RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
SKA2-204ENST00000578519 SMC5Q8IY18 1101 aa13.97□□□□□ -0.17
SKA2-204ENST00000578519 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
SKA2-204ENST00000578519 PXDNQ92626 1479 aa13.97□□□□□ -0.17
SKA2-204ENST00000578519 STRCQ7RTU9 1775 aa13.96□□□□□ -0.17
SKA2-204ENST00000578519 HMMRO75330 724 aa13.96□□□□□ -0.17
SKA2-204ENST00000578519 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
SKA2-204ENST00000578519 UPF2Q9HAU5 1272 aaKnown RBP13.96□□□□□ -0.17
SKA2-204ENST00000578519 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
SKA2-204ENST00000578519 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
SKA2-204ENST00000578519 GNAI3P08754 354 aa13.95□□□□□ -0.18
SKA2-204ENST00000578519 HDGFL1Q5TGJ6 251 aa13.95□□□□□ -0.18
SKA2-204ENST00000578519 PRDM11Q9NQV5 511 aa13.95□□□□□ -0.18
SKA2-204ENST00000578519 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
SKA2-204ENST00000578519 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
SKA2-204ENST00000578519 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
SKA2-204ENST00000578519 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
SKA2-204ENST00000578519 KRT24Q2M2I5 525 aa13.93□□□□□ -0.18
SKA2-204ENST00000578519 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
SKA2-204ENST00000578519 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
SKA2-204ENST00000578519 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
SKA2-204ENST00000578519 IPO9Q96P70 1041 aaKnown RBP13.93□□□□□ -0.18
SKA2-204ENST00000578519 CAMTA1Q9Y6Y1 1673 aa13.92□□□□□ -0.18
SKA2-204ENST00000578519 NUCB1Q02818 461 aa13.92□□□□□ -0.18
SKA2-204ENST00000578519 FLIIQ13045 1269 aa13.92□□□□□ -0.18
SKA2-204ENST00000578519 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
SKA2-204ENST00000578519 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
SKA2-204ENST00000578519 FAM208AQ9UK61 1670 aaKnown RBP13.91□□□□□ -0.18
SKA2-204ENST00000578519 EVA1CP58658 441 aa13.91□□□□□ -0.18
SKA2-204ENST00000578519 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
SKA2-204ENST00000578519 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
SKA2-204ENST00000578519 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
SKA2-204ENST00000578519 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
SKA2-204ENST00000578519 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
SKA2-204ENST00000578519 GNAI2P04899 355 aa13.9□□□□□ -0.18
SKA2-204ENST00000578519 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
SKA2-204ENST00000578519 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
SKA2-204ENST00000578519 CHD1LQ86WJ1 897 aa13.9□□□□□ -0.18
SKA2-204ENST00000578519 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
SKA2-204ENST00000578519 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.19
SKA2-204ENST00000578519 DDX58O95786 925 aaKnown RBP13.89□□□□□ -0.19
SKA2-204ENST00000578519 PHKG2P15735 406 aa13.89□□□□□ -0.19
SKA2-204ENST00000578519 CHRNA2Q15822 529 aa13.89□□□□□ -0.19
SKA2-204ENST00000578519 ANKRD45Q5TZF3 282 aa13.89□□□□□ -0.19
SKA2-204ENST00000578519 EIF2S2P20042 333 aaKnown RBP13.88□□□□□ -0.19
SKA2-204ENST00000578519 C8orf34Q49A92 452 aa13.88□□□□□ -0.19
SKA2-204ENST00000578519 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
SKA2-204ENST00000578519 TTC5Q8N0Z6 440 aa13.88□□□□□ -0.19
SKA2-204ENST00000578519 CARD10Q9BWT7 1032 aa13.88□□□□□ -0.19
SKA2-204ENST00000578519 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
SKA2-204ENST00000578519 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
SKA2-204ENST00000578519 HYPKQ9NX55 129 aa13.88□□□□□ -0.19
SKA2-204ENST00000578519 XIRP1Q702N8 1843 aaKnown RBP13.87□□□□□ -0.19
SKA2-204ENST00000578519 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
SKA2-204ENST00000578519 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
SKA2-204ENST00000578519 CABP4P57796 275 aa13.86□□□□□ -0.19
SKA2-204ENST00000578519 G2E3Q7L622 706 aa13.86□□□□□ -0.19
SKA2-204ENST00000578519 SRCIN1Q9C0H9 1055 aa13.86□□□□□ -0.19
SKA2-204ENST00000578519 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
SKA2-204ENST00000578519 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
SKA2-204ENST00000578519 CACNA1FO60840 1977 aa13.85□□□□□ -0.19
SKA2-204ENST00000578519 RGS12O14924 1447 aa13.85□□□□□ -0.19
SKA2-204ENST00000578519 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
SKA2-204ENST00000578519 IL2RBP14784 551 aa13.85□□□□□ -0.19
SKA2-204ENST00000578519 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
SKA2-204ENST00000578519 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
SKA2-204ENST00000578519 COL18A1P39060 1754 aa13.85□□□□□ -0.19
SKA2-204ENST00000578519 ERVV-2B6SEH9 535 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 UBTFL1P0CB47 393 aaPredicted RBP13.84□□□□□ -0.19
SKA2-204ENST00000578519 CEP85Q6P2H3 762 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 SKAP1Q86WV1 359 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 FMNL2Q96PY5 1086 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
SKA2-204ENST00000578519 F6X3S4 739 aa13.83□□□□□ -0.2
SKA2-204ENST00000578519 ALDH1L1O75891 902 aa13.83□□□□□ -0.2
SKA2-204ENST00000578519 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
SKA2-204ENST00000578519 MEIS3Q99687 375 aa13.83□□□□□ -0.2
SKA2-204ENST00000578519 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
SKA2-204ENST00000578519 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
SKA2-204ENST00000578519 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.2
SKA2-204ENST00000578519 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
SKA2-204ENST00000578519 ATP8B2P98198 1209 aa13.82□□□□□ -0.2
SKA2-204ENST00000578519 BMP2KLQ5H9B9 411 aa13.82□□□□□ -0.2
SKA2-204ENST00000578519 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
SKA2-204ENST00000578519 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 BECN1Q14457 450 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 CRYBG1Q9Y4K1 1723 aa13.81□□□□□ -0.2
SKA2-204ENST00000578519 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 KCNQ3O43525 872 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 TOM1O60784 492 aa13.8□□□□□ -0.2
SKA2-204ENST00000578519 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
SKA2-204ENST00000578519 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
SKA2-204ENST00000578519 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms