RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 RTF1Q92541 710 aaKnown RBP13.29□□□□□ -0.28
MKS1-208ENST00000579358 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
MKS1-208ENST00000579358 ITGB4P16144 1822 aa13.29□□□□□ -0.28
MKS1-208ENST00000579358 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
MKS1-208ENST00000579358 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
MKS1-208ENST00000579358 SIK1P57059 783 aa13.28□□□□□ -0.28
MKS1-208ENST00000579358 TEFQ10587 303 aa13.28□□□□□ -0.28
MKS1-208ENST00000579358 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
MKS1-208ENST00000579358 ADAMTS8Q9UP79 889 aa13.28□□□□□ -0.28
MKS1-208ENST00000579358 PSDA5PKW4 1024 aaPredicted RBP13.27□□□□□ -0.29
MKS1-208ENST00000579358 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
MKS1-208ENST00000579358 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
MKS1-208ENST00000579358 KCNQ4P56696 695 aa13.26□□□□□ -0.29
MKS1-208ENST00000579358 ZNF827Q17R98 1081 aa13.26□□□□□ -0.29
MKS1-208ENST00000579358 CCDC184Q52MB2 194 aa13.26□□□□□ -0.29
MKS1-208ENST00000579358 MRS2Q9HD23 443 aa13.26□□□□□ -0.29
MKS1-208ENST00000579358 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
MKS1-208ENST00000579358 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
MKS1-208ENST00000579358 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
MKS1-208ENST00000579358 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
MKS1-208ENST00000579358 MCM10Q7L590 875 aa13.24□□□□□ -0.29
MKS1-208ENST00000579358 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
MKS1-208ENST00000579358 PNISRQ8TF01 805 aaKnown RBP13.24□□□□□ -0.29
MKS1-208ENST00000579358 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
MKS1-208ENST00000579358 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
MKS1-208ENST00000579358 RIPK4P57078 832 aa13.23□□□□□ -0.29
MKS1-208ENST00000579358 ITPK1Q13572 414 aa13.23□□□□□ -0.29
MKS1-208ENST00000579358 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
MKS1-208ENST00000579358 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
MKS1-208ENST00000579358 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
MKS1-208ENST00000579358 CICQ96RK0 1608 aaPredicted RBP13.23□□□□□ -0.29
MKS1-208ENST00000579358 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
MKS1-208ENST00000579358 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 LINC00116Q8NCU8 138 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
MKS1-208ENST00000579358 C5P01031 1676 aa13.21□□□□□ -0.29
MKS1-208ENST00000579358 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
MKS1-208ENST00000579358 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
MKS1-208ENST00000579358 AK7Q96M32 723 aa13.21□□□□□ -0.29
MKS1-208ENST00000579358 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
MKS1-208ENST00000579358 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
MKS1-208ENST00000579358 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
MKS1-208ENST00000579358 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
MKS1-208ENST00000579358 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
MKS1-208ENST00000579358 SSFA2P28290 1259 aa13.19□□□□□ -0.3
MKS1-208ENST00000579358 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
MKS1-208ENST00000579358 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
MKS1-208ENST00000579358 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
MKS1-208ENST00000579358 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
MKS1-208ENST00000579358 CASZ1Q86V15 1759 aa13.19□□□□□ -0.3
MKS1-208ENST00000579358 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
MKS1-208ENST00000579358 LRP5O75197 1615 aa13.18□□□□□ -0.3
MKS1-208ENST00000579358 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
MKS1-208ENST00000579358 APAF1O14727 1248 aa13.18□□□□□ -0.3
MKS1-208ENST00000579358 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
MKS1-208ENST00000579358 PDGFDQ9GZP0 370 aaPredicted RBP13.18□□□□□ -0.3
MKS1-208ENST00000579358 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
MKS1-208ENST00000579358 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
MKS1-208ENST00000579358 QSER1Q2KHR3 1735 aa13.18□□□□□ -0.3
MKS1-208ENST00000579358 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 GNPATO15228 680 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
MKS1-208ENST00000579358 NEUROD2Q15784 382 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
MKS1-208ENST00000579358 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
MKS1-208ENST00000579358 MTFR1LQ9H019 292 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
MKS1-208ENST00000579358 TJP1Q07157 1748 aa13.16□□□□□ -0.3
MKS1-208ENST00000579358 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
MKS1-208ENST00000579358 KCNQ3O43525 872 aa13.16□□□□□ -0.3
MKS1-208ENST00000579358 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
MKS1-208ENST00000579358 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
MKS1-208ENST00000579358 ADRA2BP18089 450 aa13.16□□□□□ -0.3
MKS1-208ENST00000579358 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
MKS1-208ENST00000579358 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
MKS1-208ENST00000579358 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
MKS1-208ENST00000579358 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
MKS1-208ENST00000579358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
MKS1-208ENST00000579358 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
MKS1-208ENST00000579358 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
MKS1-208ENST00000579358 DLG5Q8TDM6 1919 aa13.15□□□□□ -0.3
MKS1-208ENST00000579358 PHF14O94880 888 aa13.14□□□□□ -0.31
MKS1-208ENST00000579358 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
MKS1-208ENST00000579358 STARD3NLO95772 234 aa13.14□□□□□ -0.31
MKS1-208ENST00000579358 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
MKS1-208ENST00000579358 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
MKS1-208ENST00000579358 CCDC27Q2M243 656 aa13.14□□□□□ -0.31
MKS1-208ENST00000579358 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
MKS1-208ENST00000579358 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
MKS1-208ENST00000579358 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
MKS1-208ENST00000579358 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
MKS1-208ENST00000579358 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
MKS1-208ENST00000579358 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
MKS1-208ENST00000579358 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms