RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.71■■□□□ 1.71
SMG8-203ENST00000578922 COL16A1Q07092 1604 aaPredicted RBP25.7■■□□□ 1.7
SMG8-203ENST00000578922 SLC4A2P04920 1241 aa25.7■■□□□ 1.7
SMG8-203ENST00000578922 ARHGAP45Q92619 1136 aa25.69■■□□□ 1.7
SMG8-203ENST00000578922 BCL11AQ9H165 835 aa25.69■■□□□ 1.7
SMG8-203ENST00000578922 COL22A1Q8NFW1 1626 aaPredicted RBP25.68■■□□□ 1.7
SMG8-203ENST00000578922 NUTM2BA6NNL0 878 aaPredicted RBP25.68■■□□□ 1.7
SMG8-203ENST00000578922 NUTM2EB1AL46 878 aaPredicted RBP25.68■■□□□ 1.7
SMG8-203ENST00000578922 NUTM2AQ8IVF1 878 aaPredicted RBP25.68■■□□□ 1.7
SMG8-203ENST00000578922 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
SMG8-203ENST00000578922 KDM2BQ8NHM5 1336 aa25.68■■□□□ 1.7
SMG8-203ENST00000578922 KDM6AO15550 1401 aaPredicted RBP25.67■■□□□ 1.7
SMG8-203ENST00000578922 EIF4A1P60842 406 aaKnown RBP25.67■■□□□ 1.7
SMG8-203ENST00000578922 SKAP1Q86WV1 359 aa25.67■■□□□ 1.7
SMG8-203ENST00000578922 DDX19BQ9UMR2 479 aa25.66■■□□□ 1.7
SMG8-203ENST00000578922 PCDHB15Q9Y5E8 787 aa25.66■■□□□ 1.7
SMG8-203ENST00000578922 IGHDP01880 384 aa25.66■■□□□ 1.7
SMG8-203ENST00000578922 IL2RBP14784 551 aa25.66■■□□□ 1.7
SMG8-203ENST00000578922 ZCRB1Q8TBF4 217 aaKnown RBP25.65■■□□□ 1.7
SMG8-203ENST00000578922 API5Q9BZZ5 524 aaKnown RBP25.65■■□□□ 1.7
SMG8-203ENST00000578922 CENPQQ7L2Z9 268 aaPredicted RBP25.65■■□□□ 1.7
SMG8-203ENST00000578922 G2E3Q7L622 706 aa25.65■■□□□ 1.7
SMG8-203ENST00000578922 PKD1L3Q7Z443 1732 aa25.64■■□□□ 1.7
SMG8-203ENST00000578922 STK31Q9BXU1 1019 aa25.64■■□□□ 1.7
SMG8-203ENST00000578922 KDM3BQ7LBC6 1761 aa25.64■■□□□ 1.7
SMG8-203ENST00000578922 CCDC30Q5VVM6 783 aa25.63■■□□□ 1.69
SMG8-203ENST00000578922 NFATC2IPQ8NCF5 419 aa25.63■■□□□ 1.69
SMG8-203ENST00000578922 ABCC4O15439 1325 aa25.63■■□□□ 1.69
SMG8-203ENST00000578922 COL14A1Q05707 1796 aaKnown RBP25.63■■□□□ 1.69
SMG8-203ENST00000578922 EIF2S2P20042 333 aaKnown RBP25.63■■□□□ 1.69
SMG8-203ENST00000578922 SLC52A2Q9HAB3 445 aa25.63■■□□□ 1.69
SMG8-203ENST00000578922 HDGFL1Q5TGJ6 251 aa25.62■■□□□ 1.69
SMG8-203ENST00000578922 PARP4Q9UKK3 1724 aaKnown RBP25.62■■□□□ 1.69
SMG8-203ENST00000578922 SLC39A6Q13433 755 aa25.62■■□□□ 1.69
SMG8-203ENST00000578922 DDX54Q8TDD1 881 aaKnown RBP25.62■■□□□ 1.69
SMG8-203ENST00000578922 DCAF5Q96JK2 942 aa25.62■■□□□ 1.69
SMG8-203ENST00000578922 ADAMTS7Q9UKP4 1686 aa25.61■■□□□ 1.69
SMG8-203ENST00000578922 SCN11AQ9UI33 1791 aa25.61■■□□□ 1.69
SMG8-203ENST00000578922 AAMPQ13685 434 aa25.61■■□□□ 1.69
SMG8-203ENST00000578922 PCDH11XQ9BZA7 1347 aa25.6■■□□□ 1.69
SMG8-203ENST00000578922 PCDH11YQ9BZA8 1340 aa25.6■■□□□ 1.69
SMG8-203ENST00000578922 PLEKHG2Q9H7P9 1386 aa25.6■■□□□ 1.69
SMG8-203ENST00000578922 SIPA1L3O60292 1781 aaPredicted RBP25.58■■□□□ 1.69
SMG8-203ENST00000578922 HSP90AB1P08238 724 aaKnown RBP25.58■■□□□ 1.69
SMG8-203ENST00000578922 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
SMG8-203ENST00000578922 PTPRCP08575 1304 aa25.58■■□□□ 1.69
SMG8-203ENST00000578922 RGS12O14924 1447 aa25.58■■□□□ 1.69
SMG8-203ENST00000578922 PRAMEF22A3QJZ6 481 aa25.57■■□□□ 1.68
SMG8-203ENST00000578922 DEKP35659 375 aaKnown RBP25.57■■□□□ 1.68
SMG8-203ENST00000578922 SOS1Q07889 1333 aaPredicted RBP25.57■■□□□ 1.68
SMG8-203ENST00000578922 F6X3S4 739 aa25.56■■□□□ 1.68
SMG8-203ENST00000578922 CABP4P57796 275 aa25.56■■□□□ 1.68
SMG8-203ENST00000578922 NBR1Q14596 966 aa25.56■■□□□ 1.68
SMG8-203ENST00000578922 ZBTB7BO15156 539 aaPredicted RBP25.55■■□□□ 1.68
SMG8-203ENST00000578922 FLIIQ13045 1269 aa25.55■■□□□ 1.68
SMG8-203ENST00000578922 ZNF790Q6PG37 636 aa25.55■■□□□ 1.68
SMG8-203ENST00000578922 CERKQ8TCT0 537 aa25.55■■□□□ 1.68
SMG8-203ENST00000578922 SLC4A10Q6U841 1118 aa25.55■■□□□ 1.68
SMG8-203ENST00000578922 C1orf115Q9H7X2 142 aa25.55■■□□□ 1.68
SMG8-203ENST00000578922 FKBP5Q13451 457 aaPredicted RBP25.54■■□□□ 1.68
SMG8-203ENST00000578922 GIGYF1O75420 1035 aaPredicted RBP25.54■■□□□ 1.68
SMG8-203ENST00000578922 NPM2Q86SE8 214 aaKnown RBP25.54■■□□□ 1.68
SMG8-203ENST00000578922 CHPF2Q9P2E5 772 aa25.54■■□□□ 1.68
SMG8-203ENST00000578922 ANXA1P04083 346 aa25.53■■□□□ 1.68
SMG8-203ENST00000578922 RTL5Q5HYW3 569 aaPredicted RBP25.53■■□□□ 1.68
SMG8-203ENST00000578922 DDRGK1Q96HY6 314 aa25.53■■□□□ 1.68
SMG8-203ENST00000578922 PHAXQ9H814 394 aaKnown RBP25.53■■□□□ 1.68
SMG8-203ENST00000578922 HOXB7P09629 217 aa25.52■■□□□ 1.68
SMG8-203ENST00000578922 PLCH1Q4KWH8 1693 aa25.52■■□□□ 1.68
SMG8-203ENST00000578922 RWDD1Q9H446 243 aaPredicted RBP25.52■■□□□ 1.68
SMG8-203ENST00000578922 INTS3Q68E01 1043 aaKnown RBP25.51■■□□□ 1.67
SMG8-203ENST00000578922 SHANK3Q9BYB0 1731 aa25.5■■□□□ 1.67
SMG8-203ENST00000578922 TTC5Q8N0Z6 440 aa25.5■■□□□ 1.67
SMG8-203ENST00000578922 MRC1P22897 1456 aa25.5■■□□□ 1.67
SMG8-203ENST00000578922 HEG1Q9ULI3 1381 aa25.49■■□□□ 1.67
SMG8-203ENST00000578922 ZNF496Q96IT1 587 aaPredicted RBP25.49■■□□□ 1.67
SMG8-203ENST00000578922 RGS3P49796 1198 aa25.47■■□□□ 1.67
SMG8-203ENST00000578922 NKX1-1Q15270 411 aaPredicted RBP25.47■■□□□ 1.67
SMG8-203ENST00000578922 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
SMG8-203ENST00000578922 CCDC9Q9Y3X0 531 aaKnown RBP25.46■■□□□ 1.67
SMG8-203ENST00000578922 PROSER3Q2NL68 480 aa25.46■■□□□ 1.67
SMG8-203ENST00000578922 DISP2A7MBM2 1401 aa25.45■■□□□ 1.67
SMG8-203ENST00000578922 C8orf37Q96NL8 207 aa25.45■■□□□ 1.67
SMG8-203ENST00000578922 JCADQ9P266 1359 aa25.45■■□□□ 1.66
SMG8-203ENST00000578922 ERVV-2B6SEH9 535 aa25.45■■□□□ 1.66
SMG8-203ENST00000578922 CACNA1FO60840 1977 aa25.44■■□□□ 1.66
SMG8-203ENST00000578922 CHMP4AQ9BY43 222 aa25.44■■□□□ 1.66
SMG8-203ENST00000578922 DBF4Q9UBU7 674 aaPredicted RBP25.44■■□□□ 1.66
SMG8-203ENST00000578922 HDAC1Q13547 482 aaPredicted RBP25.44■■□□□ 1.66
SMG8-203ENST00000578922 MEIS3Q99687 375 aa25.43■■□□□ 1.66
SMG8-203ENST00000578922 NRAPQ86VF7 1730 aa25.43■■□□□ 1.66
SMG8-203ENST00000578922 SPATA31A1Q5TZJ5 1347 aa25.43■■□□□ 1.66
SMG8-203ENST00000578922 CCT4P50991 539 aaKnown RBP25.42■■□□□ 1.66
SMG8-203ENST00000578922 FMNL2Q96PY5 1086 aa25.42■■□□□ 1.66
SMG8-203ENST00000578922 EXOC5O00471 708 aa25.42■■□□□ 1.66
SMG8-203ENST00000578922 C5P01031 1676 aa25.41■■□□□ 1.66
SMG8-203ENST00000578922 FAM161AQ3B820 660 aa25.41■■□□□ 1.66
SMG8-203ENST00000578922 NGLY1Q96IV0 654 aa25.41■■□□□ 1.66
SMG8-203ENST00000578922 USP16Q9Y5T5 823 aa25.4■■□□□ 1.66
SMG8-203ENST00000578922 SNRPA1P09661 255 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms