RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SALL2Q9Y467 1007 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-210ENST00000578733 PAPPAQ13219 1627 aa14.73□□□□□ -0.05
CDK5RAP3-210ENST00000578733 CEMIPQ8WUJ3 1361 aa14.73□□□□□ -0.05
CDK5RAP3-210ENST00000578733 EZH2Q15910 746 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-210ENST00000578733 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
CDK5RAP3-210ENST00000578733 RGPD3A6NKT7 1758 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 RGPD4Q7Z3J3 1758 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 WDR63Q8IWG1 891 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 WWC1Q8IX03 1113 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 IL17REQ8NFR9 667 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 ACSBG1Q96GR2 724 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 CAMKK2Q96RR4 588 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
CDK5RAP3-210ENST00000578733 UBR2Q8IWV8 1755 aa14.7□□□□□ -0.06
CDK5RAP3-210ENST00000578733 DCTN1Q14203 1278 aa14.7□□□□□ -0.06
CDK5RAP3-210ENST00000578733 FAM182BQ5T319 152 aa14.7□□□□□ -0.06
CDK5RAP3-210ENST00000578733 LGR6Q9HBX8 967 aa14.7□□□□□ -0.06
CDK5RAP3-210ENST00000578733 LY75O60449 1722 aa14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 IL16Q14005 1332 aa14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 PRIM1P49642 420 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 GNAI1P63096 354 aa14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 NBPF14Q5TI25 921 aa14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 TTC5Q8N0Z6 440 aa14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 BCL11BQ9C0K0 894 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 BABAM1Q9NWV8 329 aa14.69□□□□□ -0.06
CDK5RAP3-210ENST00000578733 ZBED9Q6R2W3 1325 aa14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 RREB1Q92766 1687 aa14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 BTBD11A6QL63 1104 aa14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 TRIM37O94972 964 aa14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 NFATC2IPQ8NCF5 419 aa14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 SMARCC1Q92922 1105 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 IFT57Q9NWB7 429 aa14.68□□□□□ -0.06
CDK5RAP3-210ENST00000578733 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
CDK5RAP3-210ENST00000578733 APBA3O96018 575 aa14.67□□□□□ -0.06
CDK5RAP3-210ENST00000578733 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
CDK5RAP3-210ENST00000578733 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-210ENST00000578733 ZNF831Q5JPB2 1677 aa14.67□□□□□ -0.06
CDK5RAP3-210ENST00000578733 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 HMGB2P26583 209 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 PPP1R1BQ9UD71 204 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-210ENST00000578733 CACNA1FO60840 1977 aa14.65□□□□□ -0.06
CDK5RAP3-210ENST00000578733 PIGBQ92521 554 aa14.65□□□□□ -0.06
CDK5RAP3-210ENST00000578733 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
CDK5RAP3-210ENST00000578733 NUP188Q5SRE5 1749 aa14.65□□□□□ -0.06
CDK5RAP3-210ENST00000578733 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
CDK5RAP3-210ENST00000578733 TAF1LQ8IZX4 1826 aa14.64□□□□□ -0.07
CDK5RAP3-210ENST00000578733 E9PSI1 815 aa14.64□□□□□ -0.07
CDK5RAP3-210ENST00000578733 KCNQ2O43526 872 aa14.64□□□□□ -0.07
CDK5RAP3-210ENST00000578733 SPON1Q9HCB6 807 aa14.64□□□□□ -0.07
CDK5RAP3-210ENST00000578733 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-210ENST00000578733 ZNF790Q6PG37 636 aa14.63□□□□□ -0.07
CDK5RAP3-210ENST00000578733 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
CDK5RAP3-210ENST00000578733 C5P01031 1676 aa14.62□□□□□ -0.07
CDK5RAP3-210ENST00000578733 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
CDK5RAP3-210ENST00000578733 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-210ENST00000578733 CHL1O00533 1208 aa14.61□□□□□ -0.07
CDK5RAP3-210ENST00000578733 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
CDK5RAP3-210ENST00000578733 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
CDK5RAP3-210ENST00000578733 TJP1Q07157 1748 aa14.61□□□□□ -0.07
CDK5RAP3-210ENST00000578733 ZNF853P0CG23 659 aa14.6□□□□□ -0.07
CDK5RAP3-210ENST00000578733 MBIPQ9NS73 344 aa14.6□□□□□ -0.07
CDK5RAP3-210ENST00000578733 ATG3Q9NT62 314 aa14.6□□□□□ -0.07
CDK5RAP3-210ENST00000578733 PLSCR1O15162 318 aa14.59□□□□□ -0.07
CDK5RAP3-210ENST00000578733 SLC39A6Q13433 755 aa14.59□□□□□ -0.07
CDK5RAP3-210ENST00000578733 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
CDK5RAP3-210ENST00000578733 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-210ENST00000578733 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
CDK5RAP3-210ENST00000578733 ASAP1Q9ULH1 1129 aa14.59□□□□□ -0.07
CDK5RAP3-210ENST00000578733 SLFN5Q08AF3 891 aa14.58□□□□□ -0.08
CDK5RAP3-210ENST00000578733 SLC27A3Q5K4L6 730 aa14.58□□□□□ -0.08
CDK5RAP3-210ENST00000578733 TEX13AQ9BXU3 409 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-210ENST00000578733 SOS1Q07889 1333 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-210ENST00000578733 FANCIQ9NVI1 1328 aa14.58□□□□□ -0.08
CDK5RAP3-210ENST00000578733 HEG1Q9ULI3 1381 aa14.58□□□□□ -0.08
CDK5RAP3-210ENST00000578733 PTCD1O75127 700 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-210ENST00000578733 EIF4A1P60842 406 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-210ENST00000578733 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-210ENST00000578733 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 HOXB7P09629 217 aa14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 SNRPA1P09661 255 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 ATP6V1AP38606 617 aa14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 SIK1P57059 783 aa14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 PTF1AQ7RTS3 328 aa14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 TSR2Q969E8 191 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 CCNL1Q9UK58 526 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-210ENST00000578733 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-210ENST00000578733 C4BP0C0L5 1744 aa14.55□□□□□ -0.08
CDK5RAP3-210ENST00000578733 KCNQ3O43525 872 aa14.54□□□□□ -0.08
CDK5RAP3-210ENST00000578733 STARD3NLO95772 234 aa14.54□□□□□ -0.08
CDK5RAP3-210ENST00000578733 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
CDK5RAP3-210ENST00000578733 CT47B1P0C2W7 299 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-210ENST00000578733 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-210ENST00000578733 TXNRD1Q16881 649 aa14.53□□□□□ -0.08
CDK5RAP3-210ENST00000578733 TWISTNBQ3B726 338 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms