RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
SMURF2-203ENST00000578386 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
SMURF2-203ENST00000578386 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
SMURF2-203ENST00000578386 FLIIQ13045 1269 aa13.02□□□□□ -0.32
SMURF2-203ENST00000578386 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.32
SMURF2-203ENST00000578386 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
SMURF2-203ENST00000578386 STRN4Q9NRL3 753 aa13.02□□□□□ -0.33
SMURF2-203ENST00000578386 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
SMURF2-203ENST00000578386 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
SMURF2-203ENST00000578386 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
SMURF2-203ENST00000578386 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
SMURF2-203ENST00000578386 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
SMURF2-203ENST00000578386 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
SMURF2-203ENST00000578386 FAM208AQ9UK61 1670 aaKnown RBP13□□□□□ -0.33
SMURF2-203ENST00000578386 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
SMURF2-203ENST00000578386 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
SMURF2-203ENST00000578386 NFATC2IPQ8NCF5 419 aa12.99□□□□□ -0.33
SMURF2-203ENST00000578386 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
SMURF2-203ENST00000578386 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
SMURF2-203ENST00000578386 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
SMURF2-203ENST00000578386 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
SMURF2-203ENST00000578386 MEGF6O75095 1541 aa12.99□□□□□ -0.33
SMURF2-203ENST00000578386 PTPRCP08575 1304 aa12.98□□□□□ -0.33
SMURF2-203ENST00000578386 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
SMURF2-203ENST00000578386 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
SMURF2-203ENST00000578386 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
SMURF2-203ENST00000578386 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
SMURF2-203ENST00000578386 ABCA3Q99758 1704 aa12.97□□□□□ -0.33
SMURF2-203ENST00000578386 CYP27B1O15528 508 aa12.97□□□□□ -0.33
SMURF2-203ENST00000578386 NUCB1Q02818 461 aa12.97□□□□□ -0.33
SMURF2-203ENST00000578386 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
SMURF2-203ENST00000578386 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
SMURF2-203ENST00000578386 CEP85Q6P2H3 762 aa12.96□□□□□ -0.33
SMURF2-203ENST00000578386 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
SMURF2-203ENST00000578386 PHKG2P15735 406 aa12.96□□□□□ -0.34
SMURF2-203ENST00000578386 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.34
SMURF2-203ENST00000578386 OTUD7AQ8TE49 926 aaPredicted RBP12.96□□□□□ -0.34
SMURF2-203ENST00000578386 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
SMURF2-203ENST00000578386 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
SMURF2-203ENST00000578386 PI4KAP2A4QPH2 592 aa12.95□□□□□ -0.34
SMURF2-203ENST00000578386 PI4KAP1Q8N8J0 262 aa12.95□□□□□ -0.34
SMURF2-203ENST00000578386 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
SMURF2-203ENST00000578386 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
SMURF2-203ENST00000578386 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
SMURF2-203ENST00000578386 ABCC6O95255 1503 aa12.94□□□□□ -0.34
SMURF2-203ENST00000578386 CPDO75976 1380 aa12.94□□□□□ -0.34
SMURF2-203ENST00000578386 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
SMURF2-203ENST00000578386 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
SMURF2-203ENST00000578386 ATP10DQ9P241 1426 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
SMURF2-203ENST00000578386 MYL6BP14649 208 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 EVA1CP58658 441 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 ANKRD44Q8N8A2 993 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
SMURF2-203ENST00000578386 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 EXOC6BQ9Y2D4 811 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 NBR1Q14596 966 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 PNMA6EA0A0J9YXQ4 647 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 CCT4P50991 539 aaKnown RBP12.93□□□□□ -0.34
SMURF2-203ENST00000578386 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
SMURF2-203ENST00000578386 LRRFIP2Q9Y608 721 aaKnown RBP12.93□□□□□ -0.34
SMURF2-203ENST00000578386 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
SMURF2-203ENST00000578386 GCC1Q96CN9 775 aa12.92□□□□□ -0.34
SMURF2-203ENST00000578386 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
SMURF2-203ENST00000578386 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
SMURF2-203ENST00000578386 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
SMURF2-203ENST00000578386 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 USP44Q9H0E7 712 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 NBPF7P0C2Y1 421 aaPredicted RBP12.91□□□□□ -0.34
SMURF2-203ENST00000578386 DCTPP1Q9H773 170 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 CACNA1FO60840 1977 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
SMURF2-203ENST00000578386 GNAI2P04899 355 aa12.9□□□□□ -0.34
SMURF2-203ENST00000578386 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
SMURF2-203ENST00000578386 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
SMURF2-203ENST00000578386 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
SMURF2-203ENST00000578386 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
SMURF2-203ENST00000578386 CABP4P57796 275 aa12.9□□□□□ -0.34
SMURF2-203ENST00000578386 PIP4K2BP78356 416 aa12.9□□□□□ -0.34
SMURF2-203ENST00000578386 RPAP2Q8IXW5 612 aaPredicted RBP12.89□□□□□ -0.35
SMURF2-203ENST00000578386 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
SMURF2-203ENST00000578386 MAP3K2Q9Y2U5 619 aa12.89□□□□□ -0.35
SMURF2-203ENST00000578386 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
SMURF2-203ENST00000578386 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
SMURF2-203ENST00000578386 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
SMURF2-203ENST00000578386 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
SMURF2-203ENST00000578386 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
SMURF2-203ENST00000578386 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
SMURF2-203ENST00000578386 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
SMURF2-203ENST00000578386 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
SMURF2-203ENST00000578386 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
SMURF2-203ENST00000578386 ROBO1Q9Y6N7 1651 aa12.88□□□□□ -0.35
SMURF2-203ENST00000578386 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
SMURF2-203ENST00000578386 ADCY9O60503 1353 aa12.87□□□□□ -0.35
SMURF2-203ENST00000578386 PLEKHM2Q8IWE5 1019 aa12.87□□□□□ -0.35
SMURF2-203ENST00000578386 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
SMURF2-203ENST00000578386 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
SMURF2-203ENST00000578386 N4BP2Q86UW6 1770 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms