RNA–Protein interactions for RNA: ENST00000579214.1

TTC39C-206, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-206ENST00000579214 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
TTC39C-206ENST00000579214 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
TTC39C-206ENST00000579214 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
TTC39C-206ENST00000579214 IL16Q14005 1332 aa12.62□□□□□ -0.39
TTC39C-206ENST00000579214 ADAMTS7Q9UKP4 1686 aa12.62□□□□□ -0.39
TTC39C-206ENST00000579214 MRC1P22897 1456 aa12.62□□□□□ -0.39
TTC39C-206ENST00000579214 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
TTC39C-206ENST00000579214 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
TTC39C-206ENST00000579214 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
TTC39C-206ENST00000579214 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
TTC39C-206ENST00000579214 NFATC2IPQ8NCF5 419 aa12.62□□□□□ -0.39
TTC39C-206ENST00000579214 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
TTC39C-206ENST00000579214 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
TTC39C-206ENST00000579214 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
TTC39C-206ENST00000579214 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
TTC39C-206ENST00000579214 ITGB4P16144 1822 aa12.6□□□□□ -0.39
TTC39C-206ENST00000579214 SLC39A6Q13433 755 aa12.6□□□□□ -0.39
TTC39C-206ENST00000579214 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
TTC39C-206ENST00000579214 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
TTC39C-206ENST00000579214 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
TTC39C-206ENST00000579214 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
TTC39C-206ENST00000579214 KCNQ2O43526 872 aa12.59□□□□□ -0.39
TTC39C-206ENST00000579214 PIGBQ92521 554 aa12.59□□□□□ -0.39
TTC39C-206ENST00000579214 CHL1O00533 1208 aa12.58□□□□□ -0.4
TTC39C-206ENST00000579214 KCNQ3O43525 872 aa12.58□□□□□ -0.4
TTC39C-206ENST00000579214 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
TTC39C-206ENST00000579214 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
TTC39C-206ENST00000579214 BCL9O00512 1426 aa12.57□□□□□ -0.4
TTC39C-206ENST00000579214 KDM3BQ7LBC6 1761 aa12.57□□□□□ -0.4
TTC39C-206ENST00000579214 TRIM37O94972 964 aa12.57□□□□□ -0.4
TTC39C-206ENST00000579214 CENPBP07199 599 aaPredicted RBP12.57□□□□□ -0.4
TTC39C-206ENST00000579214 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
TTC39C-206ENST00000579214 SBF2Q86WG5 1849 aa12.56□□□□□ -0.4
TTC39C-206ENST00000579214 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
TTC39C-206ENST00000579214 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
TTC39C-206ENST00000579214 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
TTC39C-206ENST00000579214 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
TTC39C-206ENST00000579214 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
TTC39C-206ENST00000579214 BABAM1Q9NWV8 329 aa12.56□□□□□ -0.4
TTC39C-206ENST00000579214 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
TTC39C-206ENST00000579214 BTAF1O14981 1849 aa12.55□□□□□ -0.4
TTC39C-206ENST00000579214 KRT24Q2M2I5 525 aa12.55□□□□□ -0.4
TTC39C-206ENST00000579214 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
TTC39C-206ENST00000579214 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
TTC39C-206ENST00000579214 EIF4A1P60842 406 aaKnown RBP12.54□□□□□ -0.4
TTC39C-206ENST00000579214 SMARCC1Q92922 1105 aaPredicted RBP12.54□□□□□ -0.4
TTC39C-206ENST00000579214 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
TTC39C-206ENST00000579214 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
TTC39C-206ENST00000579214 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
TTC39C-206ENST00000579214 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
TTC39C-206ENST00000579214 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
TTC39C-206ENST00000579214 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
TTC39C-206ENST00000579214 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
TTC39C-206ENST00000579214 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
TTC39C-206ENST00000579214 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
TTC39C-206ENST00000579214 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
TTC39C-206ENST00000579214 TSPYL6Q8N831 410 aa12.52□□□□□ -0.41
TTC39C-206ENST00000579214 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
TTC39C-206ENST00000579214 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
TTC39C-206ENST00000579214 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
TTC39C-206ENST00000579214 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
TTC39C-206ENST00000579214 PRAMEF22A3QJZ6 481 aa12.5□□□□□ -0.41
TTC39C-206ENST00000579214 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
TTC39C-206ENST00000579214 APBA3O96018 575 aa12.5□□□□□ -0.41
TTC39C-206ENST00000579214 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
TTC39C-206ENST00000579214 C5P01031 1676 aa12.5□□□□□ -0.41
TTC39C-206ENST00000579214 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
TTC39C-206ENST00000579214 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
TTC39C-206ENST00000579214 SIK1P57059 783 aa12.49□□□□□ -0.41
TTC39C-206ENST00000579214 HDGFL1Q5TGJ6 251 aa12.49□□□□□ -0.41
TTC39C-206ENST00000579214 BCL2L13Q9BXK5 485 aa12.49□□□□□ -0.41
TTC39C-206ENST00000579214 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
TTC39C-206ENST00000579214 GIGYF1O75420 1035 aaPredicted RBP12.48□□□□□ -0.41
TTC39C-206ENST00000579214 ADRA2BP18089 450 aa12.48□□□□□ -0.41
TTC39C-206ENST00000579214 KCNQ4P56696 695 aa12.48□□□□□ -0.41
TTC39C-206ENST00000579214 DNAJC10Q8IXB1 793 aa12.48□□□□□ -0.41
TTC39C-206ENST00000579214 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
TTC39C-206ENST00000579214 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
TTC39C-206ENST00000579214 RCAN3Q9UKA8 241 aa12.48□□□□□ -0.41
TTC39C-206ENST00000579214 VAMP4O75379 141 aa12.47□□□□□ -0.41
TTC39C-206ENST00000579214 HOXB7P09629 217 aa12.47□□□□□ -0.41
TTC39C-206ENST00000579214 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
TTC39C-206ENST00000579214 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
TTC39C-206ENST00000579214 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
TTC39C-206ENST00000579214 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
TTC39C-206ENST00000579214 SOS1Q07889 1333 aaPredicted RBP12.46□□□□□ -0.41
TTC39C-206ENST00000579214 STARD3NLO95772 234 aa12.46□□□□□ -0.41
TTC39C-206ENST00000579214 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
TTC39C-206ENST00000579214 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
TTC39C-206ENST00000579214 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
TTC39C-206ENST00000579214 TJP1Q07157 1748 aa12.45□□□□□ -0.42
TTC39C-206ENST00000579214 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
TTC39C-206ENST00000579214 BAG6P46379 1132 aa12.45□□□□□ -0.42
TTC39C-206ENST00000579214 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
TTC39C-206ENST00000579214 RARSP54136 660 aaKnown RBP12.45□□□□□ -0.42
TTC39C-206ENST00000579214 ITPK1Q13572 414 aa12.45□□□□□ -0.42
TTC39C-206ENST00000579214 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
TTC39C-206ENST00000579214 TEX13AQ9BXU3 409 aaPredicted RBP12.45□□□□□ -0.42
TTC39C-206ENST00000579214 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
TTC39C-206ENST00000579214 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms