RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
SLC46A1-201ENST00000578217 GSE1Q14687 1217 aa11.66□□□□□ -0.54
SLC46A1-201ENST00000578217 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
SLC46A1-201ENST00000578217 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
SLC46A1-201ENST00000578217 N4BP2Q86UW6 1770 aaPredicted RBP11.66□□□□□ -0.54
SLC46A1-201ENST00000578217 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
SLC46A1-201ENST00000578217 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
SLC46A1-201ENST00000578217 CLCN6P51797 869 aa11.65□□□□□ -0.54
SLC46A1-201ENST00000578217 SBNO2Q9Y2G9 1366 aa11.65□□□□□ -0.55
SLC46A1-201ENST00000578217 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
SLC46A1-201ENST00000578217 PHF14O94880 888 aa11.64□□□□□ -0.55
SLC46A1-201ENST00000578217 FBLN1P23142 703 aa11.64□□□□□ -0.55
SLC46A1-201ENST00000578217 USP47Q96K76 1375 aa11.64□□□□□ -0.55
SLC46A1-201ENST00000578217 EVC2Q86UK5 1308 aa11.63□□□□□ -0.55
SLC46A1-201ENST00000578217 HSPA1AP0DMV8 641 aaKnown RBP11.63□□□□□ -0.55
SLC46A1-201ENST00000578217 HSPA1BP0DMV9 641 aaKnown RBP11.63□□□□□ -0.55
SLC46A1-201ENST00000578217 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 A0A0G2JLW4 131 aa11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 ZCRB1Q8TBF4 217 aaKnown RBP11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 PALLDQ8WX93 1383 aa11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
SLC46A1-201ENST00000578217 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
SLC46A1-201ENST00000578217 IP6K1Q92551 441 aa11.61□□□□□ -0.55
SLC46A1-201ENST00000578217 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
SLC46A1-201ENST00000578217 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
SLC46A1-201ENST00000578217 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
SLC46A1-201ENST00000578217 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
SLC46A1-201ENST00000578217 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
SLC46A1-201ENST00000578217 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
SLC46A1-201ENST00000578217 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
SLC46A1-201ENST00000578217 MMP10P09238 476 aa11.59□□□□□ -0.55
SLC46A1-201ENST00000578217 FSTL1Q12841 308 aa11.59□□□□□ -0.55
SLC46A1-201ENST00000578217 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
SLC46A1-201ENST00000578217 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
SLC46A1-201ENST00000578217 PKD1L3Q7Z443 1732 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 DPEP1P16444 411 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 AK7Q96M32 723 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 ITGB4P16144 1822 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
SLC46A1-201ENST00000578217 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
SLC46A1-201ENST00000578217 KCNA3P22001 575 aa11.57□□□□□ -0.56
SLC46A1-201ENST00000578217 NBPF6Q5VWK0 638 aa11.57□□□□□ -0.56
SLC46A1-201ENST00000578217 MPRIPQ6WCQ1 1025 aa11.57□□□□□ -0.56
SLC46A1-201ENST00000578217 NBPF4Q96M43 638 aa11.57□□□□□ -0.56
SLC46A1-201ENST00000578217 PYGBP11216 843 aa11.56□□□□□ -0.56
SLC46A1-201ENST00000578217 HOXC9P31274 260 aa11.56□□□□□ -0.56
SLC46A1-201ENST00000578217 ITPK1Q13572 414 aa11.56□□□□□ -0.56
SLC46A1-201ENST00000578217 C10orf71Q711Q0 1435 aa11.56□□□□□ -0.56
SLC46A1-201ENST00000578217 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
SLC46A1-201ENST00000578217 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
SLC46A1-201ENST00000578217 SBF1O95248 1867 aa11.55□□□□□ -0.56
SLC46A1-201ENST00000578217 CYP27B1O15528 508 aa11.55□□□□□ -0.56
SLC46A1-201ENST00000578217 PIGBQ92521 554 aa11.55□□□□□ -0.56
SLC46A1-201ENST00000578217 FCHSD2O94868 740 aa11.54□□□□□ -0.56
SLC46A1-201ENST00000578217 SSFA2P28290 1259 aa11.54□□□□□ -0.56
SLC46A1-201ENST00000578217 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
SLC46A1-201ENST00000578217 NSD3Q9BZ95 1437 aa11.53□□□□□ -0.56
SLC46A1-201ENST00000578217 GNPATO15228 680 aa11.53□□□□□ -0.56
SLC46A1-201ENST00000578217 MAP3K13O43283 966 aa11.53□□□□□ -0.56
SLC46A1-201ENST00000578217 RNF181Q9P0P0 153 aa11.53□□□□□ -0.56
SLC46A1-201ENST00000578217 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
SLC46A1-201ENST00000578217 TNRC6CQ9HCJ0 1690 aaKnown RBP11.52□□□□□ -0.56
SLC46A1-201ENST00000578217 EDC4Q6P2E9 1401 aaKnown RBP11.52□□□□□ -0.56
SLC46A1-201ENST00000578217 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
SLC46A1-201ENST00000578217 TGFB2P61812 414 aa11.52□□□□□ -0.57
SLC46A1-201ENST00000578217 SMC1BQ8NDV3 1235 aa11.52□□□□□ -0.57
SLC46A1-201ENST00000578217 PLEKHG2Q9H7P9 1386 aa11.52□□□□□ -0.57
SLC46A1-201ENST00000578217 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 FOXN1O15353 648 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 SIK1P57059 783 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 DCAF5Q96JK2 942 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 C4AP0C0L4 1744 aa11.51□□□□□ -0.57
SLC46A1-201ENST00000578217 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 AMPHP49418 695 aa11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
SLC46A1-201ENST00000578217 RASSF7Q02833 373 aa11.49□□□□□ -0.57
SLC46A1-201ENST00000578217 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
SLC46A1-201ENST00000578217 SLC4A9Q96Q91 983 aa11.49□□□□□ -0.57
SLC46A1-201ENST00000578217 POTECB2RU33 542 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 GYS1P13807 737 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 CHRNA5P30532 468 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 SMARCC1Q92922 1105 aaPredicted RBP11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 PCDH11XQ9BZA7 1347 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 PCDH11YQ9BZA8 1340 aa11.48□□□□□ -0.57
SLC46A1-201ENST00000578217 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms