 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
CBX3P2-201ENST00000579647 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
CBX3P2-201ENST00000579647 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
CBX3P2-201ENST00000579647 BTBD11A6QL63 1104 aa22.41■■□□□ 1.18
CBX3P2-201ENST00000579647 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
CBX3P2-201ENST00000579647 PDGFDQ9GZP0 370 aaPredicted RBP22.41■■□□□ 1.18
CBX3P2-201ENST00000579647 TTC5Q8N0Z6 440 aa22.4■■□□□ 1.18
CBX3P2-201ENST00000579647 TFCP2L1Q9NZI6 479 aa22.4■■□□□ 1.18
CBX3P2-201ENST00000579647 APAF1O14727 1248 aa22.4■■□□□ 1.18
CBX3P2-201ENST00000579647 KCNQ3O43525 872 aa22.4■■□□□ 1.18
CBX3P2-201ENST00000579647 HMGB2P26583 209 aaKnown RBP22.39■■□□□ 1.17
CBX3P2-201ENST00000579647 TAF7Q15545 349 aaPredicted RBP22.39■■□□□ 1.17
CBX3P2-201ENST00000579647 ZNF790Q6PG37 636 aa22.39■■□□□ 1.17
CBX3P2-201ENST00000579647 TAF1LQ8IZX4 1826 aa22.38■■□□□ 1.17
CBX3P2-201ENST00000579647 FAM9BQ8IZU0 186 aa22.38■■□□□ 1.17
CBX3P2-201ENST00000579647 MIS18AQ9NYP9 233 aa22.38■■□□□ 1.17
CBX3P2-201ENST00000579647 C5P01031 1676 aa22.37■■□□□ 1.17
CBX3P2-201ENST00000579647 SIPA1L3O60292 1781 aaPredicted RBP22.37■■□□□ 1.17
CBX3P2-201ENST00000579647 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
CBX3P2-201ENST00000579647 LMOD3Q0VAK6 560 aa22.37■■□□□ 1.17
CBX3P2-201ENST00000579647 AK7Q96M32 723 aa22.37■■□□□ 1.17
CBX3P2-201ENST00000579647 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
CBX3P2-201ENST00000579647 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
CBX3P2-201ENST00000579647 ZNF496Q96IT1 587 aaPredicted RBP22.36■■□□□ 1.17
CBX3P2-201ENST00000579647 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
CBX3P2-201ENST00000579647 C4BP0C0L5 1744 aa22.35■■□□□ 1.17
CBX3P2-201ENST00000579647 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
CBX3P2-201ENST00000579647 PNPLA7Q6ZV29 1317 aa22.34■■□□□ 1.17
CBX3P2-201ENST00000579647 MSH5O43196 834 aa22.33■■□□□ 1.17
CBX3P2-201ENST00000579647 AMIGO3Q86WK7 504 aa22.32■■□□□ 1.16
CBX3P2-201ENST00000579647 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
CBX3P2-201ENST00000579647 FMNL2Q96PY5 1086 aa22.32■■□□□ 1.16
CBX3P2-201ENST00000579647 ZNF831Q5JPB2 1677 aa22.32■■□□□ 1.16
CBX3P2-201ENST00000579647 GNPATO15228 680 aa22.31■■□□□ 1.16
CBX3P2-201ENST00000579647 PHF14O94880 888 aa22.31■■□□□ 1.16
CBX3P2-201ENST00000579647 ZBTB7AO95365 584 aa22.31■■□□□ 1.16
CBX3P2-201ENST00000579647 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
CBX3P2-201ENST00000579647 RC3H1Q5TC82 1133 aaKnown RBP22.31■■□□□ 1.16
CBX3P2-201ENST00000579647 ATF5Q9Y2D1 282 aaPredicted RBP22.31■■□□□ 1.16
CBX3P2-201ENST00000579647 HEG1Q9ULI3 1381 aa22.3■■□□□ 1.16
CBX3P2-201ENST00000579647 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
CBX3P2-201ENST00000579647 CYP19A1P11511 503 aaPredicted RBP22.3■■□□□ 1.16
CBX3P2-201ENST00000579647 CRKLP46109 303 aaKnown RBP22.3■■□□□ 1.16
CBX3P2-201ENST00000579647 MIER1Q8N108 512 aa22.3■■□□□ 1.16
CBX3P2-201ENST00000579647 UBR2Q8IWV8 1755 aa22.3■■□□□ 1.16
CBX3P2-201ENST00000579647 TJP1Q07157 1748 aa22.29■■□□□ 1.16
CBX3P2-201ENST00000579647 CASZ1Q86V15 1759 aa22.29■■□□□ 1.16
CBX3P2-201ENST00000579647 CCER2I3L3R5 266 aa22.29■■□□□ 1.16
CBX3P2-201ENST00000579647 LAS1LQ9Y4W2 734 aaKnown RBP22.29■■□□□ 1.16
CBX3P2-201ENST00000579647 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
CBX3P2-201ENST00000579647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.28■■□□□ 1.16
CBX3P2-201ENST00000579647 FLAD1Q8NFF5 587 aa22.28■■□□□ 1.16
CBX3P2-201ENST00000579647 RTCBQ9Y3I0 505 aaKnown RBP22.28■■□□□ 1.16
CBX3P2-201ENST00000579647 COL5A3P25940 1745 aaPredicted RBP22.27■■□□□ 1.16
CBX3P2-201ENST00000579647 RPS6KA4O75676 772 aa22.27■■□□□ 1.16
CBX3P2-201ENST00000579647 INTS5Q6P9B9 1019 aaKnown RBP22.27■■□□□ 1.16
CBX3P2-201ENST00000579647 TEX13AQ9BXU3 409 aaPredicted RBP22.27■■□□□ 1.16
CBX3P2-201ENST00000579647 SPON1Q9HCB6 807 aa22.27■■□□□ 1.16
CBX3P2-201ENST00000579647 TSPYL4Q9UJ04 414 aa22.27■■□□□ 1.16
CBX3P2-201ENST00000579647 PRAMEF22A3QJZ6 481 aa22.26■■□□□ 1.15
CBX3P2-201ENST00000579647 SSFA2P28290 1259 aa22.26■■□□□ 1.15
CBX3P2-201ENST00000579647 CCDC87Q9NVE4 849 aa22.26■■□□□ 1.15
CBX3P2-201ENST00000579647 SALL2Q9Y467 1007 aaPredicted RBP22.26■■□□□ 1.15
CBX3P2-201ENST00000579647 QSER1Q2KHR3 1735 aa22.26■■□□□ 1.15
CBX3P2-201ENST00000579647 STARD3NLO95772 234 aa22.25■■□□□ 1.15
CBX3P2-201ENST00000579647 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
CBX3P2-201ENST00000579647 TRAPPC3LQ5T215 181 aa22.25■■□□□ 1.15
CBX3P2-201ENST00000579647 SLC16A10Q8TF71 515 aa22.25■■□□□ 1.15
CBX3P2-201ENST00000579647 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms