RNA–Protein interactions for RNA: ENST00000578694.1

RAB11FIP4-203, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 5

Gene RAB11FIP4, Length 487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-203ENST00000578694 NFATC2IPQ8NCF5 419 aa28.34■■■□□ 2.13
RAB11FIP4-203ENST00000578694 TAF1LQ8IZX4 1826 aa28.34■■■□□ 2.13
RAB11FIP4-203ENST00000578694 LOC102724428A0A0B4J2F2 783 aa28.32■■■□□ 2.12
RAB11FIP4-203ENST00000578694 SIK1P57059 783 aa28.32■■■□□ 2.12
RAB11FIP4-203ENST00000578694 QSER1Q2KHR3 1735 aa28.32■■■□□ 2.12
RAB11FIP4-203ENST00000578694 GNAT3A8MTJ3 354 aa28.31■■■□□ 2.12
RAB11FIP4-203ENST00000578694 PDGFDQ9GZP0 370 aaPredicted RBP28.31■■■□□ 2.12
RAB11FIP4-203ENST00000578694 SLC52A2Q9HAB3 445 aa28.31■■■□□ 2.12
RAB11FIP4-203ENST00000578694 TUBGCP6Q96RT7 1819 aa28.3■■■□□ 2.12
RAB11FIP4-203ENST00000578694 ZNF831Q5JPB2 1677 aa28.29■■■□□ 2.12
RAB11FIP4-203ENST00000578694 PLEKHF1Q96S99 279 aa28.28■■■□□ 2.12
RAB11FIP4-203ENST00000578694 C4BP0C0L5 1744 aa28.28■■■□□ 2.12
RAB11FIP4-203ENST00000578694 HMGB2P26583 209 aaKnown RBP28.27■■■□□ 2.12
RAB11FIP4-203ENST00000578694 IL17REQ8NFR9 667 aa28.27■■■□□ 2.12
RAB11FIP4-203ENST00000578694 TFCP2L1Q9NZI6 479 aa28.26■■■□□ 2.11
RAB11FIP4-203ENST00000578694 ATP6V1AP38606 617 aa28.25■■■□□ 2.11
RAB11FIP4-203ENST00000578694 ITPK1Q13572 414 aa28.25■■■□□ 2.11
RAB11FIP4-203ENST00000578694 SLC4A9Q96Q91 983 aa28.25■■■□□ 2.11
RAB11FIP4-203ENST00000578694 SPON1Q9HCB6 807 aa28.25■■■□□ 2.11
RAB11FIP4-203ENST00000578694 CEMIPQ8WUJ3 1361 aa28.24■■■□□ 2.11
RAB11FIP4-203ENST00000578694 PNPLA7Q6ZV29 1317 aa28.24■■■□□ 2.11
RAB11FIP4-203ENST00000578694 LINC00116Q8NCU8 138 aa28.24■■■□□ 2.11
RAB11FIP4-203ENST00000578694 RBM42Q9BTD8 480 aaKnown RBP28.24■■■□□ 2.11
RAB11FIP4-203ENST00000578694 SIPA1L3O60292 1781 aaPredicted RBP28.24■■■□□ 2.11
RAB11FIP4-203ENST00000578694 NEFMP07197 916 aa28.23■■■□□ 2.11
RAB11FIP4-203ENST00000578694 PNNQ9H307 717 aaKnown RBP28.23■■■□□ 2.11
RAB11FIP4-203ENST00000578694 CICQ96RK0 1608 aaPredicted RBP28.21■■■□□ 2.11
RAB11FIP4-203ENST00000578694 PTCD1O75127 700 aaKnown RBP28.21■■■□□ 2.11
RAB11FIP4-203ENST00000578694 ZBTB7AO95365 584 aa28.21■■■□□ 2.11
RAB11FIP4-203ENST00000578694 TEFQ10587 303 aa28.21■■■□□ 2.11
RAB11FIP4-203ENST00000578694 COL5A3P25940 1745 aaPredicted RBP28.21■■■□□ 2.11
RAB11FIP4-203ENST00000578694 MAPK8IP3Q9UPT6 1336 aa28.19■■■□□ 2.1
RAB11FIP4-203ENST00000578694 KCPQ6ZWJ8 1503 aa28.19■■■□□ 2.1
RAB11FIP4-203ENST00000578694 TJP1Q07157 1748 aa28.19■■■□□ 2.1
RAB11FIP4-203ENST00000578694 SLC39A6Q13433 755 aa28.19■■■□□ 2.1
RAB11FIP4-203ENST00000578694 RTF1Q92541 710 aaKnown RBP28.19■■■□□ 2.1
RAB11FIP4-203ENST00000578694 DLG5Q8TDM6 1919 aa28.18■■■□□ 2.1
RAB11FIP4-203ENST00000578694 HTATSF1O43719 755 aaKnown RBP28.18■■■□□ 2.1
RAB11FIP4-203ENST00000578694 AK7Q96M32 723 aa28.18■■■□□ 2.1
RAB11FIP4-203ENST00000578694 UBR2Q8IWV8 1755 aa28.18■■■□□ 2.1
RAB11FIP4-203ENST00000578694 UBR3Q6ZT12 1888 aa28.17■■■□□ 2.1
RAB11FIP4-203ENST00000578694 WDR43Q15061 677 aaKnown RBP eCLIP28.17■■■□□ 2.1
RAB11FIP4-203ENST00000578694 NFE2L2Q16236 605 aa28.17■■■□□ 2.1
RAB11FIP4-203ENST00000578694 MCM10Q7L590 875 aa28.17■■■□□ 2.1
RAB11FIP4-203ENST00000578694 MTFR1LQ9H019 292 aa28.17■■■□□ 2.1
RAB11FIP4-203ENST00000578694 PPP1R1BQ9UD71 204 aaPredicted RBP28.16■■■□□ 2.1
RAB11FIP4-203ENST00000578694 ANP32CO43423 234 aa28.15■■■□□ 2.1
RAB11FIP4-203ENST00000578694 DCTN1Q14203 1278 aa28.15■■■□□ 2.1
RAB11FIP4-203ENST00000578694 AMIGO3Q86WK7 504 aa28.14■■■□□ 2.1
RAB11FIP4-203ENST00000578694 COL23A1Q86Y22 540 aaPredicted RBP28.14■■■□□ 2.1
RAB11FIP4-203ENST00000578694 ATF5Q9Y2D1 282 aaPredicted RBP28.14■■■□□ 2.1
RAB11FIP4-203ENST00000578694 SLC16A10Q8TF71 515 aa28.13■■■□□ 2.09
RAB11FIP4-203ENST00000578694 ADAMTS8Q9UP79 889 aa28.13■■■□□ 2.09
RAB11FIP4-203ENST00000578694 PTGER2P43116 358 aa28.12■■■□□ 2.09
RAB11FIP4-203ENST00000578694 FLAD1Q8NFF5 587 aa28.12■■■□□ 2.09
RAB11FIP4-203ENST00000578694 CNTNAP4Q9C0A0 1308 aa28.12■■■□□ 2.09
RAB11FIP4-203ENST00000578694 GNPATO15228 680 aa28.11■■■□□ 2.09
RAB11FIP4-203ENST00000578694 ZNF790Q6PG37 636 aa28.11■■■□□ 2.09
RAB11FIP4-203ENST00000578694 TTC5Q8N0Z6 440 aa28.11■■■□□ 2.09
RAB11FIP4-203ENST00000578694 COL24A1Q17RW2 1714 aa28.1■■■□□ 2.09
RAB11FIP4-203ENST00000578694 SSFA2P28290 1259 aa28.1■■■□□ 2.09
RAB11FIP4-203ENST00000578694 CCDC184Q52MB2 194 aa28.1■■■□□ 2.09
RAB11FIP4-203ENST00000578694 RC3H1Q5TC82 1133 aaKnown RBP28.1■■■□□ 2.09
RAB11FIP4-203ENST00000578694 SMIM5Q71RC9 77 aa28.1■■■□□ 2.09
RAB11FIP4-203ENST00000578694 CCDC146Q8IYE0 955 aa28.1■■■□□ 2.09
RAB11FIP4-203ENST00000578694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.09■■■□□ 2.09
RAB11FIP4-203ENST00000578694 BTBD11A6QL63 1104 aa28.09■■■□□ 2.09
RAB11FIP4-203ENST00000578694 MSH5O43196 834 aa28.09■■■□□ 2.09
RAB11FIP4-203ENST00000578694 PHF14O94880 888 aa28.09■■■□□ 2.09
RAB11FIP4-203ENST00000578694 SGIP1Q9BQI5 828 aa28.09■■■□□ 2.09
RAB11FIP4-203ENST00000578694 DNAJC10Q8IXB1 793 aa28.08■■■□□ 2.09
RAB11FIP4-203ENST00000578694 VSIG10Q8N0Z9 540 aa28.08■■■□□ 2.09
RAB11FIP4-203ENST00000578694 RUNDC1Q96C34 613 aa28.08■■■□□ 2.09
RAB11FIP4-203ENST00000578694 MYH14Q7Z406 1995 aaKnown RBP28.06■■■□□ 2.08
RAB11FIP4-203ENST00000578694 TMPOP42166 694 aaKnown RBP28.06■■■□□ 2.08
RAB11FIP4-203ENST00000578694 CRKLP46109 303 aaKnown RBP28.06■■■□□ 2.08
RAB11FIP4-203ENST00000578694 ZNF496Q96IT1 587 aaPredicted RBP28.06■■■□□ 2.08
RAB11FIP4-203ENST00000578694 HEG1Q9ULI3 1381 aa28.05■■■□□ 2.08
RAB11FIP4-203ENST00000578694 RTCBQ9Y3I0 505 aaKnown RBP28.05■■■□□ 2.08
RAB11FIP4-203ENST00000578694 KCNQ3O43525 872 aa28.04■■■□□ 2.08
RAB11FIP4-203ENST00000578694 RIPK4P57078 832 aa28.04■■■□□ 2.08
RAB11FIP4-203ENST00000578694 THUMPD2Q9BTF0 503 aaKnown RBP28.04■■■□□ 2.08
RAB11FIP4-203ENST00000578694 RPS6KA4O75676 772 aa28.03■■■□□ 2.08
RAB11FIP4-203ENST00000578694 TAF7Q15545 349 aaPredicted RBP28.03■■■□□ 2.08
RAB11FIP4-203ENST00000578694 FMNL2Q96PY5 1086 aa28.03■■■□□ 2.08
RAB11FIP4-203ENST00000578694 CYP19A1P11511 503 aaPredicted RBP28.02■■■□□ 2.08
RAB11FIP4-203ENST00000578694 INTS5Q6P9B9 1019 aaKnown RBP28.02■■■□□ 2.08
RAB11FIP4-203ENST00000578694 RRP7AQ9Y3A4 280 aaKnown RBP28.02■■■□□ 2.08
RAB11FIP4-203ENST00000578694 ADRA2BP18089 450 aa28■■■□□ 2.07
RAB11FIP4-203ENST00000578694 MSL1Q68DK7 614 aa28■■■□□ 2.07
RAB11FIP4-203ENST00000578694 MRS2Q9HD23 443 aa28■■■□□ 2.07
RAB11FIP4-203ENST00000578694 CCDC87Q9NVE4 849 aa28■■■□□ 2.07
RAB11FIP4-203ENST00000578694 KDM3BQ7LBC6 1761 aa28■■■□□ 2.07
RAB11FIP4-203ENST00000578694 C4AP0C0L4 1744 aa28■■■□□ 2.07
RAB11FIP4-203ENST00000578694 LMOD3Q0VAK6 560 aa27.99■■■□□ 2.07
RAB11FIP4-203ENST00000578694 TRAPPC3LQ5T215 181 aa27.99■■■□□ 2.07
RAB11FIP4-203ENST00000578694 POLD1P28340 1107 aa27.98■■■□□ 2.07
RAB11FIP4-203ENST00000578694 NEUROD2Q15784 382 aa27.98■■■□□ 2.07
RAB11FIP4-203ENST00000578694 ARHGEF1Q92888 912 aaKnown RBP27.98■■■□□ 2.07
RAB11FIP4-203ENST00000578694 MIS18AQ9NYP9 233 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms